RNA–Protein interactions for RNA: ENST00000529008.5

SSR2-215, Transcript of signal sequence receptor subunit 2, human

TSL 5 BASIC

Gene SSR2, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR2-215	ENST00000529008	PLCH2	O75038	1416 aa		13.39	□□□□□ -0.27
SSR2-215	ENST00000529008	HECW1	Q76N89	1606 aa		13.39	□□□□□ -0.27
SSR2-215	ENST00000529008	MAGI2	Q86UL8	1455 aa		13.39	□□□□□ -0.27
SSR2-215	ENST00000529008	ARHGAP35	Q9NRY4	1499 aa		13.39	□□□□□ -0.27
SSR2-215	ENST00000529008	HSPA2	P54652	639 aa		13.38	□□□□□ -0.27
SSR2-215	ENST00000529008	SIGLEC1	Q9BZZ2	1709 aa		13.37	□□□□□ -0.27
SSR2-215	ENST00000529008	EFCAB2	Q5VUJ9	269 aa		13.35	□□□□□ -0.27
SSR2-215	ENST00000529008	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.35	□□□□□ -0.27
SSR2-215	ENST00000529008	TRO	Q12816	1431 aa	Predicted RBP	13.34	□□□□□ -0.27
SSR2-215	ENST00000529008	C9orf84	Q5VXU9	1444 aa		13.34	□□□□□ -0.27
SSR2-215	ENST00000529008	KIF14	Q15058	1648 aa		13.34	□□□□□ -0.27
SSR2-215	ENST00000529008	ARHGAP5	Q13017	1502 aa		13.34	□□□□□ -0.27
SSR2-215	ENST00000529008	CLIP1	P30622	1438 aa		13.33	□□□□□ -0.28
SSR2-215	ENST00000529008	ATP10A	O60312	1499 aa		13.32	□□□□□ -0.28
SSR2-215	ENST00000529008	ZNF518A	Q6AHZ1	1483 aa		13.32	□□□□□ -0.28
SSR2-215	ENST00000529008	ARHGEF12	Q9NZN5	1544 aa		13.31	□□□□□ -0.28
SSR2-215	ENST00000529008	CHIC1	Q5VXU3	224 aa		13.31	□□□□□ -0.28
SSR2-215	ENST00000529008	AFAP1	Q8N556	730 aa		13.3	□□□□□ -0.28
SSR2-215	ENST00000529008	MYT1L	Q9UL68	1186 aa		13.3	□□□□□ -0.28
SSR2-215	ENST00000529008	MYO5C	Q9NQX4	1742 aa		13.3	□□□□□ -0.28
SSR2-215	ENST00000529008	FER1L4	A9Z1Z3	1794 aa		13.29	□□□□□ -0.28
SSR2-215	ENST00000529008	KDM5C	P41229	1560 aa		13.28	□□□□□ -0.28
SSR2-215	ENST00000529008	CEBPA	P49715	358 aa	Predicted RBP	13.27	□□□□□ -0.29
SSR2-215	ENST00000529008	DIP2C	Q9Y2E4	1556 aa		13.25	□□□□□ -0.29
SSR2-215	ENST00000529008	CCDC18	Q5T9S5	1454 aa		13.24	□□□□□ -0.29
SSR2-215	ENST00000529008	CASKIN1	Q8WXD9	1431 aa		13.24	□□□□□ -0.29
SSR2-215	ENST00000529008	ABCC1	P33527	1531 aa		13.23	□□□□□ -0.29
SSR2-215	ENST00000529008	TRAPPC8	Q9Y2L5	1435 aa		13.23	□□□□□ -0.29
SSR2-215	ENST00000529008	UHRF1BP1	Q6BDS2	1440 aa		13.22	□□□□□ -0.29
SSR2-215	ENST00000529008	ABCA6	Q8N139	1617 aa		13.22	□□□□□ -0.29
SSR2-215	ENST00000529008	CERK	Q8TCT0	537 aa		13.22	□□□□□ -0.29
SSR2-215	ENST00000529008	MLH3	Q9UHC1	1453 aa		13.22	□□□□□ -0.29
SSR2-215	ENST00000529008	LRRIQ1	Q96JM4	1722 aa		13.22	□□□□□ -0.29
SSR2-215	ENST00000529008	PREX2	Q70Z35	1606 aa		13.21	□□□□□ -0.29
SSR2-215	ENST00000529008	RERE	Q9P2R6	1566 aa		13.2	□□□□□ -0.3
SSR2-215	ENST00000529008	FYCO1	Q9BQS8	1478 aa		13.2	□□□□□ -0.3
SSR2-215	ENST00000529008	PREX1	Q8TCU6	1659 aa		13.2	□□□□□ -0.3
SSR2-215	ENST00000529008	ESF1	Q9H501	851 aa	Known RBP	13.19	□□□□□ -0.3
SSR2-215	ENST00000529008	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.18	□□□□□ -0.3
SSR2-215	ENST00000529008	CDC42BPB	Q9Y5S2	1711 aa		13.18	□□□□□ -0.3
SSR2-215	ENST00000529008	AGL	P35573	1532 aa		13.18	□□□□□ -0.3
SSR2-215	ENST00000529008	ITSN2	Q9NZM3	1697 aa		13.16	□□□□□ -0.3
SSR2-215	ENST00000529008	SYCP2	Q9BX26	1530 aa		13.16	□□□□□ -0.3
SSR2-215	ENST00000529008	DMRT2	Q9Y5R5	561 aa		13.14	□□□□□ -0.31
SSR2-215	ENST00000529008	SAMD9L	Q8IVG5	1584 aa		13.14	□□□□□ -0.31
SSR2-215	ENST00000529008	CNTLN	Q9NXG0	1405 aa		13.13	□□□□□ -0.31
SSR2-215	ENST00000529008	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.13	□□□□□ -0.31
SSR2-215	ENST00000529008	SPAG9	O60271	1321 aa	Known RBP	13.13	□□□□□ -0.31
SSR2-215	ENST00000529008	KIDINS220	Q9ULH0	1771 aa		13.12	□□□□□ -0.31
SSR2-215	ENST00000529008	C3	P01024	1663 aa		13.12	□□□□□ -0.31
SSR2-215	ENST00000529008	CDC42BPA	Q5VT25	1732 aa		13.11	□□□□□ -0.31
SSR2-215	ENST00000529008	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
SSR2-215	ENST00000529008	CCNB3	Q8WWL7	1395 aa		13.1	□□□□□ -0.31
SSR2-215	ENST00000529008	STRC	Q7RTU9	1775 aa		13.1	□□□□□ -0.31
SSR2-215	ENST00000529008	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.1	□□□□□ -0.31
SSR2-215	ENST00000529008	MTUS2	Q5JR59	1369 aa		13.09	□□□□□ -0.31
SSR2-215	ENST00000529008	PTPRT	O14522	1441 aa		13.09	□□□□□ -0.31
SSR2-215	ENST00000529008	NCOA1	Q15788	1441 aa		13.09	□□□□□ -0.31
SSR2-215	ENST00000529008	ATP7A	Q04656	1500 aa		13.08	□□□□□ -0.31
SSR2-215	ENST00000529008	KIAA1107	Q9UPP5	1409 aa		13.08	□□□□□ -0.32
SSR2-215	ENST00000529008	PLEKHH2	Q8IVE3	1493 aa		13.08	□□□□□ -0.32
SSR2-215	ENST00000529008	NPAT	Q14207	1427 aa		13.07	□□□□□ -0.32
SSR2-215	ENST00000529008	A2M	P01023	1474 aa		13.07	□□□□□ -0.32
SSR2-215	ENST00000529008	PLXNC1	O60486	1568 aa		13.07	□□□□□ -0.32
SSR2-215	ENST00000529008	INO80	Q9ULG1	1556 aa	Predicted RBP	13.07	□□□□□ -0.32
SSR2-215	ENST00000529008	ZMYM3	Q14202	1370 aa		13.07	□□□□□ -0.32
SSR2-215	ENST00000529008	CAMSAP1	Q5T5Y3	1602 aa		13.05	□□□□□ -0.32
SSR2-215	ENST00000529008	GGT6	Q6P531	493 aa		13.04	□□□□□ -0.32
SSR2-215	ENST00000529008	ZNF644	Q9H582	1327 aa	Predicted RBP	13.04	□□□□□ -0.32
SSR2-215	ENST00000529008	DISP3	Q9P2K9	1392 aa		13.04	□□□□□ -0.32
SSR2-215	ENST00000529008	EHBP1L1	Q8N3D4	1523 aa		13.03	□□□□□ -0.32
SSR2-215	ENST00000529008	TIAM1	Q13009	1591 aa		13.03	□□□□□ -0.32
SSR2-215	ENST00000529008	LTBP4	Q8N2S1	1624 aa		13.02	□□□□□ -0.32
SSR2-215	ENST00000529008	MROH2A	A6NES4	1674 aa		13.02	□□□□□ -0.32
SSR2-215	ENST00000529008	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.02	□□□□□ -0.32
SSR2-215	ENST00000529008	NCKAP5L	Q9HCH0	1330 aa		13.02	□□□□□ -0.33
SSR2-215	ENST00000529008	PTPRK	Q15262	1439 aa		13.02	□□□□□ -0.33
SSR2-215	ENST00000529008	MYO3A	Q8NEV4	1616 aa		13.01	□□□□□ -0.33
SSR2-215	ENST00000529008	CLTC	Q00610	1675 aa	Known RBP	13	□□□□□ -0.33
SSR2-215	ENST00000529008	MBD5	Q9P267	1494 aa		13	□□□□□ -0.33
SSR2-215	ENST00000529008	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.99	□□□□□ -0.33
SSR2-215	ENST00000529008	CEP162	Q5TB80	1403 aa		12.99	□□□□□ -0.33
SSR2-215	ENST00000529008	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.99	□□□□□ -0.33
SSR2-215	ENST00000529008	SETD1B	Q9UPS6	1966 aa	Known RBP	12.99	□□□□□ -0.33
SSR2-215	ENST00000529008	PLA2R1	Q13018	1463 aa		12.98	□□□□□ -0.33
SSR2-215	ENST00000529008	IQSEC2	Q5JU85	1478 aa		12.98	□□□□□ -0.33
SSR2-215	ENST00000529008	ILDR2	Q71H61	639 aa		12.97	□□□□□ -0.33
SSR2-215	ENST00000529008	TCOF1	Q13428	1488 aa	Known RBP	12.97	□□□□□ -0.33
SSR2-215	ENST00000529008	ZNF142	P52746	1687 aa	Predicted RBP	12.96	□□□□□ -0.33
SSR2-215	ENST00000529008	SPATA31D1	Q6ZQQ2	1576 aa		12.96	□□□□□ -0.33
SSR2-215	ENST00000529008	CCDC141	Q6ZP82	1450 aa		12.96	□□□□□ -0.34
SSR2-215	ENST00000529008	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.96	□□□□□ -0.34
SSR2-215	ENST00000529008	PKD2	Q13563	968 aa		12.95	□□□□□ -0.34
SSR2-215	ENST00000529008	CAMSAP2	Q08AD1	1489 aa		12.95	□□□□□ -0.34
SSR2-215	ENST00000529008	NCOA2	Q15596	1464 aa		12.95	□□□□□ -0.34
SSR2-215	ENST00000529008	ADGB	Q8N7X0	1667 aa		12.95	□□□□□ -0.34
SSR2-215	ENST00000529008	DHX29	Q7Z478	1369 aa	Known RBP	12.94	□□□□□ -0.34
SSR2-215	ENST00000529008	KIF3B	O15066	747 aa		12.94	□□□□□ -0.34
SSR2-215	ENST00000529008	PPP6R1	Q9UPN7	881 aa		12.94	□□□□□ -0.34
SSR2-215	ENST00000529008	A2ML1	A8K2U0	1454 aa		12.93	□□□□□ -0.34

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