RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 KDM6BO15054 1643 aa19.24■□□□□ 0.67
CCS-202ENST00000525435 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
CCS-202ENST00000525435 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
CCS-202ENST00000525435 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
CCS-202ENST00000525435 SUPT6HQ7KZ85 1726 aaKnown RBP19.22■□□□□ 0.67
CCS-202ENST00000525435 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
CCS-202ENST00000525435 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
CCS-202ENST00000525435 RAPGEF3O95398 923 aa19.2■□□□□ 0.66
CCS-202ENST00000525435 ADGRL1O94910 1474 aa19.2■□□□□ 0.66
CCS-202ENST00000525435 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
CCS-202ENST00000525435 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
CCS-202ENST00000525435 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
CCS-202ENST00000525435 PLEKHH2Q8IVE3 1493 aa19.18■□□□□ 0.66
CCS-202ENST00000525435 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
CCS-202ENST00000525435 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
CCS-202ENST00000525435 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
CCS-202ENST00000525435 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
CCS-202ENST00000525435 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
CCS-202ENST00000525435 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
CCS-202ENST00000525435 POGZQ7Z3K3 1410 aa19.13■□□□□ 0.65
CCS-202ENST00000525435 ZNF518AQ6AHZ1 1483 aa19.12■□□□□ 0.65
CCS-202ENST00000525435 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
CCS-202ENST00000525435 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCS-202ENST00000525435 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
CCS-202ENST00000525435 ITSN2Q9NZM3 1697 aa19.11■□□□□ 0.65
CCS-202ENST00000525435 ABCC1P33527 1531 aa19.1■□□□□ 0.65
CCS-202ENST00000525435 ARHGEF12Q9NZN5 1544 aa19.09■□□□□ 0.65
CCS-202ENST00000525435 TRAPPC8Q9Y2L5 1435 aa19.08■□□□□ 0.64
CCS-202ENST00000525435 SAMD9LQ8IVG5 1584 aa19.07■□□□□ 0.64
CCS-202ENST00000525435 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
CCS-202ENST00000525435 MBD5Q9P267 1494 aa19.07■□□□□ 0.64
CCS-202ENST00000525435 ZMYM4Q5VZL5 1548 aa19.06■□□□□ 0.64
CCS-202ENST00000525435 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
CCS-202ENST00000525435 FGD6Q6ZV73 1430 aa19.05■□□□□ 0.64
CCS-202ENST00000525435 FRMPD1Q5SYB0 1578 aa19.05■□□□□ 0.64
CCS-202ENST00000525435 RICTORQ6R327 1708 aa19.05■□□□□ 0.64
CCS-202ENST00000525435 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
CCS-202ENST00000525435 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
CCS-202ENST00000525435 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
CCS-202ENST00000525435 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
CCS-202ENST00000525435 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
CCS-202ENST00000525435 KDM5CP41229 1560 aa19.02■□□□□ 0.64
CCS-202ENST00000525435 SYCP2Q9BX26 1530 aa19.02■□□□□ 0.64
CCS-202ENST00000525435 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
CCS-202ENST00000525435 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
CCS-202ENST00000525435 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
CCS-202ENST00000525435 ATP10AO60312 1499 aa18.98■□□□□ 0.63
CCS-202ENST00000525435 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
CCS-202ENST00000525435 ARHGEF5Q12774 1597 aa18.98■□□□□ 0.63
CCS-202ENST00000525435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCS-202ENST00000525435 ZFYVE16Q7Z3T8 1539 aa18.97■□□□□ 0.63
CCS-202ENST00000525435 YEATS2Q9ULM3 1422 aa18.97■□□□□ 0.63
CCS-202ENST00000525435 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
CCS-202ENST00000525435 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
CCS-202ENST00000525435 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
CCS-202ENST00000525435 ARHGEF40Q8TER5 1519 aa18.93■□□□□ 0.62
CCS-202ENST00000525435 C9orf84Q5VXU9 1444 aa18.92■□□□□ 0.62
CCS-202ENST00000525435 ABCC5O15440 1437 aa18.91■□□□□ 0.62
CCS-202ENST00000525435 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
CCS-202ENST00000525435 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
CCS-202ENST00000525435 RRBP1Q9P2E9 1410 aaKnown RBP18.9■□□□□ 0.62
CCS-202ENST00000525435 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
CCS-202ENST00000525435 DAPK1P53355 1430 aa18.89■□□□□ 0.61
CCS-202ENST00000525435 SHANK2Q9UPX8 1470 aa18.88■□□□□ 0.61
CCS-202ENST00000525435 REREQ9P2R6 1566 aa18.88■□□□□ 0.61
CCS-202ENST00000525435 KIDINS220Q9ULH0 1771 aa18.88■□□□□ 0.61
CCS-202ENST00000525435 DHX29Q7Z478 1369 aaKnown RBP18.87■□□□□ 0.61
CCS-202ENST00000525435 INO80Q9ULG1 1556 aaPredicted RBP18.86■□□□□ 0.61
CCS-202ENST00000525435 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
CCS-202ENST00000525435 MAST1Q9Y2H9 1570 aa18.85■□□□□ 0.61
CCS-202ENST00000525435 AGLP35573 1532 aa18.84■□□□□ 0.61
CCS-202ENST00000525435 A2MP01023 1474 aa18.84■□□□□ 0.61
CCS-202ENST00000525435 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
CCS-202ENST00000525435 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.61
CCS-202ENST00000525435 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
CCS-202ENST00000525435 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
CCS-202ENST00000525435 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
CCS-202ENST00000525435 NCOA1Q15788 1441 aa18.81■□□□□ 0.6
CCS-202ENST00000525435 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
CCS-202ENST00000525435 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
CCS-202ENST00000525435 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
CCS-202ENST00000525435 ADGRL2O95490 1459 aa18.77■□□□□ 0.6
CCS-202ENST00000525435 ADGBQ8N7X0 1667 aa18.76■□□□□ 0.59
CCS-202ENST00000525435 PTPRKQ15262 1439 aa18.76■□□□□ 0.59
CCS-202ENST00000525435 KIF3BO15066 747 aa18.76■□□□□ 0.59
CCS-202ENST00000525435 MLECQ14165 292 aa18.76■□□□□ 0.59
CCS-202ENST00000525435 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
CCS-202ENST00000525435 ITGAEP38570 1179 aa18.75■□□□□ 0.59
CCS-202ENST00000525435 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
CCS-202ENST00000525435 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
CCS-202ENST00000525435 GGT6Q6P531 493 aa18.73■□□□□ 0.59
CCS-202ENST00000525435 CROCC2H7BZ55 1655 aa18.73■□□□□ 0.59
CCS-202ENST00000525435 BCORL1Q5H9F3 1711 aa18.72■□□□□ 0.59
CCS-202ENST00000525435 ERBINQ96RT1 1412 aa18.72■□□□□ 0.59
CCS-202ENST00000525435 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
CCS-202ENST00000525435 SIGLEC1Q9BZZ2 1709 aa18.7■□□□□ 0.58
CCS-202ENST00000525435 CNTLNQ9NXG0 1405 aa18.69■□□□□ 0.58
CCS-202ENST00000525435 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
CCS-202ENST00000525435 WASHC2CQ9Y4E1 1318 aa18.65■□□□□ 0.58
CCS-202ENST00000525435 PTPRMP28827 1452 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms