RNA–Protein interactions for RNA: ENST00000526279.5

PDZD3-204, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-204ENST00000526279 PREX1Q8TCU6 1659 aa23.35■■□□□ 1.33
PDZD3-204ENST00000526279 PLCH2O75038 1416 aa23.33■■□□□ 1.33
PDZD3-204ENST00000526279 SCAPERQ9BY12 1400 aa23.32■■□□□ 1.32
PDZD3-204ENST00000526279 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
PDZD3-204ENST00000526279 KIF14Q15058 1648 aa23.3■■□□□ 1.32
PDZD3-204ENST00000526279 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
PDZD3-204ENST00000526279 ATP10AO60312 1499 aa23.28■■□□□ 1.32
PDZD3-204ENST00000526279 KDM5CP41229 1560 aa23.27■■□□□ 1.32
PDZD3-204ENST00000526279 MLECQ14165 292 aa23.26■■□□□ 1.31
PDZD3-204ENST00000526279 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
PDZD3-204ENST00000526279 LRRIQ1Q96JM4 1722 aa23.23■■□□□ 1.31
PDZD3-204ENST00000526279 CERKQ8TCT0 537 aa23.23■■□□□ 1.31
PDZD3-204ENST00000526279 ZNF518AQ6AHZ1 1483 aa23.22■■□□□ 1.31
PDZD3-204ENST00000526279 DIP2CQ9Y2E4 1556 aa23.21■■□□□ 1.31
PDZD3-204ENST00000526279 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
PDZD3-204ENST00000526279 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
PDZD3-204ENST00000526279 ABCA6Q8N139 1617 aa23.19■■□□□ 1.3
PDZD3-204ENST00000526279 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
PDZD3-204ENST00000526279 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
PDZD3-204ENST00000526279 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
PDZD3-204ENST00000526279 EFCAB2Q5VUJ9 269 aa23.15■■□□□ 1.3
PDZD3-204ENST00000526279 C3P01024 1663 aa23.15■■□□□ 1.3
PDZD3-204ENST00000526279 TROQ12816 1431 aaPredicted RBP23.15■■□□□ 1.3
PDZD3-204ENST00000526279 PREX2Q70Z35 1606 aa23.12■■□□□ 1.29
PDZD3-204ENST00000526279 CEBPAP49715 358 aaPredicted RBP23.12■■□□□ 1.29
PDZD3-204ENST00000526279 SETD1BQ9UPS6 1966 aaKnown RBP23.12■■□□□ 1.29
PDZD3-204ENST00000526279 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
PDZD3-204ENST00000526279 ITSN2Q9NZM3 1697 aa23.1■■□□□ 1.29
PDZD3-204ENST00000526279 ABCC1P33527 1531 aa23.1■■□□□ 1.29
PDZD3-204ENST00000526279 MLH3Q9UHC1 1453 aa23.08■■□□□ 1.29
PDZD3-204ENST00000526279 AGLP35573 1532 aa23.08■■□□□ 1.28
PDZD3-204ENST00000526279 CLIP1P30622 1438 aa23.08■■□□□ 1.28
PDZD3-204ENST00000526279 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
PDZD3-204ENST00000526279 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
PDZD3-204ENST00000526279 CDK11AQ9UQ88 783 aaPredicted RBP23.05■■□□□ 1.28
PDZD3-204ENST00000526279 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
PDZD3-204ENST00000526279 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
PDZD3-204ENST00000526279 PTPRTO14522 1441 aa23.01■■□□□ 1.27
PDZD3-204ENST00000526279 TRAPPC8Q9Y2L5 1435 aa23.01■■□□□ 1.27
PDZD3-204ENST00000526279 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
PDZD3-204ENST00000526279 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
PDZD3-204ENST00000526279 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
PDZD3-204ENST00000526279 SPATA31D1Q6ZQQ2 1576 aa22.98■■□□□ 1.27
PDZD3-204ENST00000526279 MROH2AA6NES4 1674 aa22.97■■□□□ 1.27
PDZD3-204ENST00000526279 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
PDZD3-204ENST00000526279 CCDC18Q5T9S5 1454 aa22.97■■□□□ 1.27
PDZD3-204ENST00000526279 DISP3Q9P2K9 1392 aa22.96■■□□□ 1.27
PDZD3-204ENST00000526279 NCOA1Q15788 1441 aa22.95■■□□□ 1.26
PDZD3-204ENST00000526279 ILDR2Q71H61 639 aa22.95■■□□□ 1.26
PDZD3-204ENST00000526279 SAMD9LQ8IVG5 1584 aa22.93■■□□□ 1.26
PDZD3-204ENST00000526279 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
PDZD3-204ENST00000526279 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
PDZD3-204ENST00000526279 CNTLNQ9NXG0 1405 aa22.92■■□□□ 1.26
PDZD3-204ENST00000526279 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
PDZD3-204ENST00000526279 SYCP2Q9BX26 1530 aa22.89■■□□□ 1.26
PDZD3-204ENST00000526279 ZNF142P52746 1687 aaPredicted RBP22.89■■□□□ 1.25
PDZD3-204ENST00000526279 CAMSAP1Q5T5Y3 1602 aa22.89■■□□□ 1.25
PDZD3-204ENST00000526279 NPATQ14207 1427 aa22.88■■□□□ 1.25
PDZD3-204ENST00000526279 PLXNC1O60486 1568 aa22.88■■□□□ 1.25
PDZD3-204ENST00000526279 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
PDZD3-204ENST00000526279 INO80Q9ULG1 1556 aaPredicted RBP22.87■■□□□ 1.25
PDZD3-204ENST00000526279 SUPT6HQ7KZ85 1726 aaKnown RBP22.86■■□□□ 1.25
PDZD3-204ENST00000526279 FYCO1Q9BQS8 1478 aa22.85■■□□□ 1.25
PDZD3-204ENST00000526279 CLTCQ00610 1675 aaKnown RBP22.84■■□□□ 1.25
PDZD3-204ENST00000526279 SOCS7O14512 581 aa22.84■■□□□ 1.25
PDZD3-204ENST00000526279 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
PDZD3-204ENST00000526279 ATP7AQ04656 1500 aa22.82■■□□□ 1.24
PDZD3-204ENST00000526279 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
PDZD3-204ENST00000526279 CEP170BQ9Y4F5 1589 aaPredicted RBP22.79■■□□□ 1.24
PDZD3-204ENST00000526279 PLA2R1Q13018 1463 aa22.77■■□□□ 1.24
PDZD3-204ENST00000526279 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
PDZD3-204ENST00000526279 TCOF1Q13428 1488 aaKnown RBP22.75■■□□□ 1.23
PDZD3-204ENST00000526279 SPAG9O60271 1321 aaKnown RBP22.74■■□□□ 1.23
PDZD3-204ENST00000526279 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
PDZD3-204ENST00000526279 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
PDZD3-204ENST00000526279 KIAA1107Q9UPP5 1409 aa22.74■■□□□ 1.23
PDZD3-204ENST00000526279 A2MP01023 1474 aa22.73■■□□□ 1.23
PDZD3-204ENST00000526279 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
PDZD3-204ENST00000526279 PLEKHH2Q8IVE3 1493 aa22.72■■□□□ 1.23
PDZD3-204ENST00000526279 ZNF335Q9H4Z2 1342 aaPredicted RBP22.71■■□□□ 1.23
PDZD3-204ENST00000526279 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
PDZD3-204ENST00000526279 NCKAP5LQ9HCH0 1330 aa22.69■■□□□ 1.22
PDZD3-204ENST00000526279 HNRNPMP52272 730 aaKnown RBP eCLIP22.68■■□□□ 1.22
PDZD3-204ENST00000526279 TIAM1Q13009 1591 aa22.66■■□□□ 1.22
PDZD3-204ENST00000526279 POLR1AO95602 1720 aaPredicted RBP22.65■■□□□ 1.22
PDZD3-204ENST00000526279 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.22
PDZD3-204ENST00000526279 PKD2Q13563 968 aa22.63■■□□□ 1.21
PDZD3-204ENST00000526279 NEURL4Q96JN8 1562 aa22.62■■□□□ 1.21
PDZD3-204ENST00000526279 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
PDZD3-204ENST00000526279 A2ML1A8K2U0 1454 aa22.61■■□□□ 1.21
PDZD3-204ENST00000526279 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
PDZD3-204ENST00000526279 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
PDZD3-204ENST00000526279 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
PDZD3-204ENST00000526279 EHBP1L1Q8N3D4 1523 aa22.57■■□□□ 1.2
PDZD3-204ENST00000526279 GGT6Q6P531 493 aa22.57■■□□□ 1.2
PDZD3-204ENST00000526279 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
PDZD3-204ENST00000526279 FAM135AQ9P2D6 1515 aa22.55■■□□□ 1.2
PDZD3-204ENST00000526279 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
PDZD3-204ENST00000526279 RTEL1-TNFRSF6BF6WH68 1400 aa22.54■■□□□ 1.2
PDZD3-204ENST00000526279 KDM5DQ9BY66 1539 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms