RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
TRIM49D2-201ENST00000526396 MTUS2Q5JR59 1369 aa13.92□□□□□ -0.18
TRIM49D2-201ENST00000526396 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
TRIM49D2-201ENST00000526396 MAP3K1Q13233 1512 aa13.92□□□□□ -0.18
TRIM49D2-201ENST00000526396 ABCA9Q8IUA7 1624 aa13.92□□□□□ -0.18
TRIM49D2-201ENST00000526396 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
TRIM49D2-201ENST00000526396 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
TRIM49D2-201ENST00000526396 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
TRIM49D2-201ENST00000526396 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
TRIM49D2-201ENST00000526396 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.19
TRIM49D2-201ENST00000526396 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
TRIM49D2-201ENST00000526396 APLP2Q06481 763 aa13.86□□□□□ -0.19
TRIM49D2-201ENST00000526396 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
TRIM49D2-201ENST00000526396 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
TRIM49D2-201ENST00000526396 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
TRIM49D2-201ENST00000526396 CDC42BPAQ5VT25 1732 aa13.83□□□□□ -0.2
TRIM49D2-201ENST00000526396 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.2
TRIM49D2-201ENST00000526396 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
TRIM49D2-201ENST00000526396 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
TRIM49D2-201ENST00000526396 PLCH2O75038 1416 aa13.82□□□□□ -0.2
TRIM49D2-201ENST00000526396 CDC42BPBQ9Y5S2 1711 aa13.82□□□□□ -0.2
TRIM49D2-201ENST00000526396 PHLDB1Q86UU1 1377 aa13.81□□□□□ -0.2
TRIM49D2-201ENST00000526396 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
TRIM49D2-201ENST00000526396 FANCAO15360 1455 aa13.8□□□□□ -0.2
TRIM49D2-201ENST00000526396 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
TRIM49D2-201ENST00000526396 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
TRIM49D2-201ENST00000526396 COL17A1Q9UMD9 1497 aaPredicted RBP13.78□□□□□ -0.2
TRIM49D2-201ENST00000526396 ARAP3Q8WWN8 1544 aa13.77□□□□□ -0.2
TRIM49D2-201ENST00000526396 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
TRIM49D2-201ENST00000526396 ITSN2Q9NZM3 1697 aa13.76□□□□□ -0.21
TRIM49D2-201ENST00000526396 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
TRIM49D2-201ENST00000526396 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
TRIM49D2-201ENST00000526396 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
TRIM49D2-201ENST00000526396 NEO1Q92859 1461 aa13.74□□□□□ -0.21
TRIM49D2-201ENST00000526396 CFAP74Q9C0B2 1584 aa13.74□□□□□ -0.21
TRIM49D2-201ENST00000526396 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 ABCC1P33527 1531 aa13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
TRIM49D2-201ENST00000526396 KDM6BO15054 1643 aa13.72□□□□□ -0.21
TRIM49D2-201ENST00000526396 CAMSAP2Q08AD1 1489 aa13.71□□□□□ -0.21
TRIM49D2-201ENST00000526396 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.21
TRIM49D2-201ENST00000526396 FGD6Q6ZV73 1430 aa13.71□□□□□ -0.22
TRIM49D2-201ENST00000526396 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
TRIM49D2-201ENST00000526396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRIM49D2-201ENST00000526396 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
TRIM49D2-201ENST00000526396 TRAPPC8Q9Y2L5 1435 aa13.69□□□□□ -0.22
TRIM49D2-201ENST00000526396 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
TRIM49D2-201ENST00000526396 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
TRIM49D2-201ENST00000526396 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
TRIM49D2-201ENST00000526396 MIA2Q96PC5 1412 aa13.67□□□□□ -0.22
TRIM49D2-201ENST00000526396 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM49D2-201ENST00000526396 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
TRIM49D2-201ENST00000526396 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
TRIM49D2-201ENST00000526396 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
TRIM49D2-201ENST00000526396 TCOF1Q13428 1488 aaKnown RBP13.65□□□□□ -0.22
TRIM49D2-201ENST00000526396 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
TRIM49D2-201ENST00000526396 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
TRIM49D2-201ENST00000526396 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
TRIM49D2-201ENST00000526396 KDM5CP41229 1560 aa13.62□□□□□ -0.23
TRIM49D2-201ENST00000526396 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
TRIM49D2-201ENST00000526396 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
TRIM49D2-201ENST00000526396 ZMYM4Q5VZL5 1548 aa13.61□□□□□ -0.23
TRIM49D2-201ENST00000526396 RRBP1Q9P2E9 1410 aaKnown RBP13.61□□□□□ -0.23
TRIM49D2-201ENST00000526396 YEATS2Q9ULM3 1422 aa13.61□□□□□ -0.23
TRIM49D2-201ENST00000526396 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
TRIM49D2-201ENST00000526396 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
TRIM49D2-201ENST00000526396 ABCC5O15440 1437 aa13.59□□□□□ -0.23
TRIM49D2-201ENST00000526396 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
TRIM49D2-201ENST00000526396 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.23
TRIM49D2-201ENST00000526396 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.23
TRIM49D2-201ENST00000526396 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.24
TRIM49D2-201ENST00000526396 CROCC2H7BZ55 1655 aa13.58□□□□□ -0.24
TRIM49D2-201ENST00000526396 DAPK1P53355 1430 aa13.58□□□□□ -0.24
TRIM49D2-201ENST00000526396 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
TRIM49D2-201ENST00000526396 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
TRIM49D2-201ENST00000526396 ARHGEF40Q8TER5 1519 aa13.57□□□□□ -0.24
TRIM49D2-201ENST00000526396 PTPRKQ15262 1439 aa13.57□□□□□ -0.24
TRIM49D2-201ENST00000526396 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
TRIM49D2-201ENST00000526396 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
TRIM49D2-201ENST00000526396 MLH3Q9UHC1 1453 aa13.56□□□□□ -0.24
TRIM49D2-201ENST00000526396 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
TRIM49D2-201ENST00000526396 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
TRIM49D2-201ENST00000526396 DIP2CQ9Y2E4 1556 aa13.55□□□□□ -0.24
TRIM49D2-201ENST00000526396 ITGAEP38570 1179 aa13.55□□□□□ -0.24
TRIM49D2-201ENST00000526396 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
TRIM49D2-201ENST00000526396 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
TRIM49D2-201ENST00000526396 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
TRIM49D2-201ENST00000526396 SHANK2Q9UPX8 1470 aa13.53□□□□□ -0.24
TRIM49D2-201ENST00000526396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.24
TRIM49D2-201ENST00000526396 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.24
TRIM49D2-201ENST00000526396 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
TRIM49D2-201ENST00000526396 RTEL1-TNFRSF6BF6WH68 1400 aa13.5□□□□□ -0.25
TRIM49D2-201ENST00000526396 RSPH4AQ5TD94 716 aa13.49□□□□□ -0.25
TRIM49D2-201ENST00000526396 ATP10AO60312 1499 aa13.49□□□□□ -0.25
TRIM49D2-201ENST00000526396 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
TRIM49D2-201ENST00000526396 TSPY4P0CV99 314 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms