RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 RIMS1Q86UR5 1692 aaKnown RBP22.42■■□□□ 1.18
CTSB-217ENST00000530296 CASKIN1Q8WXD9 1431 aa22.42■■□□□ 1.18
CTSB-217ENST00000530296 TTC37Q6PGP7 1564 aa22.42■■□□□ 1.18
CTSB-217ENST00000530296 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
CTSB-217ENST00000530296 PLCH2O75038 1416 aa22.4■■□□□ 1.18
CTSB-217ENST00000530296 FYCO1Q9BQS8 1478 aa22.4■■□□□ 1.18
CTSB-217ENST00000530296 CCDC18Q5T9S5 1454 aa22.36■■□□□ 1.17
CTSB-217ENST00000530296 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
CTSB-217ENST00000530296 YEATS2Q9ULM3 1422 aa22.35■■□□□ 1.17
CTSB-217ENST00000530296 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
CTSB-217ENST00000530296 CDK13Q14004 1512 aaKnown RBP22.35■■□□□ 1.17
CTSB-217ENST00000530296 ATP10AO60312 1499 aa22.32■■□□□ 1.16
CTSB-217ENST00000530296 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
CTSB-217ENST00000530296 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
CTSB-217ENST00000530296 C9orf84Q5VXU9 1444 aa22.3■■□□□ 1.16
CTSB-217ENST00000530296 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
CTSB-217ENST00000530296 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
CTSB-217ENST00000530296 KIF14Q15058 1648 aa22.26■■□□□ 1.15
CTSB-217ENST00000530296 ARHGEF12Q9NZN5 1544 aa22.26■■□□□ 1.15
CTSB-217ENST00000530296 HSPA2P54652 639 aa22.25■■□□□ 1.15
CTSB-217ENST00000530296 MLECQ14165 292 aa22.25■■□□□ 1.15
CTSB-217ENST00000530296 SIGLEC1Q9BZZ2 1709 aa22.25■■□□□ 1.15
CTSB-217ENST00000530296 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
CTSB-217ENST00000530296 LRRIQ1Q96JM4 1722 aa22.23■■□□□ 1.15
CTSB-217ENST00000530296 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
CTSB-217ENST00000530296 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
CTSB-217ENST00000530296 PREX1Q8TCU6 1659 aa22.2■■□□□ 1.15
CTSB-217ENST00000530296 ARHGAP5Q13017 1502 aa22.2■■□□□ 1.14
CTSB-217ENST00000530296 KDM5CP41229 1560 aa22.2■■□□□ 1.14
CTSB-217ENST00000530296 SETD1BQ9UPS6 1966 aaKnown RBP22.19■■□□□ 1.14
CTSB-217ENST00000530296 CERKQ8TCT0 537 aa22.19■■□□□ 1.14
CTSB-217ENST00000530296 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
CTSB-217ENST00000530296 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
CTSB-217ENST00000530296 MLH3Q9UHC1 1453 aa22.14■■□□□ 1.13
CTSB-217ENST00000530296 UHRF1BP1Q6BDS2 1440 aa22.14■■□□□ 1.13
CTSB-217ENST00000530296 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
CTSB-217ENST00000530296 AFAP1Q8N556 730 aa22.13■■□□□ 1.13
CTSB-217ENST00000530296 APLP2Q06481 763 aa22.12■■□□□ 1.13
CTSB-217ENST00000530296 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
CTSB-217ENST00000530296 MAP3K1Q13233 1512 aa22.11■■□□□ 1.13
CTSB-217ENST00000530296 DIP2CQ9Y2E4 1556 aa22.09■■□□□ 1.13
CTSB-217ENST00000530296 AGLP35573 1532 aa22.09■■□□□ 1.13
CTSB-217ENST00000530296 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
CTSB-217ENST00000530296 TIAM1Q13009 1591 aa22.08■■□□□ 1.13
CTSB-217ENST00000530296 EHBP1L1Q8N3D4 1523 aa22.08■■□□□ 1.13
CTSB-217ENST00000530296 PREX2Q70Z35 1606 aa22.08■■□□□ 1.13
CTSB-217ENST00000530296 CEBPAP49715 358 aaPredicted RBP22.07■■□□□ 1.12
CTSB-217ENST00000530296 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
CTSB-217ENST00000530296 ABCC1P33527 1531 aa22.04■■□□□ 1.12
CTSB-217ENST00000530296 ABCA6Q8N139 1617 aa22.02■■□□□ 1.12
CTSB-217ENST00000530296 STRCQ7RTU9 1775 aa22.02■■□□□ 1.11
CTSB-217ENST00000530296 PTPRTO14522 1441 aa22.01■■□□□ 1.11
CTSB-217ENST00000530296 TRAPPC8Q9Y2L5 1435 aa22.01■■□□□ 1.11
CTSB-217ENST00000530296 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
CTSB-217ENST00000530296 C3P01024 1663 aa22■■□□□ 1.11
CTSB-217ENST00000530296 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
CTSB-217ENST00000530296 CCNB3Q8WWL7 1395 aa21.98■■□□□ 1.11
CTSB-217ENST00000530296 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
CTSB-217ENST00000530296 CDC42BPAQ5VT25 1732 aa21.96■■□□□ 1.11
CTSB-217ENST00000530296 KIDINS220Q9ULH0 1771 aa21.96■■□□□ 1.11
CTSB-217ENST00000530296 NPATQ14207 1427 aa21.93■■□□□ 1.1
CTSB-217ENST00000530296 MROH2AA6NES4 1674 aa21.92■■□□□ 1.1
CTSB-217ENST00000530296 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
CTSB-217ENST00000530296 PLEKHH2Q8IVE3 1493 aa21.92■■□□□ 1.1
CTSB-217ENST00000530296 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
CTSB-217ENST00000530296 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
CTSB-217ENST00000530296 IQSEC2Q5JU85 1478 aa21.91■■□□□ 1.1
CTSB-217ENST00000530296 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
CTSB-217ENST00000530296 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
CTSB-217ENST00000530296 CFDP1Q9UEE9 299 aaPredicted RBP21.9■■□□□ 1.1
CTSB-217ENST00000530296 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.1
CTSB-217ENST00000530296 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
CTSB-217ENST00000530296 ZNF777Q9ULD5 760 aaPredicted RBP21.87■■□□□ 1.09
CTSB-217ENST00000530296 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
CTSB-217ENST00000530296 ZMYM3Q14202 1370 aa21.86■■□□□ 1.09
CTSB-217ENST00000530296 SYCP2Q9BX26 1530 aa21.85■■□□□ 1.09
CTSB-217ENST00000530296 ATP7AQ04656 1500 aa21.83■■□□□ 1.09
CTSB-217ENST00000530296 HNRNPMP52272 730 aaKnown RBP eCLIP21.82■■□□□ 1.08
CTSB-217ENST00000530296 DISP3Q9P2K9 1392 aa21.82■■□□□ 1.08
CTSB-217ENST00000530296 LTBP4Q8N2S1 1624 aa21.81■■□□□ 1.08
CTSB-217ENST00000530296 A2MP01023 1474 aa21.8■■□□□ 1.08
CTSB-217ENST00000530296 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
CTSB-217ENST00000530296 PLXNC1O60486 1568 aa21.79■■□□□ 1.08
CTSB-217ENST00000530296 PKD2Q13563 968 aa21.79■■□□□ 1.08
CTSB-217ENST00000530296 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
CTSB-217ENST00000530296 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
CTSB-217ENST00000530296 MIA2Q96PC5 1412 aa21.78■■□□□ 1.08
CTSB-217ENST00000530296 PLA2R1Q13018 1463 aa21.77■■□□□ 1.08
CTSB-217ENST00000530296 ZNF142P52746 1687 aaPredicted RBP21.76■■□□□ 1.07
CTSB-217ENST00000530296 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
CTSB-217ENST00000530296 CLTCQ00610 1675 aaKnown RBP21.74■■□□□ 1.07
CTSB-217ENST00000530296 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
CTSB-217ENST00000530296 GGT6Q6P531 493 aa21.73■■□□□ 1.07
CTSB-217ENST00000530296 RTEL1-TNFRSF6BF6WH68 1400 aa21.72■■□□□ 1.07
CTSB-217ENST00000530296 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
CTSB-217ENST00000530296 MYO3AQ8NEV4 1616 aa21.71■■□□□ 1.07
CTSB-217ENST00000530296 SOCS7O14512 581 aa21.71■■□□□ 1.07
CTSB-217ENST00000530296 CAMSAP2Q08AD1 1489 aa21.71■■□□□ 1.07
CTSB-217ENST00000530296 CEP170BQ9Y4F5 1589 aaPredicted RBP21.7■■□□□ 1.06
CTSB-217ENST00000530296 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms