RNA–Protein interactions for RNA: ENST00000529800.5

CPNE7-205, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-205ENST00000529800 NEO1Q92859 1461 aa17.21■□□□□ 0.35
CPNE7-205ENST00000529800 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
CPNE7-205ENST00000529800 SETD1AO15047 1707 aaKnown RBP17.2■□□□□ 0.34
CPNE7-205ENST00000529800 SIGLEC1Q9BZZ2 1709 aa17.19■□□□□ 0.34
CPNE7-205ENST00000529800 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
CPNE7-205ENST00000529800 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
CPNE7-205ENST00000529800 POTEAQ6S8J7 498 aa17.17■□□□□ 0.34
CPNE7-205ENST00000529800 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
CPNE7-205ENST00000529800 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
CPNE7-205ENST00000529800 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
CPNE7-205ENST00000529800 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
CPNE7-205ENST00000529800 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
CPNE7-205ENST00000529800 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
CPNE7-205ENST00000529800 RICTORQ6R327 1708 aa17.11■□□□□ 0.33
CPNE7-205ENST00000529800 DENND4BO75064 1496 aaPredicted RBP17.11■□□□□ 0.33
CPNE7-205ENST00000529800 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
CPNE7-205ENST00000529800 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
CPNE7-205ENST00000529800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
CPNE7-205ENST00000529800 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
CPNE7-205ENST00000529800 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
CPNE7-205ENST00000529800 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
CPNE7-205ENST00000529800 NCKAP5LQ9HCH0 1330 aa17.07■□□□□ 0.32
CPNE7-205ENST00000529800 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
CPNE7-205ENST00000529800 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
CPNE7-205ENST00000529800 PLEKHD1A6NEE1 506 aa17.04■□□□□ 0.32
CPNE7-205ENST00000529800 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
CPNE7-205ENST00000529800 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
CPNE7-205ENST00000529800 ZMYM4Q5VZL5 1548 aa17.01■□□□□ 0.31
CPNE7-205ENST00000529800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.313e-8■■□□□ 11.5
CPNE7-205ENST00000529800 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
CPNE7-205ENST00000529800 C3P01024 1663 aa17■□□□□ 0.31
CPNE7-205ENST00000529800 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
CPNE7-205ENST00000529800 PKD2Q13563 968 aa16.98■□□□□ 0.31
CPNE7-205ENST00000529800 EEA1Q15075 1411 aa16.97■□□□□ 0.31
CPNE7-205ENST00000529800 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
CPNE7-205ENST00000529800 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
CPNE7-205ENST00000529800 CPS1P31327 1500 aa16.96■□□□□ 0.31
CPNE7-205ENST00000529800 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
CPNE7-205ENST00000529800 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
CPNE7-205ENST00000529800 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
CPNE7-205ENST00000529800 ATP10AO60312 1499 aa16.93■□□□□ 0.3
CPNE7-205ENST00000529800 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
CPNE7-205ENST00000529800 PLCH2O75038 1416 aa16.91■□□□□ 0.3
CPNE7-205ENST00000529800 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
CPNE7-205ENST00000529800 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
CPNE7-205ENST00000529800 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
CPNE7-205ENST00000529800 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
CPNE7-205ENST00000529800 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
CPNE7-205ENST00000529800 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
CPNE7-205ENST00000529800 FOXD1Q16676 465 aa16.83■□□□□ 0.28
CPNE7-205ENST00000529800 EFCAB2Q5VUJ9 269 aa16.83■□□□□ 0.28
CPNE7-205ENST00000529800 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
CPNE7-205ENST00000529800 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
CPNE7-205ENST00000529800 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
CPNE7-205ENST00000529800 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
CPNE7-205ENST00000529800 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
CPNE7-205ENST00000529800 ZNF518AQ6AHZ1 1483 aa16.79■□□□□ 0.28
CPNE7-205ENST00000529800 KDM5CP41229 1560 aa16.78■□□□□ 0.28
CPNE7-205ENST00000529800 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
CPNE7-205ENST00000529800 KIF14Q15058 1648 aa16.78■□□□□ 0.28
CPNE7-205ENST00000529800 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
CPNE7-205ENST00000529800 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
CPNE7-205ENST00000529800 ATP1B4Q9UN42 357 aaPredicted RBP16.75■□□□□ 0.27
CPNE7-205ENST00000529800 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
CPNE7-205ENST00000529800 NPATQ14207 1427 aa16.75■□□□□ 0.27
CPNE7-205ENST00000529800 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
CPNE7-205ENST00000529800 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
CPNE7-205ENST00000529800 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
CPNE7-205ENST00000529800 ARHGAP5Q13017 1502 aa16.73■□□□□ 0.27
CPNE7-205ENST00000529800 CNTLNQ9NXG0 1405 aa16.71■□□□□ 0.27
CPNE7-205ENST00000529800 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
CPNE7-205ENST00000529800 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
CPNE7-205ENST00000529800 MLH3Q9UHC1 1453 aa16.71■□□□□ 0.27
CPNE7-205ENST00000529800 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
CPNE7-205ENST00000529800 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
CPNE7-205ENST00000529800 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
CPNE7-205ENST00000529800 CLIP1P30622 1438 aa16.7■□□□□ 0.26
CPNE7-205ENST00000529800 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
CPNE7-205ENST00000529800 ABCA6Q8N139 1617 aa16.69■□□□□ 0.26
CPNE7-205ENST00000529800 AGLP35573 1532 aa16.69■□□□□ 0.26
CPNE7-205ENST00000529800 CEP170BQ9Y4F5 1589 aaPredicted RBP16.68■□□□□ 0.26
CPNE7-205ENST00000529800 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
CPNE7-205ENST00000529800 SETBP1Q9Y6X0 1596 aa16.68■□□□□ 0.26
CPNE7-205ENST00000529800 ZNF772Q68DY9 489 aaPredicted RBP16.67■□□□□ 0.26
CPNE7-205ENST00000529800 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
CPNE7-205ENST00000529800 ABCC1P33527 1531 aa16.65■□□□□ 0.26
CPNE7-205ENST00000529800 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
CPNE7-205ENST00000529800 PREX2Q70Z35 1606 aa16.65■□□□□ 0.26
CPNE7-205ENST00000529800 RXRBP28702 533 aa16.64■□□□□ 0.25
CPNE7-205ENST00000529800 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
CPNE7-205ENST00000529800 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
CPNE7-205ENST00000529800 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
CPNE7-205ENST00000529800 KIDINS220Q9ULH0 1771 aa16.62■□□□□ 0.25
CPNE7-205ENST00000529800 ZMYM3Q14202 1370 aa16.61■□□□□ 0.25
CPNE7-205ENST00000529800 CASKIN1Q8WXD9 1431 aa16.6■□□□□ 0.25
CPNE7-205ENST00000529800 CCDC18Q5T9S5 1454 aa16.6■□□□□ 0.25
CPNE7-205ENST00000529800 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
CPNE7-205ENST00000529800 NEURL4Q96JN8 1562 aa16.57■□□□□ 0.24
CPNE7-205ENST00000529800 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
CPNE7-205ENST00000529800 SAMD9LQ8IVG5 1584 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms