RNA–Protein interactions for RNA: ENST00000529268.1

PDGFD-203, Transcript of platelet derived growth factor D, humanhuman

TSL 5

Gene PDGFD, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-203ENST00000529268 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
PDGFD-203ENST00000529268 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
PDGFD-203ENST00000529268 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
PDGFD-203ENST00000529268 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
PDGFD-203ENST00000529268 KIF14Q15058 1648 aa16.69■□□□□ 0.26
PDGFD-203ENST00000529268 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
PDGFD-203ENST00000529268 ZFYVE16Q7Z3T8 1539 aa16.69■□□□□ 0.26
PDGFD-203ENST00000529268 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
PDGFD-203ENST00000529268 ATP10AO60312 1499 aa16.67■□□□□ 0.26
PDGFD-203ENST00000529268 ARHGAP5Q13017 1502 aa16.67■□□□□ 0.26
PDGFD-203ENST00000529268 BCORL1Q5H9F3 1711 aa16.67■□□□□ 0.26
PDGFD-203ENST00000529268 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
PDGFD-203ENST00000529268 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
PDGFD-203ENST00000529268 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
PDGFD-203ENST00000529268 ZNF518AQ6AHZ1 1483 aa16.63■□□□□ 0.25
PDGFD-203ENST00000529268 CEBPAP49715 358 aaPredicted RBP16.63■□□□□ 0.25
PDGFD-203ENST00000529268 HSPA2P54652 639 aa16.63■□□□□ 0.25
PDGFD-203ENST00000529268 PCF11O94913 1555 aaKnown RBP16.63■□□□□ 0.25
PDGFD-203ENST00000529268 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
PDGFD-203ENST00000529268 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
PDGFD-203ENST00000529268 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
PDGFD-203ENST00000529268 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.25
PDGFD-203ENST00000529268 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
PDGFD-203ENST00000529268 LRRIQ1Q96JM4 1722 aa16.6■□□□□ 0.25
PDGFD-203ENST00000529268 CFDP1Q9UEE9 299 aaPredicted RBP16.6■□□□□ 0.25
PDGFD-203ENST00000529268 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
PDGFD-203ENST00000529268 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
PDGFD-203ENST00000529268 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
PDGFD-203ENST00000529268 GPATCH8Q9UKJ3 1502 aaKnown RBP16.57■□□□□ 0.24
PDGFD-203ENST00000529268 LMTK3Q96Q04 1460 aa16.57■□□□□ 0.24
PDGFD-203ENST00000529268 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
PDGFD-203ENST00000529268 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
PDGFD-203ENST00000529268 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
PDGFD-203ENST00000529268 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
PDGFD-203ENST00000529268 KDM5CP41229 1560 aa16.55■□□□□ 0.24
PDGFD-203ENST00000529268 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
PDGFD-203ENST00000529268 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
PDGFD-203ENST00000529268 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
PDGFD-203ENST00000529268 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
PDGFD-203ENST00000529268 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
PDGFD-203ENST00000529268 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
PDGFD-203ENST00000529268 ABCC1P33527 1531 aa16.51■□□□□ 0.23
PDGFD-203ENST00000529268 PREX2Q70Z35 1606 aa16.5■□□□□ 0.23
PDGFD-203ENST00000529268 FBXO41Q8TF61 875 aa16.49■□□□□ 0.23
PDGFD-203ENST00000529268 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
PDGFD-203ENST00000529268 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
PDGFD-203ENST00000529268 AGLP35573 1532 aa16.45■□□□□ 0.22
PDGFD-203ENST00000529268 SAMD9LQ8IVG5 1584 aa16.45■□□□□ 0.22
PDGFD-203ENST00000529268 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
PDGFD-203ENST00000529268 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
PDGFD-203ENST00000529268 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
PDGFD-203ENST00000529268 ABCA6Q8N139 1617 aa16.44■□□□□ 0.22
PDGFD-203ENST00000529268 SYCP2Q9BX26 1530 aa16.44■□□□□ 0.22
PDGFD-203ENST00000529268 GGT6Q6P531 493 aa16.43■□□□□ 0.22
PDGFD-203ENST00000529268 FER1L4A9Z1Z3 1794 aa16.43■□□□□ 0.22
PDGFD-203ENST00000529268 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
PDGFD-203ENST00000529268 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
PDGFD-203ENST00000529268 ZMYM3Q14202 1370 aa16.4■□□□□ 0.22
PDGFD-203ENST00000529268 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
PDGFD-203ENST00000529268 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
PDGFD-203ENST00000529268 UHRF1BP1Q6BDS2 1440 aa16.39■□□□□ 0.21
PDGFD-203ENST00000529268 CNTLNQ9NXG0 1405 aa16.39■□□□□ 0.21
PDGFD-203ENST00000529268 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
PDGFD-203ENST00000529268 A2MP01023 1474 aa16.38■□□□□ 0.21
PDGFD-203ENST00000529268 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
PDGFD-203ENST00000529268 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
PDGFD-203ENST00000529268 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
PDGFD-203ENST00000529268 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
PDGFD-203ENST00000529268 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
PDGFD-203ENST00000529268 ATP7AQ04656 1500 aa16.35■□□□□ 0.21
PDGFD-203ENST00000529268 TIAM1Q13009 1591 aa16.35■□□□□ 0.21
PDGFD-203ENST00000529268 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
PDGFD-203ENST00000529268 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
PDGFD-203ENST00000529268 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
PDGFD-203ENST00000529268 DHX29Q7Z478 1369 aaKnown RBP16.34■□□□□ 0.21
PDGFD-203ENST00000529268 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
PDGFD-203ENST00000529268 KIF3BO15066 747 aa16.33■□□□□ 0.2
PDGFD-203ENST00000529268 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.2
PDGFD-203ENST00000529268 PREX1Q8TCU6 1659 aa16.3■□□□□ 0.2
PDGFD-203ENST00000529268 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
PDGFD-203ENST00000529268 NPATQ14207 1427 aa16.29■□□□□ 0.2
PDGFD-203ENST00000529268 C3P01024 1663 aa16.29■□□□□ 0.2
PDGFD-203ENST00000529268 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
PDGFD-203ENST00000529268 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
PDGFD-203ENST00000529268 PLXNC1O60486 1568 aa16.27■□□□□ 0.2
PDGFD-203ENST00000529268 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
PDGFD-203ENST00000529268 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.19
PDGFD-203ENST00000529268 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.19
PDGFD-203ENST00000529268 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
PDGFD-203ENST00000529268 PTPRKQ15262 1439 aa16.27■□□□□ 0.19
PDGFD-203ENST00000529268 PTPRTO14522 1441 aa16.26■□□□□ 0.19
PDGFD-203ENST00000529268 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
PDGFD-203ENST00000529268 APLP2Q06481 763 aa16.25■□□□□ 0.19
PDGFD-203ENST00000529268 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
PDGFD-203ENST00000529268 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
PDGFD-203ENST00000529268 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
PDGFD-203ENST00000529268 PKD2Q13563 968 aa16.21■□□□□ 0.19
PDGFD-203ENST00000529268 MYOM3Q5VTT5 1437 aa16.19■□□□□ 0.18
PDGFD-203ENST00000529268 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
PDGFD-203ENST00000529268 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms