RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
ATM-212ENST00000527805 FYCO1Q9BQS8 1478 aa20.09■□□□□ 0.81
ATM-212ENST00000527805 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
ATM-212ENST00000527805 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
ATM-212ENST00000527805 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
ATM-212ENST00000527805 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
ATM-212ENST00000527805 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
ATM-212ENST00000527805 CANXP27824 592 aaKnown RBP20.05■□□□□ 0.8
ATM-212ENST00000527805 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
ATM-212ENST00000527805 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATM-212ENST00000527805 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
ATM-212ENST00000527805 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
ATM-212ENST00000527805 KNSTRNQ9Y448 316 aa20.01■□□□□ 0.79
ATM-212ENST00000527805 CUL7Q14999 1698 aa20■□□□□ 0.79
ATM-212ENST00000527805 IQGAP2Q13576 1575 aa20■□□□□ 0.79
ATM-212ENST00000527805 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
ATM-212ENST00000527805 AFAP1Q8N556 730 aa19.98■□□□□ 0.79
ATM-212ENST00000527805 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
ATM-212ENST00000527805 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
ATM-212ENST00000527805 STK26Q9P289 416 aa19.96■□□□□ 0.79
ATM-212ENST00000527805 TMF1P82094 1093 aa19.95■□□□□ 0.78
ATM-212ENST00000527805 HSPA5P11021 654 aaKnown RBP19.95■□□□□ 0.78
ATM-212ENST00000527805 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
ATM-212ENST00000527805 UACAQ9BZF9 1416 aa19.94■□□□□ 0.78
ATM-212ENST00000527805 KIF15Q9NS87 1388 aa19.94■□□□□ 0.78
ATM-212ENST00000527805 ZBTB7CA1YPR0 619 aa19.92■□□□□ 0.78
ATM-212ENST00000527805 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
ATM-212ENST00000527805 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
ATM-212ENST00000527805 ARHGAP5Q13017 1502 aa19.9■□□□□ 0.78
ATM-212ENST00000527805 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
ATM-212ENST00000527805 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
ATM-212ENST00000527805 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
ATM-212ENST00000527805 EPRSP07814 1512 aaKnown RBP19.87■□□□□ 0.77
ATM-212ENST00000527805 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
ATM-212ENST00000527805 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
ATM-212ENST00000527805 CCDC144AA2RUR9 1427 aa19.87■□□□□ 0.77
ATM-212ENST00000527805 CDK13Q14004 1512 aaKnown RBP19.87■□□□□ 0.77
ATM-212ENST00000527805 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
ATM-212ENST00000527805 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
ATM-212ENST00000527805 TIAM1Q13009 1591 aa19.85■□□□□ 0.77
ATM-212ENST00000527805 ANKRD50Q9ULJ7 1429 aa19.85■□□□□ 0.77
ATM-212ENST00000527805 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
ATM-212ENST00000527805 LMOD2Q6P5Q4 547 aa19.84■□□□□ 0.77
ATM-212ENST00000527805 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
ATM-212ENST00000527805 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.77
ATM-212ENST00000527805 TNNT2P45379 298 aaPredicted RBP19.83■□□□□ 0.76
ATM-212ENST00000527805 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.76
ATM-212ENST00000527805 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
ATM-212ENST00000527805 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
ATM-212ENST00000527805 MIA2Q96PC5 1412 aa19.8■□□□□ 0.76
ATM-212ENST00000527805 EID1Q9Y6B2 187 aa19.8■□□□□ 0.76
ATM-212ENST00000527805 HAP1P54257 671 aaPredicted RBP19.79■□□□□ 0.76
ATM-212ENST00000527805 PCF11O94913 1555 aaKnown RBP19.76■□□□□ 0.75
ATM-212ENST00000527805 RAPGEF3O95398 923 aa19.76■□□□□ 0.75
ATM-212ENST00000527805 FKBP8Q14318 412 aa19.76■□□□□ 0.75
ATM-212ENST00000527805 SCAPERQ9BY12 1400 aa19.74■□□□□ 0.75
ATM-212ENST00000527805 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
ATM-212ENST00000527805 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
ATM-212ENST00000527805 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
ATM-212ENST00000527805 PLEKHH2Q8IVE3 1493 aa19.71■□□□□ 0.75
ATM-212ENST00000527805 WDR62O43379 1518 aa19.7■□□□□ 0.74
ATM-212ENST00000527805 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
ATM-212ENST00000527805 NUDCQ9Y266 331 aa19.69■□□□□ 0.74
ATM-212ENST00000527805 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
ATM-212ENST00000527805 SOX12O15370 315 aa19.68■□□□□ 0.74
ATM-212ENST00000527805 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
ATM-212ENST00000527805 A0A0G2JS52 829 aa19.67■□□□□ 0.74
ATM-212ENST00000527805 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
ATM-212ENST00000527805 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
ATM-212ENST00000527805 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
ATM-212ENST00000527805 HDGFL2Q7Z4V5 671 aaPredicted RBP19.66■□□□□ 0.74
ATM-212ENST00000527805 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.65■□□□□ 0.74
ATM-212ENST00000527805 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.74
ATM-212ENST00000527805 DAPK1P53355 1430 aa19.64■□□□□ 0.73
ATM-212ENST00000527805 CD109Q6YHK3 1445 aa19.64■□□□□ 0.73
ATM-212ENST00000527805 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
ATM-212ENST00000527805 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
ATM-212ENST00000527805 MAPK8IP3Q9UPT6 1336 aa19.61■□□□□ 0.73
ATM-212ENST00000527805 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
ATM-212ENST00000527805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.73
ATM-212ENST00000527805 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
ATM-212ENST00000527805 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
ATM-212ENST00000527805 MYT1Q01538 1121 aa19.58■□□□□ 0.73
ATM-212ENST00000527805 KTN1Q86UP2 1357 aaKnown RBP19.58■□□□□ 0.72
ATM-212ENST00000527805 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
ATM-212ENST00000527805 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
ATM-212ENST00000527805 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
ATM-212ENST00000527805 USP47Q96K76 1375 aa19.55■□□□□ 0.72
ATM-212ENST00000527805 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
ATM-212ENST00000527805 ATP10BO94823 1461 aa19.53■□□□□ 0.72
ATM-212ENST00000527805 CCDC136Q96JN2 1154 aa19.53■□□□□ 0.72
ATM-212ENST00000527805 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
ATM-212ENST00000527805 KIF14Q15058 1648 aa19.52■□□□□ 0.72
ATM-212ENST00000527805 STAC3Q96MF2 364 aa19.52■□□□□ 0.72
ATM-212ENST00000527805 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
ATM-212ENST00000527805 NAIPQ13075 1403 aa19.52■□□□□ 0.71
ATM-212ENST00000527805 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
ATM-212ENST00000527805 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
ATM-212ENST00000527805 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
ATM-212ENST00000527805 ABCC5O15440 1437 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms