RNA–Protein interactions for RNA: ENST00000526202.5

LMO7-218, Transcript of LIM domain 7, humanhuman

TSL 2 BASIC

Gene LMO7, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-218ENST00000526202 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
LMO7-218ENST00000526202 MRE11P49959 708 aa11.61□□□□□ -0.55
LMO7-218ENST00000526202 EXOC6Q8TAG9 804 aa11.61□□□□□ -0.55
LMO7-218ENST00000526202 MROH2BQ7Z745 1585 aa11.61□□□□□ -0.55
LMO7-218ENST00000526202 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
LMO7-218ENST00000526202 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
LMO7-218ENST00000526202 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
LMO7-218ENST00000526202 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.55
LMO7-218ENST00000526202 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
LMO7-218ENST00000526202 CGNQ9P2M7 1197 aaKnown RBP11.57□□□□□ -0.56
LMO7-218ENST00000526202 ZBED9Q6R2W3 1325 aa11.57□□□□□ -0.56
LMO7-218ENST00000526202 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
LMO7-218ENST00000526202 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
LMO7-218ENST00000526202 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
LMO7-218ENST00000526202 UQCRHLA0A096LP55 91 aa11.55□□□□□ -0.56
LMO7-218ENST00000526202 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
LMO7-218ENST00000526202 UQCRHP07919 91 aa11.55□□□□□ -0.56
LMO7-218ENST00000526202 KIAA2012Q0VF49 1180 aa11.54□□□□□ -0.56
LMO7-218ENST00000526202 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
LMO7-218ENST00000526202 GBP4Q96PP9 640 aa11.53□□□□□ -0.56
LMO7-218ENST00000526202 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
LMO7-218ENST00000526202 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
LMO7-218ENST00000526202 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
LMO7-218ENST00000526202 IRX3P78415 501 aaPredicted RBP11.52□□□□□ -0.57
LMO7-218ENST00000526202 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
LMO7-218ENST00000526202 CBX1P83916 185 aa11.52□□□□□ -0.57
LMO7-218ENST00000526202 IPO4Q8TEX9 1081 aaKnown RBP11.51□□□□□ -0.57
LMO7-218ENST00000526202 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
LMO7-218ENST00000526202 CLIP1P30622 1438 aa11.51□□□□□ -0.57
LMO7-218ENST00000526202 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
LMO7-218ENST00000526202 TAF3Q5VWG9 929 aa11.5□□□□□ -0.57
LMO7-218ENST00000526202 TRAK2O60296 914 aa11.5□□□□□ -0.57
LMO7-218ENST00000526202 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
LMO7-218ENST00000526202 SMAP1Q8IYB5 467 aaPredicted RBP11.5□□□□□ -0.57
LMO7-218ENST00000526202 PANK2Q9BZ23 570 aa11.5□□□□□ -0.57
LMO7-218ENST00000526202 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
LMO7-218ENST00000526202 WIZO95785 1651 aa11.49□□□□□ -0.57
LMO7-218ENST00000526202 RRP1P56182 461 aaKnown RBP11.49□□□□□ -0.57
LMO7-218ENST00000526202 XRCC6P12956 609 aaKnown RBP eCLIP11.48□□□□□ -0.57
LMO7-218ENST00000526202 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
LMO7-218ENST00000526202 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
LMO7-218ENST00000526202 BRD2P25440 801 aaKnown RBP11.47□□□□□ -0.57
LMO7-218ENST00000526202 FTSJ3Q8IY81 847 aaKnown RBP11.47□□□□□ -0.57
LMO7-218ENST00000526202 PLIN1O60240 522 aa11.46□□□□□ -0.57
LMO7-218ENST00000526202 NASPP49321 788 aaPredicted RBP11.46□□□□□ -0.58
LMO7-218ENST00000526202 AKNAQ7Z591 1439 aa11.46□□□□□ -0.58
LMO7-218ENST00000526202 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
LMO7-218ENST00000526202 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
LMO7-218ENST00000526202 KCNJ4P48050 445 aa11.45□□□□□ -0.58
LMO7-218ENST00000526202 WDR43Q15061 677 aaKnown RBP eCLIP11.45□□□□□ -0.58
LMO7-218ENST00000526202 ZSCAN30Q86W11 494 aa11.45□□□□□ -0.58
LMO7-218ENST00000526202 DDX49Q9Y6V7 483 aaKnown RBP11.44□□□□□ -0.58
LMO7-218ENST00000526202 CHMP5Q9NZZ3 219 aa11.43□□□□□ -0.58
LMO7-218ENST00000526202 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
LMO7-218ENST00000526202 CCDC173Q0VFZ6 552 aa11.42□□□□□ -0.58
LMO7-218ENST00000526202 CRBNQ96SW2 442 aa11.42□□□□□ -0.58
LMO7-218ENST00000526202 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
LMO7-218ENST00000526202 LETM1O95202 739 aaPredicted RBP11.41□□□□□ -0.58
LMO7-218ENST00000526202 SKAP1Q86WV1 359 aa11.41□□□□□ -0.58
LMO7-218ENST00000526202 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
LMO7-218ENST00000526202 SKOR2Q2VWA4 1001 aaPredicted RBP11.41□□□□□ -0.58
LMO7-218ENST00000526202 CENPQQ7L2Z9 268 aaPredicted RBP11.41□□□□□ -0.58
LMO7-218ENST00000526202 IGSF3O75054 1194 aa11.4□□□□□ -0.58
LMO7-218ENST00000526202 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
LMO7-218ENST00000526202 MCM4P33991 863 aa11.4□□□□□ -0.59
LMO7-218ENST00000526202 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
LMO7-218ENST00000526202 XPCQ01831 940 aaPredicted RBP11.39□□□□□ -0.59
LMO7-218ENST00000526202 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
LMO7-218ENST00000526202 MFAP1P55081 439 aaKnown RBP11.38□□□□□ -0.59
LMO7-218ENST00000526202 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
LMO7-218ENST00000526202 KIF20AO95235 890 aa11.38□□□□□ -0.59
LMO7-218ENST00000526202 ISY1Q9ULR0 285 aaKnown RBP11.38□□□□□ -0.59
LMO7-218ENST00000526202 GTPBP4Q9BZE4 634 aaKnown RBP11.37□□□□□ -0.59
LMO7-218ENST00000526202 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
LMO7-218ENST00000526202 ERICH4A6NGS2 130 aa11.37□□□□□ -0.59
LMO7-218ENST00000526202 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
LMO7-218ENST00000526202 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
LMO7-218ENST00000526202 DYNC1I1O14576 645 aa11.37□□□□□ -0.59
LMO7-218ENST00000526202 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
LMO7-218ENST00000526202 DNAJC2Q99543 621 aaKnown RBP11.36□□□□□ -0.59
LMO7-218ENST00000526202 HMGN5P82970 282 aaKnown RBP11.36□□□□□ -0.59
LMO7-218ENST00000526202 GTF2E1P29083 439 aaPredicted RBP11.35□□□□□ -0.59
LMO7-218ENST00000526202 CCDC88BA6NC98 1476 aa11.35□□□□□ -0.59
LMO7-218ENST00000526202 GOLGA3Q08378 1498 aa11.35□□□□□ -0.59
LMO7-218ENST00000526202 CCNB3Q8WWL7 1395 aa11.35□□□□□ -0.59
LMO7-218ENST00000526202 KTN1Q86UP2 1357 aaKnown RBP11.35□□□□□ -0.59
LMO7-218ENST00000526202 CC2D1BQ5T0F9 858 aaKnown RBP11.35□□□□□ -0.59
LMO7-218ENST00000526202 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
LMO7-218ENST00000526202 CCDC94Q9BW85 323 aaPredicted RBP11.35□□□□□ -0.59
LMO7-218ENST00000526202 PDCL2Q8N4E4 241 aa11.34□□□□□ -0.59
LMO7-218ENST00000526202 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
LMO7-218ENST00000526202 SASS6Q6UVJ0 657 aa11.34□□□□□ -0.59
LMO7-218ENST00000526202 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
LMO7-218ENST00000526202 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.59
LMO7-218ENST00000526202 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
LMO7-218ENST00000526202 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
LMO7-218ENST00000526202 OFD1O75665 1012 aa11.33□□□□□ -0.6
LMO7-218ENST00000526202 CCDC39Q9UFE4 941 aa11.32□□□□□ -0.6
LMO7-218ENST00000526202 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
LMO7-218ENST00000526202 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms