RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
PDZD3-211ENST00000529573 MLECQ14165 292 aa16.52■□□□□ 0.24
PDZD3-211ENST00000529573 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
PDZD3-211ENST00000529573 ATP10AO60312 1499 aa16.52■□□□□ 0.23
PDZD3-211ENST00000529573 FMN1Q68DA7 1419 aa16.52■□□□□ 0.23
PDZD3-211ENST00000529573 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
PDZD3-211ENST00000529573 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
PDZD3-211ENST00000529573 C9orf84Q5VXU9 1444 aa16.5■□□□□ 0.23
PDZD3-211ENST00000529573 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
PDZD3-211ENST00000529573 KIF14Q15058 1648 aa16.48■□□□□ 0.23
PDZD3-211ENST00000529573 CDK11AQ9UQ88 783 aaPredicted RBP16.47■□□□□ 0.23
PDZD3-211ENST00000529573 ZNF518AQ6AHZ1 1483 aa16.47■□□□□ 0.23
PDZD3-211ENST00000529573 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
PDZD3-211ENST00000529573 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
PDZD3-211ENST00000529573 ATP1B4Q9UN42 357 aaPredicted RBP16.46■□□□□ 0.23
PDZD3-211ENST00000529573 KDM5CP41229 1560 aa16.46■□□□□ 0.23
PDZD3-211ENST00000529573 UBTFP17480 764 aaKnown RBP16.45■□□□□ 0.22
PDZD3-211ENST00000529573 PREX1Q8TCU6 1659 aa16.45■□□□□ 0.22
PDZD3-211ENST00000529573 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
PDZD3-211ENST00000529573 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
PDZD3-211ENST00000529573 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
PDZD3-211ENST00000529573 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
PDZD3-211ENST00000529573 CLIP1P30622 1438 aa16.41■□□□□ 0.22
PDZD3-211ENST00000529573 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
PDZD3-211ENST00000529573 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
PDZD3-211ENST00000529573 DIP2CQ9Y2E4 1556 aa16.4■□□□□ 0.22
PDZD3-211ENST00000529573 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
PDZD3-211ENST00000529573 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
PDZD3-211ENST00000529573 CDC42BPBQ9Y5S2 1711 aa16.38■□□□□ 0.21
PDZD3-211ENST00000529573 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
PDZD3-211ENST00000529573 ABCA6Q8N139 1617 aa16.37■□□□□ 0.21
PDZD3-211ENST00000529573 UHRF1BP1Q6BDS2 1440 aa16.36■□□□□ 0.21
PDZD3-211ENST00000529573 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
PDZD3-211ENST00000529573 ABCC1P33527 1531 aa16.35■□□□□ 0.21
PDZD3-211ENST00000529573 AGLP35573 1532 aa16.35■□□□□ 0.21
PDZD3-211ENST00000529573 PREX2Q70Z35 1606 aa16.35■□□□□ 0.21
PDZD3-211ENST00000529573 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
PDZD3-211ENST00000529573 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
PDZD3-211ENST00000529573 C3P01024 1663 aa16.33■□□□□ 0.2
PDZD3-211ENST00000529573 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
PDZD3-211ENST00000529573 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
PDZD3-211ENST00000529573 ITSN2Q9NZM3 1697 aa16.31■□□□□ 0.2
PDZD3-211ENST00000529573 PTPRTO14522 1441 aa16.3■□□□□ 0.2
PDZD3-211ENST00000529573 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
PDZD3-211ENST00000529573 KIDINS220Q9ULH0 1771 aa16.3■□□□□ 0.2
PDZD3-211ENST00000529573 CDC42BPAQ5VT25 1732 aa16.28■□□□□ 0.2
PDZD3-211ENST00000529573 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
PDZD3-211ENST00000529573 ESF1Q9H501 851 aaKnown RBP16.26■□□□□ 0.19
PDZD3-211ENST00000529573 SAMD9LQ8IVG5 1584 aa16.25■□□□□ 0.19
PDZD3-211ENST00000529573 FYCO1Q9BQS8 1478 aa16.24■□□□□ 0.19
PDZD3-211ENST00000529573 NCOA1Q15788 1441 aa16.24■□□□□ 0.19
PDZD3-211ENST00000529573 LTBP4Q8N2S1 1624 aa16.23■□□□□ 0.19
PDZD3-211ENST00000529573 NPATQ14207 1427 aa16.22■□□□□ 0.19
PDZD3-211ENST00000529573 MROH2AA6NES4 1674 aa16.22■□□□□ 0.19
PDZD3-211ENST00000529573 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.19
PDZD3-211ENST00000529573 SYCP2Q9BX26 1530 aa16.2■□□□□ 0.18
PDZD3-211ENST00000529573 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
PDZD3-211ENST00000529573 IQSEC2Q5JU85 1478 aa16.2■□□□□ 0.18
PDZD3-211ENST00000529573 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
PDZD3-211ENST00000529573 ZMYM3Q14202 1370 aa16.19■□□□□ 0.18
PDZD3-211ENST00000529573 ILDR2Q71H61 639 aa16.19■□□□□ 0.18
PDZD3-211ENST00000529573 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
PDZD3-211ENST00000529573 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDZD3-211ENST00000529573 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
PDZD3-211ENST00000529573 CAMSAP1Q5T5Y3 1602 aa16.18■□□□□ 0.18
PDZD3-211ENST00000529573 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
PDZD3-211ENST00000529573 ATP7AQ04656 1500 aa16.17■□□□□ 0.18
PDZD3-211ENST00000529573 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
PDZD3-211ENST00000529573 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
PDZD3-211ENST00000529573 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
PDZD3-211ENST00000529573 A2MP01023 1474 aa16.15■□□□□ 0.18
PDZD3-211ENST00000529573 SOCS7O14512 581 aa16.13■□□□□ 0.17
PDZD3-211ENST00000529573 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
PDZD3-211ENST00000529573 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
PDZD3-211ENST00000529573 PTPRKQ15262 1439 aa16.12■□□□□ 0.17
PDZD3-211ENST00000529573 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
PDZD3-211ENST00000529573 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
PDZD3-211ENST00000529573 SPATA31D1Q6ZQQ2 1576 aa16.12■□□□□ 0.17
PDZD3-211ENST00000529573 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
PDZD3-211ENST00000529573 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
PDZD3-211ENST00000529573 PLA2R1Q13018 1463 aa16.11■□□□□ 0.17
PDZD3-211ENST00000529573 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
PDZD3-211ENST00000529573 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
PDZD3-211ENST00000529573 PKD2Q13563 968 aa16.09■□□□□ 0.17
PDZD3-211ENST00000529573 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
PDZD3-211ENST00000529573 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
PDZD3-211ENST00000529573 GGT6Q6P531 493 aa16.08■□□□□ 0.16
PDZD3-211ENST00000529573 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
PDZD3-211ENST00000529573 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.16
PDZD3-211ENST00000529573 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
PDZD3-211ENST00000529573 TIAM1Q13009 1591 aa16.06■□□□□ 0.16
PDZD3-211ENST00000529573 ZNF644Q9H582 1327 aaPredicted RBP16.06■□□□□ 0.16
PDZD3-211ENST00000529573 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
PDZD3-211ENST00000529573 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
PDZD3-211ENST00000529573 UBAP1LF5GYI3 381 aa16.02■□□□□ 0.16
PDZD3-211ENST00000529573 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.15
PDZD3-211ENST00000529573 DNMT1P26358 1616 aaKnown RBP16.01■□□□□ 0.15
PDZD3-211ENST00000529573 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
PDZD3-211ENST00000529573 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
PDZD3-211ENST00000529573 FAM135AQ9P2D6 1515 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms