RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 TTC37Q6PGP7 1564 aa14.34□□□□□ -0.11
CCDC90B-208ENST00000527025 KIF14Q15058 1648 aa14.32□□□□□ -0.12
CCDC90B-208ENST00000527025 FYCO1Q9BQS8 1478 aa14.3□□□□□ -0.12
CCDC90B-208ENST00000527025 TROQ12816 1431 aaPredicted RBP14.28□□□□□ -0.12
CCDC90B-208ENST00000527025 ARAP3Q8WWN8 1544 aa14.28□□□□□ -0.12
CCDC90B-208ENST00000527025 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
CCDC90B-208ENST00000527025 RAPGEF3O95398 923 aa14.25□□□□□ -0.13
CCDC90B-208ENST00000527025 CDK11AQ9UQ88 783 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-208ENST00000527025 NEO1Q92859 1461 aa14.25□□□□□ -0.13
CCDC90B-208ENST00000527025 PLCH2O75038 1416 aa14.24□□□□□ -0.13
CCDC90B-208ENST00000527025 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-208ENST00000527025 FRMPD1Q5SYB0 1578 aa14.23□□□□□ -0.13
CCDC90B-208ENST00000527025 FANCAO15360 1455 aa14.23□□□□□ -0.13
CCDC90B-208ENST00000527025 AKNAQ7Z591 1439 aa14.23□□□□□ -0.13
CCDC90B-208ENST00000527025 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
CCDC90B-208ENST00000527025 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.13
CCDC90B-208ENST00000527025 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.13
CCDC90B-208ENST00000527025 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.14
CCDC90B-208ENST00000527025 RICTORQ6R327 1708 aa14.19□□□□□ -0.14
CCDC90B-208ENST00000527025 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
CCDC90B-208ENST00000527025 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
CCDC90B-208ENST00000527025 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
CCDC90B-208ENST00000527025 SCAPERQ9BY12 1400 aa14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 CFAP74Q9C0B2 1584 aa14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 DENND4BO75064 1496 aaPredicted RBP14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 ARHGEF12Q9NZN5 1544 aa14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
CCDC90B-208ENST00000527025 KCNA4P22459 653 aa14.14□□□□□ -0.15
CCDC90B-208ENST00000527025 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
CCDC90B-208ENST00000527025 SIGLEC1Q9BZZ2 1709 aa14.12□□□□□ -0.15
CCDC90B-208ENST00000527025 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
CCDC90B-208ENST00000527025 KANK4Q5T7N3 995 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-208ENST00000527025 POGZQ7Z3K3 1410 aa14.11□□□□□ -0.15
CCDC90B-208ENST00000527025 AFAP1Q8N556 730 aa14.11□□□□□ -0.15
CCDC90B-208ENST00000527025 YEATS2Q9ULM3 1422 aa14.1□□□□□ -0.15
CCDC90B-208ENST00000527025 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-208ENST00000527025 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
CCDC90B-208ENST00000527025 SAMD9LQ8IVG5 1584 aa14.09□□□□□ -0.15
CCDC90B-208ENST00000527025 EHBP1L1Q8N3D4 1523 aa14.09□□□□□ -0.15
CCDC90B-208ENST00000527025 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.15
CCDC90B-208ENST00000527025 ABCC1P33527 1531 aa14.08□□□□□ -0.16
CCDC90B-208ENST00000527025 ZNF644Q9H582 1327 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-208ENST00000527025 LRRC9Q6ZRR7 1453 aa14.07□□□□□ -0.16
CCDC90B-208ENST00000527025 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-208ENST00000527025 ITSN2Q9NZM3 1697 aa14.07□□□□□ -0.16
CCDC90B-208ENST00000527025 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
CCDC90B-208ENST00000527025 ARHGEF40Q8TER5 1519 aa14.06□□□□□ -0.16
CCDC90B-208ENST00000527025 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
CCDC90B-208ENST00000527025 KDM5CP41229 1560 aa14.05□□□□□ -0.16
CCDC90B-208ENST00000527025 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC90B-208ENST00000527025 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
CCDC90B-208ENST00000527025 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
CCDC90B-208ENST00000527025 CFDP1Q9UEE9 299 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-208ENST00000527025 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-208ENST00000527025 DSG3P32926 999 aa14.03□□□□□ -0.16
CCDC90B-208ENST00000527025 ZNF518AQ6AHZ1 1483 aa14.03□□□□□ -0.16
CCDC90B-208ENST00000527025 MAGI2Q86UL8 1455 aa14.03□□□□□ -0.16
CCDC90B-208ENST00000527025 SYCP2Q9BX26 1530 aa14.02□□□□□ -0.16
CCDC90B-208ENST00000527025 SLC4A2P04920 1241 aa14.02□□□□□ -0.17
CCDC90B-208ENST00000527025 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
CCDC90B-208ENST00000527025 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
CCDC90B-208ENST00000527025 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
CCDC90B-208ENST00000527025 ABCA6Q8N139 1617 aa14□□□□□ -0.17
CCDC90B-208ENST00000527025 ATP10AO60312 1499 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 KIAA1107Q9UPP5 1409 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 CAPN15O75808 1086 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 HECW2Q9P2P5 1572 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
CCDC90B-208ENST00000527025 ARID4BQ4LE39 1312 aaPredicted RBP13.98□□□□□ -0.17
CCDC90B-208ENST00000527025 MADDQ8WXG6 1647 aa13.96□□□□□ -0.17
CCDC90B-208ENST00000527025 C9orf84Q5VXU9 1444 aa13.95□□□□□ -0.18
CCDC90B-208ENST00000527025 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
CCDC90B-208ENST00000527025 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
CCDC90B-208ENST00000527025 MLECQ14165 292 aa13.94□□□□□ -0.18
CCDC90B-208ENST00000527025 SPAG9O60271 1321 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-208ENST00000527025 INO80Q9ULG1 1556 aaPredicted RBP13.93□□□□□ -0.18
CCDC90B-208ENST00000527025 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
CCDC90B-208ENST00000527025 PTPRMP28827 1452 aa13.92□□□□□ -0.18
CCDC90B-208ENST00000527025 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
CCDC90B-208ENST00000527025 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
CCDC90B-208ENST00000527025 ATP7AQ04656 1500 aa13.91□□□□□ -0.18
CCDC90B-208ENST00000527025 APLP2Q06481 763 aa13.91□□□□□ -0.18
CCDC90B-208ENST00000527025 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
CCDC90B-208ENST00000527025 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-208ENST00000527025 AGLP35573 1532 aa13.88□□□□□ -0.19
CCDC90B-208ENST00000527025 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
CCDC90B-208ENST00000527025 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
CCDC90B-208ENST00000527025 FER1L4A9Z1Z3 1794 aa13.87□□□□□ -0.19
CCDC90B-208ENST00000527025 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
CCDC90B-208ENST00000527025 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
CCDC90B-208ENST00000527025 ADGBQ8N7X0 1667 aa13.86□□□□□ -0.19
CCDC90B-208ENST00000527025 RTEL1-TNFRSF6BF6WH68 1400 aa13.85□□□□□ -0.19
CCDC90B-208ENST00000527025 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
CCDC90B-208ENST00000527025 A2MP01023 1474 aa13.85□□□□□ -0.19
CCDC90B-208ENST00000527025 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms