RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
MSRA-210ENST00000528246 EPRSP07814 1512 aaKnown RBP14.38□□□□□ -0.11
MSRA-210ENST00000528246 MAGI3Q5TCQ9 1506 aa14.38□□□□□ -0.11
MSRA-210ENST00000528246 ERICH6BQ5W0A0 696 aa14.37□□□□□ -0.11
MSRA-210ENST00000528246 PRG4Q92954 1404 aaPredicted RBP14.36□□□□□ -0.11
MSRA-210ENST00000528246 JPH4Q96JJ6 628 aa14.36□□□□□ -0.11
MSRA-210ENST00000528246 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
MSRA-210ENST00000528246 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
MSRA-210ENST00000528246 FKBP8Q14318 412 aa14.32□□□□□ -0.12
MSRA-210ENST00000528246 POLR1AO95602 1720 aaPredicted RBP14.3□□□□□ -0.12
MSRA-210ENST00000528246 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
MSRA-210ENST00000528246 DNMT1P26358 1616 aaKnown RBP14.3□□□□□ -0.12
MSRA-210ENST00000528246 RPRD2Q5VT52 1461 aaKnown RBP14.29□□□□□ -0.12
MSRA-210ENST00000528246 CNTLNQ9NXG0 1405 aa14.29□□□□□ -0.12
MSRA-210ENST00000528246 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
MSRA-210ENST00000528246 EIF4G2P78344 907 aaKnown RBP eCLIP14.28□□□□□ -0.12
MSRA-210ENST00000528246 NCOA1Q15788 1441 aa14.28□□□□□ -0.12
MSRA-210ENST00000528246 KIAA0586Q9BVV6 1533 aa14.27□□□□□ -0.13
MSRA-210ENST00000528246 DAPK1P53355 1430 aa14.26□□□□□ -0.13
MSRA-210ENST00000528246 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
MSRA-210ENST00000528246 MPHOSPH9Q99550 1183 aa14.25□□□□□ -0.13
MSRA-210ENST00000528246 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
MSRA-210ENST00000528246 KIAA0556O60303 1618 aa14.24□□□□□ -0.13
MSRA-210ENST00000528246 TEX14Q8IWB6 1497 aa14.24□□□□□ -0.13
MSRA-210ENST00000528246 KDM6BO15054 1643 aa14.23□□□□□ -0.13
MSRA-210ENST00000528246 HSPA5P11021 654 aaKnown RBP14.23□□□□□ -0.13
MSRA-210ENST00000528246 ABCC10Q5T3U5 1492 aa14.22□□□□□ -0.13
MSRA-210ENST00000528246 SPATA31E1Q6ZUB1 1445 aa14.22□□□□□ -0.13
MSRA-210ENST00000528246 TRIM52Q96A61 297 aa14.21□□□□□ -0.13
MSRA-210ENST00000528246 CDK13Q14004 1512 aaKnown RBP14.21□□□□□ -0.13
MSRA-210ENST00000528246 ITSN2Q9NZM3 1697 aa14.21□□□□□ -0.13
MSRA-210ENST00000528246 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
MSRA-210ENST00000528246 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.14
MSRA-210ENST00000528246 ABCC5O15440 1437 aa14.21□□□□□ -0.14
MSRA-210ENST00000528246 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
MSRA-210ENST00000528246 RAPGEF6Q8TEU7 1601 aa14.2□□□□□ -0.14
MSRA-210ENST00000528246 ADCY10Q96PN6 1610 aa14.2□□□□□ -0.14
MSRA-210ENST00000528246 DISP1Q96F81 1524 aa14.2□□□□□ -0.14
MSRA-210ENST00000528246 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
MSRA-210ENST00000528246 ARID4BQ4LE39 1312 aaPredicted RBP14.2□□□□□ -0.14
MSRA-210ENST00000528246 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
MSRA-210ENST00000528246 DIP2BQ9P265 1576 aa14.19□□□□□ -0.14
MSRA-210ENST00000528246 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
MSRA-210ENST00000528246 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
MSRA-210ENST00000528246 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
MSRA-210ENST00000528246 FAM69CQ0P6D2 419 aa14.18□□□□□ -0.14
MSRA-210ENST00000528246 RBM19Q9Y4C8 960 aaKnown RBP14.18□□□□□ -0.14
MSRA-210ENST00000528246 L3MBTL2Q969R5 705 aa14.17□□□□□ -0.14
MSRA-210ENST00000528246 MBD5Q9P267 1494 aa14.16□□□□□ -0.14
MSRA-210ENST00000528246 ZBED9Q6R2W3 1325 aa14.16□□□□□ -0.14
MSRA-210ENST00000528246 HNRNPUQ00839 825 aaKnown RBP eCLIP14.15□□□□□ -0.14
MSRA-210ENST00000528246 PRKRIP1Q9H875 184 aaPredicted RBP14.15□□□□□ -0.14
MSRA-210ENST00000528246 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.14
MSRA-210ENST00000528246 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
MSRA-210ENST00000528246 BCANQ96GW7 911 aa14.15□□□□□ -0.14
MSRA-210ENST00000528246 PTPRGP23470 1445 aa14.15□□□□□ -0.14
MSRA-210ENST00000528246 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
MSRA-210ENST00000528246 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
MSRA-210ENST00000528246 TSPOAP1O95153 1857 aa14.14□□□□□ -0.15
MSRA-210ENST00000528246 PZPP20742 1482 aa14.13□□□□□ -0.15
MSRA-210ENST00000528246 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
MSRA-210ENST00000528246 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
MSRA-210ENST00000528246 KIF14Q15058 1648 aa14.12□□□□□ -0.15
MSRA-210ENST00000528246 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
MSRA-210ENST00000528246 CAMSAP2Q08AD1 1489 aa14.11□□□□□ -0.15
MSRA-210ENST00000528246 UHRF1BP1Q6BDS2 1440 aa14.11□□□□□ -0.15
MSRA-210ENST00000528246 KIAA1107Q9UPP5 1409 aa14.11□□□□□ -0.15
MSRA-210ENST00000528246 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
MSRA-210ENST00000528246 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
MSRA-210ENST00000528246 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
MSRA-210ENST00000528246 GPATCH8Q9UKJ3 1502 aaKnown RBP14.08□□□□□ -0.16
MSRA-210ENST00000528246 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
MSRA-210ENST00000528246 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
MSRA-210ENST00000528246 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
MSRA-210ENST00000528246 NBPF8Q3BBV2 869 aa14.06□□□□□ -0.16
MSRA-210ENST00000528246 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
MSRA-210ENST00000528246 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
MSRA-210ENST00000528246 KDM5CP41229 1560 aa14.05□□□□□ -0.16
MSRA-210ENST00000528246 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
MSRA-210ENST00000528246 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
MSRA-210ENST00000528246 RALGAPBQ86X10 1494 aa14.04□□□□□ -0.16
MSRA-210ENST00000528246 DHX29Q7Z478 1369 aaKnown RBP14.03□□□□□ -0.16
MSRA-210ENST00000528246 MRS2Q9HD23 443 aa14.03□□□□□ -0.16
MSRA-210ENST00000528246 MYT1LQ9UL68 1186 aa14.03□□□□□ -0.16
MSRA-210ENST00000528246 ADGRL1O94910 1474 aa14.02□□□□□ -0.16
MSRA-210ENST00000528246 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.17
MSRA-210ENST00000528246 PPRC1Q5VV67 1664 aaKnown RBP14.01□□□□□ -0.17
MSRA-210ENST00000528246 RNF123Q5XPI4 1314 aa14.01□□□□□ -0.17
MSRA-210ENST00000528246 ARHGEF5Q12774 1597 aa14.01□□□□□ -0.17
MSRA-210ENST00000528246 ASXL2Q76L83 1435 aa14.01□□□□□ -0.17
MSRA-210ENST00000528246 CFDP1Q9UEE9 299 aaPredicted RBP14.01□□□□□ -0.17
MSRA-210ENST00000528246 UHRF1BP1LA0JNW5 1464 aa14□□□□□ -0.17
MSRA-210ENST00000528246 USP47Q96K76 1375 aa14□□□□□ -0.17
MSRA-210ENST00000528246 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
MSRA-210ENST00000528246 ABCA8O94911 1581 aa13.99□□□□□ -0.17
MSRA-210ENST00000528246 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
MSRA-210ENST00000528246 BCORL1Q5H9F3 1711 aa13.97□□□□□ -0.17
MSRA-210ENST00000528246 CDC42BPAQ5VT25 1732 aa13.97□□□□□ -0.17
MSRA-210ENST00000528246 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
MSRA-210ENST00000528246 FOXD1Q16676 465 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms