RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 YEATS2Q9ULM3 1422 aa27.7■■■□□ 2.03
CCS-204ENST00000526066 FMN1Q68DA7 1419 aa27.69■■■□□ 2.02
CCS-204ENST00000526066 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
CCS-204ENST00000526066 FER1L4A9Z1Z3 1794 aa27.68■■■□□ 2.02
CCS-204ENST00000526066 PLCH2O75038 1416 aa27.68■■■□□ 2.02
CCS-204ENST00000526066 CDK11AQ9UQ88 783 aaPredicted RBP27.68■■■□□ 2.02
CCS-204ENST00000526066 MYO5CQ9NQX4 1742 aa27.67■■■□□ 2.02
CCS-204ENST00000526066 MLECQ14165 292 aa27.67■■■□□ 2.02
CCS-204ENST00000526066 HSPA2P54652 639 aa27.63■■■□□ 2.01
CCS-204ENST00000526066 EFCAB2Q5VUJ9 269 aa27.63■■■□□ 2.01
CCS-204ENST00000526066 SIGLEC1Q9BZZ2 1709 aa27.61■■■□□ 2.01
CCS-204ENST00000526066 KIF14Q15058 1648 aa27.6■■■□□ 2.01
CCS-204ENST00000526066 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
CCS-204ENST00000526066 ATP10AO60312 1499 aa27.59■■■□□ 2.01
CCS-204ENST00000526066 CLIP1P30622 1438 aa27.58■■■□□ 2.01
CCS-204ENST00000526066 C9orf84Q5VXU9 1444 aa27.58■■■□□ 2.01
CCS-204ENST00000526066 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
CCS-204ENST00000526066 ZNF518AQ6AHZ1 1483 aa27.55■■■□□ 2
CCS-204ENST00000526066 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
CCS-204ENST00000526066 ARHGAP5Q13017 1502 aa27.55■■■□□ 2
CCS-204ENST00000526066 ARHGEF12Q9NZN5 1544 aa27.52■■■□□ 2
CCS-204ENST00000526066 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
CCS-204ENST00000526066 PREX1Q8TCU6 1659 aa27.51■■□□□ 1.99
CCS-204ENST00000526066 CERKQ8TCT0 537 aa27.45■■□□□ 1.98
CCS-204ENST00000526066 KDM5CP41229 1560 aa27.44■■□□□ 1.98
CCS-204ENST00000526066 AFAP1Q8N556 730 aa27.41■■□□□ 1.98
CCS-204ENST00000526066 CEBPAP49715 358 aaPredicted RBP27.39■■□□□ 1.98
CCS-204ENST00000526066 ESF1Q9H501 851 aaKnown RBP27.39■■□□□ 1.98
CCS-204ENST00000526066 DMRT2Q9Y5R5 561 aa27.39■■□□□ 1.98
CCS-204ENST00000526066 UHRF1BP1Q6BDS2 1440 aa27.39■■□□□ 1.97
CCS-204ENST00000526066 LRRIQ1Q96JM4 1722 aa27.38■■□□□ 1.97
CCS-204ENST00000526066 DIP2CQ9Y2E4 1556 aa27.38■■□□□ 1.97
CCS-204ENST00000526066 CCDC18Q5T9S5 1454 aa27.38■■□□□ 1.97
CCS-204ENST00000526066 CDC42BPBQ9Y5S2 1711 aa27.37■■□□□ 1.97
CCS-204ENST00000526066 REREQ9P2R6 1566 aa27.36■■□□□ 1.97
CCS-204ENST00000526066 PREX2Q70Z35 1606 aa27.36■■□□□ 1.97
CCS-204ENST00000526066 SETD1BQ9UPS6 1966 aaKnown RBP27.34■■□□□ 1.97
CCS-204ENST00000526066 MLH3Q9UHC1 1453 aa27.33■■□□□ 1.97
CCS-204ENST00000526066 ABCA6Q8N139 1617 aa27.33■■□□□ 1.97
CCS-204ENST00000526066 ABCC1P33527 1531 aa27.31■■□□□ 1.96
CCS-204ENST00000526066 ITSN2Q9NZM3 1697 aa27.3■■□□□ 1.96
CCS-204ENST00000526066 CASKIN1Q8WXD9 1431 aa27.3■■□□□ 1.96
CCS-204ENST00000526066 C3P01024 1663 aa27.27■■□□□ 1.96
CCS-204ENST00000526066 AGLP35573 1532 aa27.27■■□□□ 1.96
CCS-204ENST00000526066 STRCQ7RTU9 1775 aa27.26■■□□□ 1.95
CCS-204ENST00000526066 TRAPPC8Q9Y2L5 1435 aa27.25■■□□□ 1.95
CCS-204ENST00000526066 VPS8Q8N3P4 1428 aa27.24■■□□□ 1.95
CCS-204ENST00000526066 CDC42BPAQ5VT25 1732 aa27.23■■□□□ 1.95
CCS-204ENST00000526066 CNTLNQ9NXG0 1405 aa27.23■■□□□ 1.95
CCS-204ENST00000526066 FYCO1Q9BQS8 1478 aa27.21■■□□□ 1.95
CCS-204ENST00000526066 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.95
CCS-204ENST00000526066 ZNF777Q9ULD5 760 aaPredicted RBP27.19■■□□□ 1.94
CCS-204ENST00000526066 DISP3Q9P2K9 1392 aa27.18■■□□□ 1.94
CCS-204ENST00000526066 PTPRTO14522 1441 aa27.16■■□□□ 1.94
CCS-204ENST00000526066 SAMD9LQ8IVG5 1584 aa27.14■■□□□ 1.93
CCS-204ENST00000526066 SPAG9O60271 1321 aaKnown RBP27.13■■□□□ 1.93
CCS-204ENST00000526066 SYCP2Q9BX26 1530 aa27.12■■□□□ 1.93
CCS-204ENST00000526066 MROH2AA6NES4 1674 aa27.11■■□□□ 1.93
CCS-204ENST00000526066 SOCS7O14512 581 aa27.11■■□□□ 1.93
CCS-204ENST00000526066 PLEKHH2Q8IVE3 1493 aa27.08■■□□□ 1.93
CCS-204ENST00000526066 SUPT6HQ7KZ85 1726 aaKnown RBP27.08■■□□□ 1.93
CCS-204ENST00000526066 ILDR2Q71H61 639 aa27.08■■□□□ 1.93
CCS-204ENST00000526066 NPATQ14207 1427 aa27.07■■□□□ 1.92
CCS-204ENST00000526066 GPATCH8Q9UKJ3 1502 aaKnown RBP27.07■■□□□ 1.92
CCS-204ENST00000526066 NCOA1Q15788 1441 aa27.06■■□□□ 1.92
CCS-204ENST00000526066 ATP7AQ04656 1500 aa27.06■■□□□ 1.92
CCS-204ENST00000526066 CFDP1Q9UEE9 299 aaPredicted RBP27.05■■□□□ 1.92
CCS-204ENST00000526066 HNRNPMP52272 730 aaKnown RBP eCLIP27.04■■□□□ 1.92
CCS-204ENST00000526066 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
CCS-204ENST00000526066 ZMYM3Q14202 1370 aa27.02■■□□□ 1.92
CCS-204ENST00000526066 CAMSAP1Q5T5Y3 1602 aa27.01■■□□□ 1.92
CCS-204ENST00000526066 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
CCS-204ENST00000526066 CLTCQ00610 1675 aaKnown RBP27.01■■□□□ 1.91
CCS-204ENST00000526066 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
CCS-204ENST00000526066 INO80Q9ULG1 1556 aaPredicted RBP27■■□□□ 1.91
CCS-204ENST00000526066 A2MP01023 1474 aa27■■□□□ 1.91
CCS-204ENST00000526066 IQSEC2Q5JU85 1478 aa27■■□□□ 1.91
CCS-204ENST00000526066 LTBP4Q8N2S1 1624 aa26.98■■□□□ 1.91
CCS-204ENST00000526066 MAP3K1Q13233 1512 aa26.97■■□□□ 1.91
CCS-204ENST00000526066 PLXNC1O60486 1568 aa26.97■■□□□ 1.91
CCS-204ENST00000526066 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.9
CCS-204ENST00000526066 MYO3AQ8NEV4 1616 aa26.94■■□□□ 1.9
CCS-204ENST00000526066 GGT6Q6P531 493 aa26.94■■□□□ 1.9
CCS-204ENST00000526066 ZNF142P52746 1687 aaPredicted RBP26.93■■□□□ 1.9
CCS-204ENST00000526066 SPATA31D1Q6ZQQ2 1576 aa26.92■■□□□ 1.9
CCS-204ENST00000526066 APLP2Q06481 763 aa26.91■■□□□ 1.9
CCS-204ENST00000526066 TIAM1Q13009 1591 aa26.9■■□□□ 1.9
CCS-204ENST00000526066 CEP170BQ9Y4F5 1589 aaPredicted RBP26.9■■□□□ 1.9
CCS-204ENST00000526066 NCKAP5LQ9HCH0 1330 aa26.9■■□□□ 1.9
CCS-204ENST00000526066 PPP6R1Q9UPN7 881 aa26.89■■□□□ 1.9
CCS-204ENST00000526066 PLA2R1Q13018 1463 aa26.88■■□□□ 1.89
CCS-204ENST00000526066 PKD2Q13563 968 aa26.88■■□□□ 1.89
CCS-204ENST00000526066 EHBP1L1Q8N3D4 1523 aa26.88■■□□□ 1.89
CCS-204ENST00000526066 PTPRKQ15262 1439 aa26.87■■□□□ 1.89
CCS-204ENST00000526066 ZNF335Q9H4Z2 1342 aaPredicted RBP26.83■■□□□ 1.89
CCS-204ENST00000526066 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
CCS-204ENST00000526066 RTEL1-TNFRSF6BF6WH68 1400 aa26.8■■□□□ 1.88
CCS-204ENST00000526066 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
CCS-204ENST00000526066 ZNF644Q9H582 1327 aaPredicted RBP26.79■■□□□ 1.88
CCS-204ENST00000526066 LRRC9Q6ZRR7 1453 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms