RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 HSPA2P54652 639 aa9.05□□□□□ -0.96
VPS11-204ENST00000530809 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
VPS11-204ENST00000530809 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
VPS11-204ENST00000530809 STRCQ7RTU9 1775 aa9.04□□□□□ -0.96
VPS11-204ENST00000530809 ARHGEF12Q9NZN5 1544 aa9.04□□□□□ -0.96
VPS11-204ENST00000530809 PLEKHD1A6NEE1 506 aa9.03□□□□□ -0.96
VPS11-204ENST00000530809 YEATS2Q9ULM3 1422 aa9.03□□□□□ -0.96
VPS11-204ENST00000530809 SPATA31D1Q6ZQQ2 1576 aa9.03□□□□□ -0.96
VPS11-204ENST00000530809 DISP3Q9P2K9 1392 aa9.02□□□□□ -0.97
VPS11-204ENST00000530809 SOCS7O14512 581 aa9.02□□□□□ -0.97
VPS11-204ENST00000530809 PIAS4Q8N2W9 510 aaPredicted RBP9.02□□□□□ -0.97
VPS11-204ENST00000530809 DMRT2Q9Y5R5 561 aa9.02□□□□□ -0.97
VPS11-204ENST00000530809 C9orf84Q5VXU9 1444 aa9.01□□□□□ -0.97
VPS11-204ENST00000530809 ATP10AO60312 1499 aa9□□□□□ -0.97
VPS11-204ENST00000530809 UHRF1BP1Q6BDS2 1440 aa8.99□□□□□ -0.97
VPS11-204ENST00000530809 IQSEC2Q5JU85 1478 aa8.99□□□□□ -0.97
VPS11-204ENST00000530809 C3P01024 1663 aa8.99□□□□□ -0.97
VPS11-204ENST00000530809 REREQ9P2R6 1566 aa8.99□□□□□ -0.97
VPS11-204ENST00000530809 PLCH2O75038 1416 aa8.98□□□□□ -0.97
VPS11-204ENST00000530809 SCAPERQ9BY12 1400 aa8.98□□□□□ -0.97
VPS11-204ENST00000530809 KDM5CP41229 1560 aa8.98□□□□□ -0.97
VPS11-204ENST00000530809 PTPRTO14522 1441 aa8.97□□□□□ -0.97
VPS11-204ENST00000530809 EEA1Q15075 1411 aa8.97□□□□□ -0.97
VPS11-204ENST00000530809 ZNF518AQ6AHZ1 1483 aa8.97□□□□□ -0.97
VPS11-204ENST00000530809 MLECQ14165 292 aa8.97□□□□□ -0.97
VPS11-204ENST00000530809 ILDR2Q71H61 639 aa8.97□□□□□ -0.97
VPS11-204ENST00000530809 KIF14Q15058 1648 aa8.96□□□□□ -0.98
VPS11-204ENST00000530809 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.98
VPS11-204ENST00000530809 CDK13Q14004 1512 aaKnown RBP8.95□□□□□ -0.98
VPS11-204ENST00000530809 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
VPS11-204ENST00000530809 MROH2AA6NES4 1674 aa8.94□□□□□ -0.98
VPS11-204ENST00000530809 LTBP4Q8N2S1 1624 aa8.94□□□□□ -0.98
VPS11-204ENST00000530809 SUPT6HQ7KZ85 1726 aaKnown RBP8.94□□□□□ -0.98
VPS11-204ENST00000530809 EFCAB2Q5VUJ9 269 aa8.93□□□□□ -0.98
VPS11-204ENST00000530809 AGLP35573 1532 aa8.93□□□□□ -0.98
VPS11-204ENST00000530809 ABCA6Q8N139 1617 aa8.93□□□□□ -0.98
VPS11-204ENST00000530809 CDC42BPBQ9Y5S2 1711 aa8.93□□□□□ -0.98
VPS11-204ENST00000530809 ARHGAP5Q13017 1502 aa8.92□□□□□ -0.98
VPS11-204ENST00000530809 ITSN2Q9NZM3 1697 aa8.91□□□□□ -0.98
VPS11-204ENST00000530809 PREX2Q70Z35 1606 aa8.91□□□□□ -0.98
VPS11-204ENST00000530809 FMN1Q68DA7 1419 aa8.91□□□□□ -0.98
VPS11-204ENST00000530809 CEBPAP49715 358 aaPredicted RBP8.91□□□□□ -0.98
VPS11-204ENST00000530809 CDK11AQ9UQ88 783 aaPredicted RBP8.91□□□□□ -0.98
VPS11-204ENST00000530809 ZNF142P52746 1687 aaPredicted RBP8.91□□□□□ -0.98
VPS11-204ENST00000530809 MLH3Q9UHC1 1453 aa8.9□□□□□ -0.98
VPS11-204ENST00000530809 CLIP1P30622 1438 aa8.9□□□□□ -0.98
VPS11-204ENST00000530809 CNTLNQ9NXG0 1405 aa8.9□□□□□ -0.98
VPS11-204ENST00000530809 TRAPPC8Q9Y2L5 1435 aa8.9□□□□□ -0.98
VPS11-204ENST00000530809 LRRIQ1Q96JM4 1722 aa8.9□□□□□ -0.98
VPS11-204ENST00000530809 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
VPS11-204ENST00000530809 RANGAP1P46060 587 aaPredicted RBP8.89□□□□□ -0.99
VPS11-204ENST00000530809 ESF1Q9H501 851 aaKnown RBP8.89□□□□□ -0.99
VPS11-204ENST00000530809 KIDINS220Q9ULH0 1771 aa8.89□□□□□ -0.99
VPS11-204ENST00000530809 ABCC1P33527 1531 aa8.88□□□□□ -0.99
VPS11-204ENST00000530809 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
VPS11-204ENST00000530809 NPATQ14207 1427 aa8.88□□□□□ -0.99
VPS11-204ENST00000530809 CAMSAP1Q5T5Y3 1602 aa8.87□□□□□ -0.99
VPS11-204ENST00000530809 MYT1LQ9UL68 1186 aa8.87□□□□□ -0.99
VPS11-204ENST00000530809 CDC42BPAQ5VT25 1732 aa8.86□□□□□ -0.99
VPS11-204ENST00000530809 MYO3AQ8NEV4 1616 aa8.86□□□□□ -0.99
VPS11-204ENST00000530809 AFAP1Q8N556 730 aa8.85□□□□□ -0.99
VPS11-204ENST00000530809 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
VPS11-204ENST00000530809 POLR1AO95602 1720 aaPredicted RBP8.84□□□□□ -0.99
VPS11-204ENST00000530809 CLTCQ00610 1675 aaKnown RBP8.84□□□□□ -0.99
VPS11-204ENST00000530809 CEP170BQ9Y4F5 1589 aaPredicted RBP8.83□□□□□ -1
VPS11-204ENST00000530809 KCNA4P22459 653 aa8.83□□□□□ -1
VPS11-204ENST00000530809 CCDC18Q5T9S5 1454 aa8.83□□□□□ -1
VPS11-204ENST00000530809 ARHGAP35Q9NRY4 1499 aa8.83□□□□□ -1
VPS11-204ENST00000530809 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
VPS11-204ENST00000530809 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
VPS11-204ENST00000530809 PKD2Q13563 968 aa8.81□□□□□ -1
VPS11-204ENST00000530809 TCOF1Q13428 1488 aaKnown RBP8.81□□□□□ -1
VPS11-204ENST00000530809 MED1Q15648 1581 aaPredicted RBP8.81□□□□□ -1
VPS11-204ENST00000530809 ADGBQ8N7X0 1667 aa8.81□□□□□ -1
VPS11-204ENST00000530809 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
VPS11-204ENST00000530809 PLXNC1O60486 1568 aa8.8□□□□□ -1
VPS11-204ENST00000530809 INO80Q9ULG1 1556 aaPredicted RBP8.8□□□□□ -1
VPS11-204ENST00000530809 ATP7AQ04656 1500 aa8.8□□□□□ -1
VPS11-204ENST00000530809 ZMYM3Q14202 1370 aa8.79□□□□□ -1
VPS11-204ENST00000530809 ZNF335Q9H4Z2 1342 aaPredicted RBP8.79□□□□□ -1
VPS11-204ENST00000530809 PPP4R3CPQ6ZMV5 832 aa8.78□□□□□ -1
VPS11-204ENST00000530809 CPS1P31327 1500 aa8.78□□□□□ -1
VPS11-204ENST00000530809 SYCP2Q9BX26 1530 aa8.78□□□□□ -1
VPS11-204ENST00000530809 DNMT1P26358 1616 aaKnown RBP8.77□□□□□ -1.01
VPS11-204ENST00000530809 UBTFP17480 764 aaKnown RBP8.77□□□□□ -1.01
VPS11-204ENST00000530809 PLEKHH2Q8IVE3 1493 aa8.77□□□□□ -1.01
VPS11-204ENST00000530809 PTPRKQ15262 1439 aa8.76□□□□□ -1.01
VPS11-204ENST00000530809 CASKIN1Q8WXD9 1431 aa8.76□□□□□ -1.01
VPS11-204ENST00000530809 NCKAP5LQ9HCH0 1330 aa8.76□□□□□ -1.01
VPS11-204ENST00000530809 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
VPS11-204ENST00000530809 A2MP01023 1474 aa8.76□□□□□ -1.01
VPS11-204ENST00000530809 FAM135AQ9P2D6 1515 aa8.75□□□□□ -1.01
VPS11-204ENST00000530809 FYCO1Q9BQS8 1478 aa8.75□□□□□ -1.01
VPS11-204ENST00000530809 SPAG9O60271 1321 aaKnown RBP8.75□□□□□ -1.01
VPS11-204ENST00000530809 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
VPS11-204ENST00000530809 TOM1O60784 492 aa8.74□□□□□ -1.01
VPS11-204ENST00000530809 NEURL4Q96JN8 1562 aa8.73□□□□□ -1.01
VPS11-204ENST00000530809 DEPDC5O75140 1603 aa8.73□□□□□ -1.01
VPS11-204ENST00000530809 GPATCH8Q9UKJ3 1502 aaKnown RBP8.72□□□□□ -1.01
VPS11-204ENST00000530809 SHANK2Q9UPX8 1470 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms