RNA–Protein interactions for RNA: ENST00000526688.1

FGFR1-228, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-228ENST00000526688 CDK13Q14004 1512 aaKnown RBP22.41■■□□□ 1.18
FGFR1-228ENST00000526688 ATP10AO60312 1499 aa22.41■■□□□ 1.18
FGFR1-228ENST00000526688 SCAPERQ9BY12 1400 aa22.41■■□□□ 1.18
FGFR1-228ENST00000526688 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
FGFR1-228ENST00000526688 C9orf84Q5VXU9 1444 aa22.39■■□□□ 1.17
FGFR1-228ENST00000526688 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
FGFR1-228ENST00000526688 KIF14Q15058 1648 aa22.37■■□□□ 1.17
FGFR1-228ENST00000526688 ZNF518AQ6AHZ1 1483 aa22.36■■□□□ 1.17
FGFR1-228ENST00000526688 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
FGFR1-228ENST00000526688 KDM5CP41229 1560 aa22.35■■□□□ 1.17
FGFR1-228ENST00000526688 REREQ9P2R6 1566 aa22.35■■□□□ 1.17
FGFR1-228ENST00000526688 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
FGFR1-228ENST00000526688 HSPA2P54652 639 aa22.33■■□□□ 1.17
FGFR1-228ENST00000526688 CERKQ8TCT0 537 aa22.31■■□□□ 1.16
FGFR1-228ENST00000526688 STRCQ7RTU9 1775 aa22.3■■□□□ 1.16
FGFR1-228ENST00000526688 LRRIQ1Q96JM4 1722 aa22.28■■□□□ 1.16
FGFR1-228ENST00000526688 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
FGFR1-228ENST00000526688 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
FGFR1-228ENST00000526688 CLIP1P30622 1438 aa22.28■■□□□ 1.16
FGFR1-228ENST00000526688 TROQ12816 1431 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-228ENST00000526688 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
FGFR1-228ENST00000526688 ARHGAP5Q13017 1502 aa22.26■■□□□ 1.15
FGFR1-228ENST00000526688 MLECQ14165 292 aa22.26■■□□□ 1.15
FGFR1-228ENST00000526688 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
FGFR1-228ENST00000526688 PREX2Q70Z35 1606 aa22.24■■□□□ 1.15
FGFR1-228ENST00000526688 C3P01024 1663 aa22.23■■□□□ 1.15
FGFR1-228ENST00000526688 MLH3Q9UHC1 1453 aa22.23■■□□□ 1.15
FGFR1-228ENST00000526688 AGLP35573 1532 aa22.23■■□□□ 1.15
FGFR1-228ENST00000526688 UHRF1BP1Q6BDS2 1440 aa22.22■■□□□ 1.15
FGFR1-228ENST00000526688 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
FGFR1-228ENST00000526688 ABCA6Q8N139 1617 aa22.2■■□□□ 1.15
FGFR1-228ENST00000526688 ITSN2Q9NZM3 1697 aa22.2■■□□□ 1.15
FGFR1-228ENST00000526688 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
FGFR1-228ENST00000526688 ABCC1P33527 1531 aa22.17■■□□□ 1.14
FGFR1-228ENST00000526688 CCDC18Q5T9S5 1454 aa22.16■■□□□ 1.14
FGFR1-228ENST00000526688 PTPRTO14522 1441 aa22.16■■□□□ 1.14
FGFR1-228ENST00000526688 ATP1B4Q9UN42 357 aaPredicted RBP22.16■■□□□ 1.14
FGFR1-228ENST00000526688 CDC42BPAQ5VT25 1732 aa22.16■■□□□ 1.14
FGFR1-228ENST00000526688 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
FGFR1-228ENST00000526688 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
FGFR1-228ENST00000526688 KIDINS220Q9ULH0 1771 aa22.15■■□□□ 1.14
FGFR1-228ENST00000526688 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.13
FGFR1-228ENST00000526688 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
FGFR1-228ENST00000526688 CEBPAP49715 358 aaPredicted RBP22.12■■□□□ 1.13
FGFR1-228ENST00000526688 TRAPPC8Q9Y2L5 1435 aa22.1■■□□□ 1.13
FGFR1-228ENST00000526688 CASKIN1Q8WXD9 1431 aa22.09■■□□□ 1.13
FGFR1-228ENST00000526688 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
FGFR1-228ENST00000526688 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
FGFR1-228ENST00000526688 NPATQ14207 1427 aa22.05■■□□□ 1.12
FGFR1-228ENST00000526688 LTBP4Q8N2S1 1624 aa22.03■■□□□ 1.12
FGFR1-228ENST00000526688 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
FGFR1-228ENST00000526688 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
FGFR1-228ENST00000526688 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
FGFR1-228ENST00000526688 ZNF142P52746 1687 aaPredicted RBP22.01■■□□□ 1.11
FGFR1-228ENST00000526688 SUPT6HQ7KZ85 1726 aaKnown RBP22■■□□□ 1.11
FGFR1-228ENST00000526688 DISP3Q9P2K9 1392 aa21.97■■□□□ 1.11
FGFR1-228ENST00000526688 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
FGFR1-228ENST00000526688 PLXNC1O60486 1568 aa21.95■■□□□ 1.11
FGFR1-228ENST00000526688 INO80Q9ULG1 1556 aaPredicted RBP21.95■■□□□ 1.11
FGFR1-228ENST00000526688 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
FGFR1-228ENST00000526688 KIAA1107Q9UPP5 1409 aa21.95■■□□□ 1.1
FGFR1-228ENST00000526688 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
FGFR1-228ENST00000526688 ADGBQ8N7X0 1667 aa21.95■■□□□ 1.1
FGFR1-228ENST00000526688 ATP7AQ04656 1500 aa21.94■■□□□ 1.1
FGFR1-228ENST00000526688 SYCP2Q9BX26 1530 aa21.94■■□□□ 1.1
FGFR1-228ENST00000526688 CLTCQ00610 1675 aaKnown RBP21.94■■□□□ 1.1
FGFR1-228ENST00000526688 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
FGFR1-228ENST00000526688 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
FGFR1-228ENST00000526688 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
FGFR1-228ENST00000526688 SOCS7O14512 581 aa21.91■■□□□ 1.1
FGFR1-228ENST00000526688 ZMYM3Q14202 1370 aa21.9■■□□□ 1.1
FGFR1-228ENST00000526688 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
FGFR1-228ENST00000526688 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
FGFR1-228ENST00000526688 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
FGFR1-228ENST00000526688 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
FGFR1-228ENST00000526688 CEP170BQ9Y4F5 1589 aaPredicted RBP21.87■■□□□ 1.09
FGFR1-228ENST00000526688 A2MP01023 1474 aa21.87■■□□□ 1.09
FGFR1-228ENST00000526688 PKD2Q13563 968 aa21.85■■□□□ 1.09
FGFR1-228ENST00000526688 ILDR2Q71H61 639 aa21.84■■□□□ 1.09
FGFR1-228ENST00000526688 TCOF1Q13428 1488 aaKnown RBP21.83■■□□□ 1.09
FGFR1-228ENST00000526688 PTPRKQ15262 1439 aa21.82■■□□□ 1.08
FGFR1-228ENST00000526688 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
FGFR1-228ENST00000526688 ZNF777Q9ULD5 760 aaPredicted RBP21.81■■□□□ 1.08
FGFR1-228ENST00000526688 POLR1AO95602 1720 aaPredicted RBP21.8■■□□□ 1.08
FGFR1-228ENST00000526688 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
FGFR1-228ENST00000526688 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.08
FGFR1-228ENST00000526688 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
FGFR1-228ENST00000526688 RTEL1-TNFRSF6BF6WH68 1400 aa21.78■■□□□ 1.08
FGFR1-228ENST00000526688 DNMT1P26358 1616 aaKnown RBP21.76■■□□□ 1.07
FGFR1-228ENST00000526688 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
FGFR1-228ENST00000526688 TIAM1Q13009 1591 aa21.75■■□□□ 1.07
FGFR1-228ENST00000526688 EHBP1L1Q8N3D4 1523 aa21.74■■□□□ 1.07
FGFR1-228ENST00000526688 NCKAP5LQ9HCH0 1330 aa21.74■■□□□ 1.07
FGFR1-228ENST00000526688 MTUS2Q5JR59 1369 aa21.74■■□□□ 1.07
FGFR1-228ENST00000526688 ZNF335Q9H4Z2 1342 aaPredicted RBP21.72■■□□□ 1.07
FGFR1-228ENST00000526688 MBD5Q9P267 1494 aa21.71■■□□□ 1.07
FGFR1-228ENST00000526688 CPS1P31327 1500 aa21.7■■□□□ 1.06
FGFR1-228ENST00000526688 GGT6Q6P531 493 aa21.69■■□□□ 1.06
FGFR1-228ENST00000526688 UBAP1LF5GYI3 381 aa21.68■■□□□ 1.06
FGFR1-228ENST00000526688 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms