RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 SAMD9Q5K651 1589 aa13.8□□□□□ -0.2
AP003063.1-201ENST00000528496 EPRSP07814 1512 aaKnown RBP13.8□□□□□ -0.2
AP003063.1-201ENST00000528496 WDR7Q9Y4E6 1490 aa13.79□□□□□ -0.2
AP003063.1-201ENST00000528496 KDM6BO15054 1643 aa13.79□□□□□ -0.2
AP003063.1-201ENST00000528496 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
AP003063.1-201ENST00000528496 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
AP003063.1-201ENST00000528496 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.21
AP003063.1-201ENST00000528496 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
AP003063.1-201ENST00000528496 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
AP003063.1-201ENST00000528496 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
AP003063.1-201ENST00000528496 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
AP003063.1-201ENST00000528496 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
AP003063.1-201ENST00000528496 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
AP003063.1-201ENST00000528496 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
AP003063.1-201ENST00000528496 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
AP003063.1-201ENST00000528496 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
AP003063.1-201ENST00000528496 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
AP003063.1-201ENST00000528496 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
AP003063.1-201ENST00000528496 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
AP003063.1-201ENST00000528496 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
AP003063.1-201ENST00000528496 ATP10BO94823 1461 aa13.71□□□□□ -0.21
AP003063.1-201ENST00000528496 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
AP003063.1-201ENST00000528496 FKBP8Q14318 412 aa13.7□□□□□ -0.22
AP003063.1-201ENST00000528496 CFAP43Q8NDM7 1665 aa13.69□□□□□ -0.22
AP003063.1-201ENST00000528496 CD109Q6YHK3 1445 aa13.68□□□□□ -0.22
AP003063.1-201ENST00000528496 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
AP003063.1-201ENST00000528496 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
AP003063.1-201ENST00000528496 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
AP003063.1-201ENST00000528496 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
AP003063.1-201ENST00000528496 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
AP003063.1-201ENST00000528496 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
AP003063.1-201ENST00000528496 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
AP003063.1-201ENST00000528496 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
AP003063.1-201ENST00000528496 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
AP003063.1-201ENST00000528496 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
AP003063.1-201ENST00000528496 CCNB3Q8WWL7 1395 aa13.58□□□□□ -0.23
AP003063.1-201ENST00000528496 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.24
AP003063.1-201ENST00000528496 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
AP003063.1-201ENST00000528496 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
AP003063.1-201ENST00000528496 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
AP003063.1-201ENST00000528496 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
AP003063.1-201ENST00000528496 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
AP003063.1-201ENST00000528496 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
AP003063.1-201ENST00000528496 NEO1Q92859 1461 aa13.54□□□□□ -0.24
AP003063.1-201ENST00000528496 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
AP003063.1-201ENST00000528496 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
AP003063.1-201ENST00000528496 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
AP003063.1-201ENST00000528496 LRRC9Q6ZRR7 1453 aa13.53□□□□□ -0.24
AP003063.1-201ENST00000528496 FYCO1Q9BQS8 1478 aa13.51□□□□□ -0.25
AP003063.1-201ENST00000528496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP003063.1-201ENST00000528496 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
AP003063.1-201ENST00000528496 ADGRL1O94910 1474 aa13.49□□□□□ -0.25
AP003063.1-201ENST00000528496 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
AP003063.1-201ENST00000528496 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
AP003063.1-201ENST00000528496 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
AP003063.1-201ENST00000528496 FANCAO15360 1455 aa13.48□□□□□ -0.25
AP003063.1-201ENST00000528496 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
AP003063.1-201ENST00000528496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.46□□□□□ -0.25
AP003063.1-201ENST00000528496 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
AP003063.1-201ENST00000528496 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
AP003063.1-201ENST00000528496 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
AP003063.1-201ENST00000528496 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
AP003063.1-201ENST00000528496 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
AP003063.1-201ENST00000528496 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
AP003063.1-201ENST00000528496 MIER1Q8N108 512 aa13.45□□□□□ -0.26
AP003063.1-201ENST00000528496 KIF14Q15058 1648 aa13.45□□□□□ -0.26
AP003063.1-201ENST00000528496 TROQ12816 1431 aaPredicted RBP13.45□□□□□ -0.26
AP003063.1-201ENST00000528496 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
AP003063.1-201ENST00000528496 PLCH2O75038 1416 aa13.43□□□□□ -0.26
AP003063.1-201ENST00000528496 LRRIQ1Q96JM4 1722 aa13.43□□□□□ -0.26
AP003063.1-201ENST00000528496 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
AP003063.1-201ENST00000528496 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
AP003063.1-201ENST00000528496 FRMPD1Q5SYB0 1578 aa13.42□□□□□ -0.26
AP003063.1-201ENST00000528496 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
AP003063.1-201ENST00000528496 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
AP003063.1-201ENST00000528496 RICTORQ6R327 1708 aa13.4□□□□□ -0.26
AP003063.1-201ENST00000528496 ARHGAP5Q13017 1502 aa13.38□□□□□ -0.27
AP003063.1-201ENST00000528496 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
AP003063.1-201ENST00000528496 ZMYM4Q5VZL5 1548 aa13.37□□□□□ -0.27
AP003063.1-201ENST00000528496 ARHGEF40Q8TER5 1519 aa13.37□□□□□ -0.27
AP003063.1-201ENST00000528496 ARID4BQ4LE39 1312 aaPredicted RBP13.37□□□□□ -0.27
AP003063.1-201ENST00000528496 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
AP003063.1-201ENST00000528496 MAGI2Q86UL8 1455 aa13.35□□□□□ -0.27
AP003063.1-201ENST00000528496 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
AP003063.1-201ENST00000528496 SUPT6HQ7KZ85 1726 aaKnown RBP13.34□□□□□ -0.27
AP003063.1-201ENST00000528496 HAX1O00165 279 aa13.34□□□□□ -0.27
AP003063.1-201ENST00000528496 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
AP003063.1-201ENST00000528496 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
AP003063.1-201ENST00000528496 PREX2Q70Z35 1606 aa13.32□□□□□ -0.28
AP003063.1-201ENST00000528496 ZNF518AQ6AHZ1 1483 aa13.31□□□□□ -0.28
AP003063.1-201ENST00000528496 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
AP003063.1-201ENST00000528496 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
AP003063.1-201ENST00000528496 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
AP003063.1-201ENST00000528496 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
AP003063.1-201ENST00000528496 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
AP003063.1-201ENST00000528496 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
AP003063.1-201ENST00000528496 BCORL1Q5H9F3 1711 aa13.3□□□□□ -0.28
AP003063.1-201ENST00000528496 ADAMTSL3P82987 1691 aa13.3□□□□□ -0.28
AP003063.1-201ENST00000528496 FGD6Q6ZV73 1430 aa13.3□□□□□ -0.28
AP003063.1-201ENST00000528496 MYT1LQ9UL68 1186 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms