RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
CMTM1-215ENST00000531885 HECW1Q76N89 1606 aa19.15■□□□□ 0.66
CMTM1-215ENST00000531885 FER1L4A9Z1Z3 1794 aa19.15■□□□□ 0.66
CMTM1-215ENST00000531885 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
CMTM1-215ENST00000531885 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
CMTM1-215ENST00000531885 HSPA2P54652 639 aa19.14■□□□□ 0.65
CMTM1-215ENST00000531885 MYO5CQ9NQX4 1742 aa19.12■□□□□ 0.65
CMTM1-215ENST00000531885 C9orf84Q5VXU9 1444 aa19.11■□□□□ 0.65
CMTM1-215ENST00000531885 ATP10AO60312 1499 aa19.1■□□□□ 0.65
CMTM1-215ENST00000531885 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
CMTM1-215ENST00000531885 KIF14Q15058 1648 aa19.09■□□□□ 0.65
CMTM1-215ENST00000531885 CLIP1P30622 1438 aa19.08■□□□□ 0.65
CMTM1-215ENST00000531885 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
CMTM1-215ENST00000531885 ZNF518AQ6AHZ1 1483 aa19.08■□□□□ 0.64
CMTM1-215ENST00000531885 SIGLEC1Q9BZZ2 1709 aa19.07■□□□□ 0.64
CMTM1-215ENST00000531885 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
CMTM1-215ENST00000531885 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
CMTM1-215ENST00000531885 CERKQ8TCT0 537 aa19.04■□□□□ 0.64
CMTM1-215ENST00000531885 PREX1Q8TCU6 1659 aa19.04■□□□□ 0.64
CMTM1-215ENST00000531885 TROQ12816 1431 aaPredicted RBP19.03■□□□□ 0.64
CMTM1-215ENST00000531885 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
CMTM1-215ENST00000531885 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.63
CMTM1-215ENST00000531885 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
CMTM1-215ENST00000531885 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
CMTM1-215ENST00000531885 AFAP1Q8N556 730 aa18.98■□□□□ 0.63
CMTM1-215ENST00000531885 KDM5CP41229 1560 aa18.98■□□□□ 0.63
CMTM1-215ENST00000531885 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
CMTM1-215ENST00000531885 SETD1BQ9UPS6 1966 aaKnown RBP18.96■□□□□ 0.63
CMTM1-215ENST00000531885 CCDC18Q5T9S5 1454 aa18.94■□□□□ 0.62
CMTM1-215ENST00000531885 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
CMTM1-215ENST00000531885 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
CMTM1-215ENST00000531885 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
CMTM1-215ENST00000531885 CDC42BPBQ9Y5S2 1711 aa18.9■□□□□ 0.62
CMTM1-215ENST00000531885 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
CMTM1-215ENST00000531885 ABCA6Q8N139 1617 aa18.89■□□□□ 0.61
CMTM1-215ENST00000531885 ABCC1P33527 1531 aa18.88■□□□□ 0.61
CMTM1-215ENST00000531885 LRRIQ1Q96JM4 1722 aa18.88■□□□□ 0.61
CMTM1-215ENST00000531885 AGLP35573 1532 aa18.87■□□□□ 0.61
CMTM1-215ENST00000531885 CASKIN1Q8WXD9 1431 aa18.87■□□□□ 0.61
CMTM1-215ENST00000531885 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
CMTM1-215ENST00000531885 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
CMTM1-215ENST00000531885 C3P01024 1663 aa18.85■□□□□ 0.61
CMTM1-215ENST00000531885 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
CMTM1-215ENST00000531885 TRAPPC8Q9Y2L5 1435 aa18.84■□□□□ 0.61
CMTM1-215ENST00000531885 PTPRTO14522 1441 aa18.83■□□□□ 0.61
CMTM1-215ENST00000531885 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
CMTM1-215ENST00000531885 ZNF777Q9ULD5 760 aaPredicted RBP18.82■□□□□ 0.6
CMTM1-215ENST00000531885 FYCO1Q9BQS8 1478 aa18.81■□□□□ 0.6
CMTM1-215ENST00000531885 DISP3Q9P2K9 1392 aa18.81■□□□□ 0.6
CMTM1-215ENST00000531885 CDC42BPAQ5VT25 1732 aa18.8■□□□□ 0.6
CMTM1-215ENST00000531885 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
CMTM1-215ENST00000531885 SPAG9O60271 1321 aaKnown RBP18.78■□□□□ 0.6
CMTM1-215ENST00000531885 NPATQ14207 1427 aa18.76■□□□□ 0.59
CMTM1-215ENST00000531885 SAMD9LQ8IVG5 1584 aa18.76■□□□□ 0.59
CMTM1-215ENST00000531885 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
CMTM1-215ENST00000531885 PLEKHH2Q8IVE3 1493 aa18.75■□□□□ 0.59
CMTM1-215ENST00000531885 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
CMTM1-215ENST00000531885 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
CMTM1-215ENST00000531885 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
CMTM1-215ENST00000531885 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
CMTM1-215ENST00000531885 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
CMTM1-215ENST00000531885 ZMYM3Q14202 1370 aa18.71■□□□□ 0.59
CMTM1-215ENST00000531885 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
CMTM1-215ENST00000531885 GPATCH8Q9UKJ3 1502 aaKnown RBP18.71■□□□□ 0.59
CMTM1-215ENST00000531885 HNRNPMP52272 730 aaKnown RBP eCLIP18.71■□□□□ 0.59
CMTM1-215ENST00000531885 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.58
CMTM1-215ENST00000531885 ATP7AQ04656 1500 aa18.7■□□□□ 0.58
CMTM1-215ENST00000531885 KIAA1107Q9UPP5 1409 aa18.7■□□□□ 0.58
CMTM1-215ENST00000531885 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
CMTM1-215ENST00000531885 A2MP01023 1474 aa18.68■□□□□ 0.58
CMTM1-215ENST00000531885 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
CMTM1-215ENST00000531885 SPATA31D1Q6ZQQ2 1576 aa18.67■□□□□ 0.58
CMTM1-215ENST00000531885 CLTCQ00610 1675 aaKnown RBP18.66■□□□□ 0.58
CMTM1-215ENST00000531885 SOCS7O14512 581 aa18.66■□□□□ 0.58
CMTM1-215ENST00000531885 PKD2Q13563 968 aa18.66■□□□□ 0.58
CMTM1-215ENST00000531885 GGT6Q6P531 493 aa18.66■□□□□ 0.58
CMTM1-215ENST00000531885 INO80Q9ULG1 1556 aaPredicted RBP18.65■□□□□ 0.58
CMTM1-215ENST00000531885 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
CMTM1-215ENST00000531885 PLXNC1O60486 1568 aa18.64■□□□□ 0.58
CMTM1-215ENST00000531885 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
CMTM1-215ENST00000531885 PLA2R1Q13018 1463 aa18.63■□□□□ 0.57
CMTM1-215ENST00000531885 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
CMTM1-215ENST00000531885 ILDR2Q71H61 639 aa18.62■□□□□ 0.57
CMTM1-215ENST00000531885 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
CMTM1-215ENST00000531885 ZNF142P52746 1687 aaPredicted RBP18.62■□□□□ 0.57
CMTM1-215ENST00000531885 ADGBQ8N7X0 1667 aa18.62■□□□□ 0.57
CMTM1-215ENST00000531885 UBAP1LF5GYI3 381 aa18.6■□□□□ 0.57
CMTM1-215ENST00000531885 PTPRKQ15262 1439 aa18.59■□□□□ 0.57
CMTM1-215ENST00000531885 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.57
CMTM1-215ENST00000531885 EHBP1L1Q8N3D4 1523 aa18.57■□□□□ 0.56
CMTM1-215ENST00000531885 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
CMTM1-215ENST00000531885 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
CMTM1-215ENST00000531885 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
CMTM1-215ENST00000531885 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
CMTM1-215ENST00000531885 DHX29Q7Z478 1369 aaKnown RBP18.52■□□□□ 0.55
CMTM1-215ENST00000531885 ZNF644Q9H582 1327 aaPredicted RBP18.51■□□□□ 0.55
CMTM1-215ENST00000531885 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
CMTM1-215ENST00000531885 KIF3BO15066 747 aa18.5■□□□□ 0.55
CMTM1-215ENST00000531885 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
CMTM1-215ENST00000531885 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms