RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 SIN3AQ96ST3 1273 aa31.88■■■□□ 2.69
RDX-204ENST00000528498 DNMT1P26358 1616 aaKnown RBP31.87■■■□□ 2.69
RDX-204ENST00000528498 GCC2Q8IWJ2 1684 aa31.83■■■□□ 2.69
RDX-204ENST00000528498 NEUROD1Q13562 356 aa31.8■■■□□ 2.68
RDX-204ENST00000528498 ZNF316A6NFI3 1004 aaPredicted RBP31.79■■■□□ 2.68
RDX-204ENST00000528498 AKNAQ7Z591 1439 aa31.77■■■□□ 2.68
RDX-204ENST00000528498 ZCCHC11Q5TAX3 1644 aaKnown RBP31.72■■■□□ 2.67
RDX-204ENST00000528498 KCNH8Q96L42 1107 aa31.72■■■□□ 2.67
RDX-204ENST00000528498 OSCARQ8IYS5 282 aa31.71■■■□□ 2.67
RDX-204ENST00000528498 ROCK1Q13464 1354 aa31.71■■■□□ 2.67
RDX-204ENST00000528498 TTC37Q6PGP7 1564 aa31.7■■■□□ 2.67
RDX-204ENST00000528498 TRIM52Q96A61 297 aa31.7■■■□□ 2.66
RDX-204ENST00000528498 UHRF1BP1LA0JNW5 1464 aa31.68■■■□□ 2.66
RDX-204ENST00000528498 CDC42BPBQ9Y5S2 1711 aa31.68■■■□□ 2.66
RDX-204ENST00000528498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.67■■■□□ 2.66
RDX-204ENST00000528498 KDM5BQ9UGL1 1544 aa31.66■■■□□ 2.66
RDX-204ENST00000528498 DIEXFQ68CQ4 756 aaKnown RBP31.66■■■□□ 2.66
RDX-204ENST00000528498 DENND4BO75064 1496 aaPredicted RBP31.65■■■□□ 2.66
RDX-204ENST00000528498 CROCC2H7BZ55 1655 aa31.65■■■□□ 2.66
RDX-204ENST00000528498 HNRNPMP52272 730 aaKnown RBP eCLIP31.65■■■□□ 2.66
RDX-204ENST00000528498 PREX2Q70Z35 1606 aa31.63■■■□□ 2.65
RDX-204ENST00000528498 NCOA1Q15788 1441 aa31.62■■■□□ 2.65
RDX-204ENST00000528498 SAMD9LQ8IVG5 1584 aa31.6■■■□□ 2.65
RDX-204ENST00000528498 ADGBQ8N7X0 1667 aa31.58■■■□□ 2.65
RDX-204ENST00000528498 FOXD1Q16676 465 aa31.55■■■□□ 2.64
RDX-204ENST00000528498 MPHOSPH9Q99550 1183 aa31.55■■■□□ 2.64
RDX-204ENST00000528498 MBD5Q9P267 1494 aa31.55■■■□□ 2.64
RDX-204ENST00000528498 ARHGAP5Q13017 1502 aa31.54■■■□□ 2.64
RDX-204ENST00000528498 ADGRL2O95490 1459 aa31.54■■■□□ 2.64
RDX-204ENST00000528498 C9orf84Q5VXU9 1444 aa31.53■■■□□ 2.64
RDX-204ENST00000528498 MYO5CQ9NQX4 1742 aa31.5■■■□□ 2.63
RDX-204ENST00000528498 ANKRD30AQ9BXX3 1397 aa31.5■■■□□ 2.63
RDX-204ENST00000528498 SYCP2Q9BX26 1530 aa31.47■■■□□ 2.63
RDX-204ENST00000528498 TSPY4P0CV99 314 aa31.47■■■□□ 2.63
RDX-204ENST00000528498 TSPY10P0CW01 314 aa31.47■■■□□ 2.63
RDX-204ENST00000528498 ARHGEF5Q12774 1597 aa31.46■■■□□ 2.63
RDX-204ENST00000528498 SHANK2Q9UPX8 1470 aa31.46■■■□□ 2.63
RDX-204ENST00000528498 CCDC141Q6ZP82 1450 aa31.42■■■□□ 2.62
RDX-204ENST00000528498 ANKRD50Q9ULJ7 1429 aa31.42■■■□□ 2.62
RDX-204ENST00000528498 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
RDX-204ENST00000528498 PPP1R15AO75807 674 aaPredicted RBP31.41■■■□□ 2.62
RDX-204ENST00000528498 TIMELESSQ9UNS1 1208 aa31.41■■■□□ 2.62
RDX-204ENST00000528498 PLCH2O75038 1416 aa31.4■■■□□ 2.62
RDX-204ENST00000528498 SLC4A1APQ9BWU0 796 aaKnown RBP31.4■■■□□ 2.62
RDX-204ENST00000528498 WDR7Q9Y4E6 1490 aa31.39■■■□□ 2.62
RDX-204ENST00000528498 ARHGEF12Q9NZN5 1544 aa31.38■■■□□ 2.61
RDX-204ENST00000528498 PZPP20742 1482 aa31.37■■■□□ 2.61
RDX-204ENST00000528498 KIF15Q9NS87 1388 aa31.36■■■□□ 2.61
RDX-204ENST00000528498 ASXL2Q76L83 1435 aa31.32■■■□□ 2.6
RDX-204ENST00000528498 EFCAB2Q5VUJ9 269 aa31.31■■■□□ 2.6
RDX-204ENST00000528498 RSPH4AQ5TD94 716 aa31.3■■■□□ 2.6
RDX-204ENST00000528498 ANKRD30BQ9BXX2 1392 aa31.3■■■□□ 2.6
RDX-204ENST00000528498 KIAA1107Q9UPP5 1409 aa31.29■■■□□ 2.6
RDX-204ENST00000528498 PLEKHH2Q8IVE3 1493 aa31.25■■■□□ 2.59
RDX-204ENST00000528498 ABCC1P33527 1531 aa31.24■■■□□ 2.59
RDX-204ENST00000528498 ACIN1Q9UKV3 1341 aaKnown RBP31.24■■■□□ 2.59
RDX-204ENST00000528498 TRAPPC8Q9Y2L5 1435 aa31.24■■■□□ 2.59
RDX-204ENST00000528498 NUP155O75694 1391 aa31.24■■■□□ 2.59
RDX-204ENST00000528498 HIRIP3Q9BW71 556 aaPredicted RBP31.22■■■□□ 2.59
RDX-204ENST00000528498 PKD2Q13563 968 aa31.22■■■□□ 2.59
RDX-204ENST00000528498 MAST1Q9Y2H9 1570 aa31.21■■■□□ 2.59
RDX-204ENST00000528498 NPM1P06748 294 aaKnown RBP eCLIP31.2■■■□□ 2.59
RDX-204ENST00000528498 ABCA9Q8IUA7 1624 aa31.2■■■□□ 2.59
RDX-204ENST00000528498 MIER1Q8N108 512 aa31.19■■■□□ 2.58
RDX-204ENST00000528498 SCAF1Q9H7N4 1312 aaKnown RBP31.18■■■□□ 2.58
RDX-204ENST00000528498 AFAP1Q8N556 730 aa31.18■■■□□ 2.58
RDX-204ENST00000528498 L3MBTL2Q969R5 705 aa31.17■■■□□ 2.58
RDX-204ENST00000528498 RPRD2Q5VT52 1461 aaKnown RBP31.16■■■□□ 2.58
RDX-204ENST00000528498 FANCAO15360 1455 aa31.15■■■□□ 2.58
RDX-204ENST00000528498 ARAP3Q8WWN8 1544 aa31.14■■■□□ 2.58
RDX-204ENST00000528498 PLXNC1O60486 1568 aa31.11■■■□□ 2.57
RDX-204ENST00000528498 KDM5DQ9BY66 1539 aa31.09■■■□□ 2.57
RDX-204ENST00000528498 CYB5RLQ6IPT4 315 aa31.08■■■□□ 2.57
RDX-204ENST00000528498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.07■■■□□ 2.566e-8■■■□□ 16.9
RDX-204ENST00000528498 TEX14Q8IWB6 1497 aa31.06■■■□□ 2.56
RDX-204ENST00000528498 SPAG9O60271 1321 aaKnown RBP31.04■■■□□ 2.56
RDX-204ENST00000528498 FAM135AQ9P2D6 1515 aa31.03■■■□□ 2.56
RDX-204ENST00000528498 ADGRL1O94910 1474 aa31.03■■■□□ 2.56
RDX-204ENST00000528498 DUOX2Q9NRD8 1548 aa31.02■■■□□ 2.56
RDX-204ENST00000528498 SCAPERQ9BY12 1400 aa31.01■■■□□ 2.55
RDX-204ENST00000528498 ZFYVE16Q7Z3T8 1539 aa31■■■□□ 2.55
RDX-204ENST00000528498 NBPF8Q3BBV2 869 aa30.99■■■□□ 2.55
RDX-204ENST00000528498 UNC13BO14795 1591 aa30.98■■■□□ 2.55
RDX-204ENST00000528498 RIMBP3CA6NJZ7 1639 aa30.98■■■□□ 2.55
RDX-204ENST00000528498 RIMBP3BA6NNM3 1639 aa30.98■■■□□ 2.55
RDX-204ENST00000528498 RIMBP3Q9UFD9 1639 aa30.98■■■□□ 2.55
RDX-204ENST00000528498 CD109Q6YHK3 1445 aa30.96■■■□□ 2.55
RDX-204ENST00000528498 ERBINQ96RT1 1412 aa30.94■■■□□ 2.54
RDX-204ENST00000528498 RTEL1-TNFRSF6BF6WH68 1400 aa30.92■■■□□ 2.54
RDX-204ENST00000528498 CENPBP07199 599 aaPredicted RBP30.91■■■□□ 2.54
RDX-204ENST00000528498 DDX10Q13206 875 aaKnown RBP30.91■■■□□ 2.54
RDX-204ENST00000528498 MYT1LQ9UL68 1186 aa30.91■■■□□ 2.54
RDX-204ENST00000528498 ATP7AQ04656 1500 aa30.9■■■□□ 2.54
RDX-204ENST00000528498 INO80Q9ULG1 1556 aaPredicted RBP30.89■■■□□ 2.54
RDX-204ENST00000528498 IQGAP3Q86VI3 1631 aa30.87■■■□□ 2.53
RDX-204ENST00000528498 MAGI2Q86UL8 1455 aa30.86■■■□□ 2.53
RDX-204ENST00000528498 HSPA5P11021 654 aaKnown RBP30.85■■■□□ 2.53
RDX-204ENST00000528498 ZNF326Q5BKZ1 582 aaKnown RBP30.83■■■□□ 2.53
RDX-204ENST00000528498 PLA2R1Q13018 1463 aa30.82■■■□□ 2.53
RDX-204ENST00000528498 YTHDC1Q96MU7 727 aaKnown RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms