RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 CFAP74Q9C0B2 1584 aa23.95■■□□□ 1.43
ROM1-202ENST00000525801 ZFYVE16Q7Z3T8 1539 aa23.95■■□□□ 1.43
ROM1-202ENST00000525801 POGZQ7Z3K3 1410 aa23.95■■□□□ 1.42
ROM1-202ENST00000525801 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
ROM1-202ENST00000525801 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
ROM1-202ENST00000525801 CEBPAP49715 358 aaPredicted RBP23.89■■□□□ 1.41
ROM1-202ENST00000525801 FBXO41Q8TF61 875 aa23.89■■□□□ 1.41
ROM1-202ENST00000525801 PCF11O94913 1555 aaKnown RBP23.88■■□□□ 1.41
ROM1-202ENST00000525801 LMTK3Q96Q04 1460 aa23.87■■□□□ 1.41
ROM1-202ENST00000525801 KIF14Q15058 1648 aa23.86■■□□□ 1.41
ROM1-202ENST00000525801 ARHGAP5Q13017 1502 aa23.85■■□□□ 1.41
ROM1-202ENST00000525801 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
ROM1-202ENST00000525801 CLIP1P30622 1438 aa23.84■■□□□ 1.41
ROM1-202ENST00000525801 TROQ12816 1431 aaPredicted RBP23.84■■□□□ 1.41
ROM1-202ENST00000525801 ZMYM4Q5VZL5 1548 aa23.84■■□□□ 1.41
ROM1-202ENST00000525801 MAGI2Q86UL8 1455 aa23.83■■□□□ 1.41
ROM1-202ENST00000525801 ATP10AO60312 1499 aa23.82■■□□□ 1.4
ROM1-202ENST00000525801 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
ROM1-202ENST00000525801 MYO5CQ9NQX4 1742 aa23.79■■□□□ 1.4
ROM1-202ENST00000525801 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
ROM1-202ENST00000525801 ESF1Q9H501 851 aaKnown RBP23.74■■□□□ 1.39
ROM1-202ENST00000525801 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
ROM1-202ENST00000525801 FER1L4A9Z1Z3 1794 aa23.73■■□□□ 1.39
ROM1-202ENST00000525801 LRRIQ1Q96JM4 1722 aa23.7■■□□□ 1.39
ROM1-202ENST00000525801 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
ROM1-202ENST00000525801 TRAPPC8Q9Y2L5 1435 aa23.69■■□□□ 1.38
ROM1-202ENST00000525801 ARHGEF12Q9NZN5 1544 aa23.67■■□□□ 1.38
ROM1-202ENST00000525801 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
ROM1-202ENST00000525801 CERKQ8TCT0 537 aa23.65■■□□□ 1.38
ROM1-202ENST00000525801 CCDC18Q5T9S5 1454 aa23.64■■□□□ 1.38
ROM1-202ENST00000525801 CDC42BPBQ9Y5S2 1711 aa23.62■■□□□ 1.37
ROM1-202ENST00000525801 DIP2CQ9Y2E4 1556 aa23.61■■□□□ 1.37
ROM1-202ENST00000525801 KDM5CP41229 1560 aa23.61■■□□□ 1.37
ROM1-202ENST00000525801 ABCA6Q8N139 1617 aa23.58■■□□□ 1.36
ROM1-202ENST00000525801 UHRF1BP1Q6BDS2 1440 aa23.58■■□□□ 1.36
ROM1-202ENST00000525801 MLH3Q9UHC1 1453 aa23.57■■□□□ 1.36
ROM1-202ENST00000525801 CFDP1Q9UEE9 299 aaPredicted RBP23.57■■□□□ 1.36
ROM1-202ENST00000525801 PREX2Q70Z35 1606 aa23.57■■□□□ 1.36
ROM1-202ENST00000525801 ABCC1P33527 1531 aa23.57■■□□□ 1.36
ROM1-202ENST00000525801 SPAG9O60271 1321 aaKnown RBP23.57■■□□□ 1.36
ROM1-202ENST00000525801 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
ROM1-202ENST00000525801 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
ROM1-202ENST00000525801 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
ROM1-202ENST00000525801 MTUS2Q5JR59 1369 aa23.52■■□□□ 1.36
ROM1-202ENST00000525801 PREX1Q8TCU6 1659 aa23.51■■□□□ 1.35
ROM1-202ENST00000525801 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
ROM1-202ENST00000525801 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
ROM1-202ENST00000525801 GGT6Q6P531 493 aa23.5■■□□□ 1.35
ROM1-202ENST00000525801 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
ROM1-202ENST00000525801 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
ROM1-202ENST00000525801 ZNF644Q9H582 1327 aaPredicted RBP23.49■■□□□ 1.35
ROM1-202ENST00000525801 SAMD9LQ8IVG5 1584 aa23.47■■□□□ 1.35
ROM1-202ENST00000525801 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
ROM1-202ENST00000525801 REREQ9P2R6 1566 aa23.44■■□□□ 1.34
ROM1-202ENST00000525801 C3P01024 1663 aa23.44■■□□□ 1.34
ROM1-202ENST00000525801 AGLP35573 1532 aa23.43■■□□□ 1.34
ROM1-202ENST00000525801 ZMYM3Q14202 1370 aa23.41■■□□□ 1.34
ROM1-202ENST00000525801 NCKAP5LQ9HCH0 1330 aa23.4■■□□□ 1.34
ROM1-202ENST00000525801 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
ROM1-202ENST00000525801 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
ROM1-202ENST00000525801 CNTLNQ9NXG0 1405 aa23.39■■□□□ 1.33
ROM1-202ENST00000525801 ATP7AQ04656 1500 aa23.37■■□□□ 1.33
ROM1-202ENST00000525801 A2MP01023 1474 aa23.36■■□□□ 1.33
ROM1-202ENST00000525801 PLEKHH2Q8IVE3 1493 aa23.35■■□□□ 1.33
ROM1-202ENST00000525801 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
ROM1-202ENST00000525801 SETD1BQ9UPS6 1966 aaKnown RBP23.34■■□□□ 1.33
ROM1-202ENST00000525801 CEP162Q5TB80 1403 aa23.33■■□□□ 1.32
ROM1-202ENST00000525801 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
ROM1-202ENST00000525801 PTPRTO14522 1441 aa23.31■■□□□ 1.32
ROM1-202ENST00000525801 CLTCQ00610 1675 aaKnown RBP23.29■■□□□ 1.32
ROM1-202ENST00000525801 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
ROM1-202ENST00000525801 CAMSAP1Q5T5Y3 1602 aa23.29■■□□□ 1.32
ROM1-202ENST00000525801 DISP3Q9P2K9 1392 aa23.28■■□□□ 1.32
ROM1-202ENST00000525801 KIF3BO15066 747 aa23.28■■□□□ 1.32
ROM1-202ENST00000525801 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
ROM1-202ENST00000525801 ZNF335Q9H4Z2 1342 aaPredicted RBP23.26■■□□□ 1.31
ROM1-202ENST00000525801 INO80Q9ULG1 1556 aaPredicted RBP23.26■■□□□ 1.31
ROM1-202ENST00000525801 NPATQ14207 1427 aa23.25■■□□□ 1.31
ROM1-202ENST00000525801 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
ROM1-202ENST00000525801 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
ROM1-202ENST00000525801 PTPRKQ15262 1439 aa23.23■■□□□ 1.31
ROM1-202ENST00000525801 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
ROM1-202ENST00000525801 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
ROM1-202ENST00000525801 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.3
ROM1-202ENST00000525801 UBAP1LF5GYI3 381 aa23.2■■□□□ 1.3
ROM1-202ENST00000525801 MROH2AA6NES4 1674 aa23.19■■□□□ 1.3
ROM1-202ENST00000525801 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
ROM1-202ENST00000525801 WASHC2CQ9Y4E1 1318 aa23.19■■□□□ 1.3
ROM1-202ENST00000525801 TSPY4P0CV99 314 aa23.18■■□□□ 1.3
ROM1-202ENST00000525801 TSPY10P0CW01 314 aa23.18■■□□□ 1.3
ROM1-202ENST00000525801 LTBP4Q8N2S1 1624 aa23.18■■□□□ 1.3
ROM1-202ENST00000525801 PKD2Q13563 968 aa23.17■■□□□ 1.3
ROM1-202ENST00000525801 ILDR2Q71H61 639 aa23.17■■□□□ 1.3
ROM1-202ENST00000525801 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
ROM1-202ENST00000525801 CAMSAP2Q08AD1 1489 aa23.16■■□□□ 1.3
ROM1-202ENST00000525801 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
ROM1-202ENST00000525801 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
ROM1-202ENST00000525801 ADGBQ8N7X0 1667 aa23.14■■□□□ 1.29
ROM1-202ENST00000525801 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.29
ROM1-202ENST00000525801 RTEL1-TNFRSF6BF6WH68 1400 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms