RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 CDK11AQ9UQ88 783 aaPredicted RBP31.56■■■□□ 2.64
UBXN1-212ENST00000531625 ARHGAP35Q9NRY4 1499 aa31.55■■■□□ 2.64
UBXN1-212ENST00000531625 EFCAB2Q5VUJ9 269 aa31.55■■■□□ 2.64
UBXN1-212ENST00000531625 ATP1B4Q9UN42 357 aaPredicted RBP31.54■■■□□ 2.64
UBXN1-212ENST00000531625 ATP10AO60312 1499 aa31.5■■■□□ 2.63
UBXN1-212ENST00000531625 MYO5CQ9NQX4 1742 aa31.49■■■□□ 2.63
UBXN1-212ENST00000531625 HSPA2P54652 639 aa31.49■■■□□ 2.63
UBXN1-212ENST00000531625 MLECQ14165 292 aa31.48■■■□□ 2.63
UBXN1-212ENST00000531625 EHMT2Q96KQ7 1210 aa31.48■■■□□ 2.63
UBXN1-212ENST00000531625 PLPPR3Q6T4P5 718 aa31.46■■■□□ 2.63
UBXN1-212ENST00000531625 TROQ12816 1431 aaPredicted RBP31.46■■■□□ 2.63
UBXN1-212ENST00000531625 C9orf84Q5VXU9 1444 aa31.46■■■□□ 2.63
UBXN1-212ENST00000531625 FER1L4A9Z1Z3 1794 aa31.45■■■□□ 2.63
UBXN1-212ENST00000531625 ARHGEF12Q9NZN5 1544 aa31.44■■■□□ 2.62
UBXN1-212ENST00000531625 KIF14Q15058 1648 aa31.43■■■□□ 2.62
UBXN1-212ENST00000531625 ZNF518AQ6AHZ1 1483 aa31.42■■■□□ 2.62
UBXN1-212ENST00000531625 CLIP1P30622 1438 aa31.41■■■□□ 2.62
UBXN1-212ENST00000531625 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
UBXN1-212ENST00000531625 ARHGAP5Q13017 1502 aa31.37■■■□□ 2.61
UBXN1-212ENST00000531625 KDM5CP41229 1560 aa31.36■■■□□ 2.61
UBXN1-212ENST00000531625 AFAP1Q8N556 730 aa31.35■■■□□ 2.61
UBXN1-212ENST00000531625 LRRIQ1Q96JM4 1722 aa31.31■■■□□ 2.6
UBXN1-212ENST00000531625 CEBPAP49715 358 aaPredicted RBP31.27■■■□□ 2.6
UBXN1-212ENST00000531625 PREX1Q8TCU6 1659 aa31.27■■■□□ 2.6
UBXN1-212ENST00000531625 REREQ9P2R6 1566 aa31.26■■■□□ 2.6
UBXN1-212ENST00000531625 CDC42BPBQ9Y5S2 1711 aa31.26■■■□□ 2.59
UBXN1-212ENST00000531625 MLH3Q9UHC1 1453 aa31.26■■■□□ 2.59
UBXN1-212ENST00000531625 CASKIN1Q8WXD9 1431 aa31.25■■■□□ 2.59
UBXN1-212ENST00000531625 CERKQ8TCT0 537 aa31.25■■■□□ 2.59
UBXN1-212ENST00000531625 DIP2CQ9Y2E4 1556 aa31.25■■■□□ 2.59
UBXN1-212ENST00000531625 CCDC18Q5T9S5 1454 aa31.24■■■□□ 2.59
UBXN1-212ENST00000531625 SETD1BQ9UPS6 1966 aaKnown RBP31.24■■■□□ 2.59
UBXN1-212ENST00000531625 MYT1LQ9UL68 1186 aa31.23■■■□□ 2.59
UBXN1-212ENST00000531625 PREX2Q70Z35 1606 aa31.2■■■□□ 2.59
UBXN1-212ENST00000531625 ABCC1P33527 1531 aa31.19■■■□□ 2.58
UBXN1-212ENST00000531625 TRAPPC8Q9Y2L5 1435 aa31.18■■■□□ 2.58
UBXN1-212ENST00000531625 ABCA6Q8N139 1617 aa31.17■■■□□ 2.58
UBXN1-212ENST00000531625 AGLP35573 1532 aa31.17■■■□□ 2.58
UBXN1-212ENST00000531625 UHRF1BP1Q6BDS2 1440 aa31.16■■■□□ 2.58
UBXN1-212ENST00000531625 DMRT2Q9Y5R5 561 aa31.16■■■□□ 2.58
UBXN1-212ENST00000531625 ITSN2Q9NZM3 1697 aa31.13■■■□□ 2.57
UBXN1-212ENST00000531625 STRCQ7RTU9 1775 aa31.1■■■□□ 2.57
UBXN1-212ENST00000531625 FYCO1Q9BQS8 1478 aa31.09■■■□□ 2.57
UBXN1-212ENST00000531625 CDC42BPAQ5VT25 1732 aa31.08■■■□□ 2.57
UBXN1-212ENST00000531625 ESF1Q9H501 851 aaKnown RBP31.08■■■□□ 2.57
UBXN1-212ENST00000531625 KIDINS220Q9ULH0 1771 aa31.07■■■□□ 2.56
UBXN1-212ENST00000531625 C3P01024 1663 aa31.06■■■□□ 2.56
UBXN1-212ENST00000531625 CNTLNQ9NXG0 1405 aa31.04■■■□□ 2.56
UBXN1-212ENST00000531625 SAMD9LQ8IVG5 1584 aa31■■■□□ 2.55
UBXN1-212ENST00000531625 PTPRTO14522 1441 aa30.99■■■□□ 2.55
UBXN1-212ENST00000531625 GPATCH8Q9UKJ3 1502 aaKnown RBP30.99■■■□□ 2.55
UBXN1-212ENST00000531625 ZNF777Q9ULD5 760 aaPredicted RBP30.97■■■□□ 2.55
UBXN1-212ENST00000531625 SPAG9O60271 1321 aaKnown RBP30.95■■■□□ 2.54
UBXN1-212ENST00000531625 SYCP2Q9BX26 1530 aa30.94■■■□□ 2.54
UBXN1-212ENST00000531625 KIAA1107Q9UPP5 1409 aa30.93■■■□□ 2.54
UBXN1-212ENST00000531625 HNRNPMP52272 730 aaKnown RBP eCLIP30.92■■■□□ 2.54
UBXN1-212ENST00000531625 NPATQ14207 1427 aa30.91■■■□□ 2.54
UBXN1-212ENST00000531625 PLEKHH2Q8IVE3 1493 aa30.9■■■□□ 2.54
UBXN1-212ENST00000531625 MROH2AA6NES4 1674 aa30.89■■■□□ 2.54
UBXN1-212ENST00000531625 CFDP1Q9UEE9 299 aaPredicted RBP30.88■■■□□ 2.53
UBXN1-212ENST00000531625 NCOA1Q15788 1441 aa30.88■■■□□ 2.53
UBXN1-212ENST00000531625 ZMYM3Q14202 1370 aa30.87■■■□□ 2.53
UBXN1-212ENST00000531625 CCNB3Q8WWL7 1395 aa30.86■■■□□ 2.53
UBXN1-212ENST00000531625 ATP7AQ04656 1500 aa30.86■■■□□ 2.53
UBXN1-212ENST00000531625 PLXNC1O60486 1568 aa30.83■■■□□ 2.53
UBXN1-212ENST00000531625 INO80Q9ULG1 1556 aaPredicted RBP30.83■■■□□ 2.53
UBXN1-212ENST00000531625 A2MP01023 1474 aa30.82■■■□□ 2.52
UBXN1-212ENST00000531625 SUPT6HQ7KZ85 1726 aaKnown RBP30.81■■■□□ 2.52
UBXN1-212ENST00000531625 LTBP4Q8N2S1 1624 aa30.81■■■□□ 2.52
UBXN1-212ENST00000531625 MTUS2Q5JR59 1369 aa30.8■■■□□ 2.52
UBXN1-212ENST00000531625 CAMSAP1Q5T5Y3 1602 aa30.77■■■□□ 2.52
UBXN1-212ENST00000531625 IQSEC2Q5JU85 1478 aa30.76■■■□□ 2.52
UBXN1-212ENST00000531625 PPP6R1Q9UPN7 881 aa30.75■■■□□ 2.51
UBXN1-212ENST00000531625 CLTCQ00610 1675 aaKnown RBP30.73■■■□□ 2.51
UBXN1-212ENST00000531625 PTPRKQ15262 1439 aa30.72■■■□□ 2.51
UBXN1-212ENST00000531625 GGT6Q6P531 493 aa30.71■■■□□ 2.51
UBXN1-212ENST00000531625 TIAM1Q13009 1591 aa30.69■■■□□ 2.5
UBXN1-212ENST00000531625 ZNF644Q9H582 1327 aaPredicted RBP30.69■■■□□ 2.5
UBXN1-212ENST00000531625 MBD5Q9P267 1494 aa30.69■■■□□ 2.5
UBXN1-212ENST00000531625 ADGBQ8N7X0 1667 aa30.68■■■□□ 2.5
UBXN1-212ENST00000531625 DISP3Q9P2K9 1392 aa30.68■■■□□ 2.5
UBXN1-212ENST00000531625 PLA2R1Q13018 1463 aa30.68■■■□□ 2.5
UBXN1-212ENST00000531625 ZNF142P52746 1687 aaPredicted RBP30.68■■■□□ 2.5
UBXN1-212ENST00000531625 EHBP1L1Q8N3D4 1523 aa30.68■■■□□ 2.5
UBXN1-212ENST00000531625 PKD2Q13563 968 aa30.67■■■□□ 2.5
UBXN1-212ENST00000531625 NCKAP5LQ9HCH0 1330 aa30.67■■■□□ 2.5
UBXN1-212ENST00000531625 RTEL1-TNFRSF6BF6WH68 1400 aa30.66■■■□□ 2.5
UBXN1-212ENST00000531625 MYO3AQ8NEV4 1616 aa30.65■■■□□ 2.5
UBXN1-212ENST00000531625 CEP162Q5TB80 1403 aa30.65■■■□□ 2.5
UBXN1-212ENST00000531625 CEP170BQ9Y4F5 1589 aaPredicted RBP30.64■■■□□ 2.5
UBXN1-212ENST00000531625 TCOF1Q13428 1488 aaKnown RBP30.63■■■□□ 2.49
UBXN1-212ENST00000531625 DHX29Q7Z478 1369 aaKnown RBP30.61■■■□□ 2.49
UBXN1-212ENST00000531625 ZNF335Q9H4Z2 1342 aaPredicted RBP30.58■■■□□ 2.49
UBXN1-212ENST00000531625 ILDR2Q71H61 639 aa30.58■■■□□ 2.49
UBXN1-212ENST00000531625 A2ML1A8K2U0 1454 aa30.54■■■□□ 2.48
UBXN1-212ENST00000531625 RSPH4AQ5TD94 716 aa30.53■■■□□ 2.48
UBXN1-212ENST00000531625 CCDC141Q6ZP82 1450 aa30.51■■■□□ 2.48
UBXN1-212ENST00000531625 SPATA31D1Q6ZQQ2 1576 aa30.49■■■□□ 2.47
UBXN1-212ENST00000531625 FAM135AQ9P2D6 1515 aa30.49■■■□□ 2.47
UBXN1-212ENST00000531625 SOCS7O14512 581 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms