RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 TMEM51Q9NW97 253 aa11.58□□□□□ -0.56
CAPRIN1-209ENST00000530820 JARID2Q92833 1246 aaPredicted RBP11.57□□□□□ -0.56
CAPRIN1-209ENST00000530820 TSC1Q92574 1164 aa11.57□□□□□ -0.56
CAPRIN1-209ENST00000530820 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
CAPRIN1-209ENST00000530820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.56□□□□□ -0.56
CAPRIN1-209ENST00000530820 XRCC6P12956 609 aaKnown RBP eCLIP11.56□□□□□ -0.56
CAPRIN1-209ENST00000530820 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
CAPRIN1-209ENST00000530820 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
CAPRIN1-209ENST00000530820 RSPH4AQ5TD94 716 aa11.55□□□□□ -0.56
CAPRIN1-209ENST00000530820 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
CAPRIN1-209ENST00000530820 EP400NLQ6ZTU2 488 aa11.54□□□□□ -0.56
CAPRIN1-209ENST00000530820 MPNDQ8N594 471 aa11.54□□□□□ -0.56
CAPRIN1-209ENST00000530820 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
CAPRIN1-209ENST00000530820 GOLGA6L3A6NEY3 463 aa11.54□□□□□ -0.56
CAPRIN1-209ENST00000530820 ERBB4Q15303 1308 aa11.53□□□□□ -0.56
CAPRIN1-209ENST00000530820 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
CAPRIN1-209ENST00000530820 TMED8Q6PL24 325 aaPredicted RBP11.53□□□□□ -0.56
CAPRIN1-209ENST00000530820 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.56
CAPRIN1-209ENST00000530820 ESPNB1AK53 854 aa11.52□□□□□ -0.56
CAPRIN1-209ENST00000530820 NGEFQ8N5V2 710 aa11.52□□□□□ -0.56
CAPRIN1-209ENST00000530820 EXOC6Q8TAG9 804 aa11.52□□□□□ -0.57
CAPRIN1-209ENST00000530820 AKNAQ7Z591 1439 aa11.52□□□□□ -0.57
CAPRIN1-209ENST00000530820 CLCN1P35523 988 aa11.51□□□□□ -0.57
CAPRIN1-209ENST00000530820 MLECQ14165 292 aa11.51□□□□□ -0.57
CAPRIN1-209ENST00000530820 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
CAPRIN1-209ENST00000530820 PLIN1O60240 522 aa11.49□□□□□ -0.57
CAPRIN1-209ENST00000530820 TNNT1P13805 278 aa11.49□□□□□ -0.57
CAPRIN1-209ENST00000530820 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
CAPRIN1-209ENST00000530820 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
CAPRIN1-209ENST00000530820 TMX1Q9H3N1 280 aa11.47□□□□□ -0.57
CAPRIN1-209ENST00000530820 KCNJ4P48050 445 aa11.46□□□□□ -0.57
CAPRIN1-209ENST00000530820 BACH2Q9BYV9 841 aa11.46□□□□□ -0.58
CAPRIN1-209ENST00000530820 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
CAPRIN1-209ENST00000530820 ZNF771Q7L3S4 317 aaPredicted RBP11.45□□□□□ -0.58
CAPRIN1-209ENST00000530820 RIPK4P57078 832 aa11.44□□□□□ -0.58
CAPRIN1-209ENST00000530820 XPCQ01831 940 aaPredicted RBP11.44□□□□□ -0.58
CAPRIN1-209ENST00000530820 UQCRHLA0A096LP55 91 aa11.44□□□□□ -0.58
CAPRIN1-209ENST00000530820 UQCRHP07919 91 aa11.44□□□□□ -0.58
CAPRIN1-209ENST00000530820 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
CAPRIN1-209ENST00000530820 PPP1R15AO75807 674 aaPredicted RBP11.41□□□□□ -0.58
CAPRIN1-209ENST00000530820 NCLP19338 710 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-209ENST00000530820 TPM2P07951 284 aa11.4□□□□□ -0.58
CAPRIN1-209ENST00000530820 HDAC5Q9UQL6 1122 aa11.4□□□□□ -0.58
CAPRIN1-209ENST00000530820 MSNP26038 577 aaKnown RBP11.4□□□□□ -0.59
CAPRIN1-209ENST00000530820 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
CAPRIN1-209ENST00000530820 CCER2I3L3R5 266 aa11.39□□□□□ -0.59
CAPRIN1-209ENST00000530820 SLC52A1Q9NWF4 448 aa11.39□□□□□ -0.59
CAPRIN1-209ENST00000530820 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
CAPRIN1-209ENST00000530820 TEX2Q8IWB9 1127 aa11.38□□□□□ -0.59
CAPRIN1-209ENST00000530820 TRIM34Q9BYJ4 488 aa11.38□□□□□ -0.59
CAPRIN1-209ENST00000530820 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
CAPRIN1-209ENST00000530820 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
CAPRIN1-209ENST00000530820 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-209ENST00000530820 SMAP1Q8IYB5 467 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-209ENST00000530820 TNNT3P45378 269 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-209ENST00000530820 FAM193AP78312 1265 aa11.34□□□□□ -0.59
CAPRIN1-209ENST00000530820 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
CAPRIN1-209ENST00000530820 DMTNQ08495 405 aa11.34□□□□□ -0.59
CAPRIN1-209ENST00000530820 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
CAPRIN1-209ENST00000530820 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-209ENST00000530820 DHX57Q6P158 1386 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-209ENST00000530820 FAM43BQ6ZT52 329 aaPredicted RBP11.32□□□□□ -0.6
CAPRIN1-209ENST00000530820 LOC102724159A0A0B4J2E5 919 aa11.32□□□□□ -0.6
CAPRIN1-209ENST00000530820 PWP2Q15269 919 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-209ENST00000530820 GPATCH11Q8N954 259 aa11.32□□□□□ -0.6
CAPRIN1-209ENST00000530820 ABCC9O60706 1549 aa11.31□□□□□ -0.6
CAPRIN1-209ENST00000530820 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
CAPRIN1-209ENST00000530820 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-209ENST00000530820 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-209ENST00000530820 PTMSP20962 102 aa11.29□□□□□ -0.6
CAPRIN1-209ENST00000530820 TRAK2O60296 914 aa11.28□□□□□ -0.6
CAPRIN1-209ENST00000530820 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
CAPRIN1-209ENST00000530820 PANK3Q9H999 370 aa11.26□□□□□ -0.61
CAPRIN1-209ENST00000530820 RGL3Q3MIN7 710 aa11.25□□□□□ -0.61
CAPRIN1-209ENST00000530820 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
CAPRIN1-209ENST00000530820 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
CAPRIN1-209ENST00000530820 GAS2L3Q86XJ1 694 aa11.24□□□□□ -0.61
CAPRIN1-209ENST00000530820 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
CAPRIN1-209ENST00000530820 PTMAP06454 111 aaKnown RBP11.22□□□□□ -0.61
CAPRIN1-209ENST00000530820 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.614e-9■■□□□ 14.1
CAPRIN1-209ENST00000530820 STK26Q9P289 416 aa11.22□□□□□ -0.61
CAPRIN1-209ENST00000530820 MRE11P49959 708 aa11.22□□□□□ -0.61
CAPRIN1-209ENST00000530820 CRBNQ96SW2 442 aa11.22□□□□□ -0.61
CAPRIN1-209ENST00000530820 CENPJQ9HC77 1338 aaPredicted RBP11.22□□□□□ -0.61
CAPRIN1-209ENST00000530820 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
CAPRIN1-209ENST00000530820 FAM50AQ14320 339 aaKnown RBP11.21□□□□□ -0.61
CAPRIN1-209ENST00000530820 C17orf53Q8N3J3 647 aaPredicted RBP11.21□□□□□ -0.61
CAPRIN1-209ENST00000530820 NUDCQ9Y266 331 aa11.21□□□□□ -0.61
CAPRIN1-209ENST00000530820 CCDC94Q9BW85 323 aaPredicted RBP11.21□□□□□ -0.62
CAPRIN1-209ENST00000530820 SEC24BO95487 1268 aa11.21□□□□□ -0.62
CAPRIN1-209ENST00000530820 PLCB2Q00722 1185 aa11.21□□□□□ -0.62
CAPRIN1-209ENST00000530820 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-209ENST00000530820 NACADO15069 1562 aa11.2□□□□□ -0.62
CAPRIN1-209ENST00000530820 BECN1Q14457 450 aa11.19□□□□□ -0.62
CAPRIN1-209ENST00000530820 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
CAPRIN1-209ENST00000530820 ZBTB12Q9Y330 459 aaPredicted RBP11.19□□□□□ -0.62
CAPRIN1-209ENST00000530820 RNF214Q8ND24 703 aa11.18□□□□□ -0.62
CAPRIN1-209ENST00000530820 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
CAPRIN1-209ENST00000530820 OFD1O75665 1012 aa11.18□□□□□ -0.62
CAPRIN1-209ENST00000530820 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms