RNA–Protein interactions for RNA: ENST00000524956.4

TRIM29-205, Transcript of tripartite motif containing 29, humanhuman

TSL 5

Gene TRIM29, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-205ENST00000524956 C9orf84Q5VXU9 1444 aa13.43□□□□□ -0.26
TRIM29-205ENST00000524956 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
TRIM29-205ENST00000524956 EEA1Q15075 1411 aa13.41□□□□□ -0.26
TRIM29-205ENST00000524956 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
TRIM29-205ENST00000524956 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
TRIM29-205ENST00000524956 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
TRIM29-205ENST00000524956 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
TRIM29-205ENST00000524956 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
TRIM29-205ENST00000524956 CDK13Q14004 1512 aaKnown RBP13.4□□□□□ -0.26
TRIM29-205ENST00000524956 KIF14Q15058 1648 aa13.4□□□□□ -0.26
TRIM29-205ENST00000524956 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
TRIM29-205ENST00000524956 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
TRIM29-205ENST00000524956 ATP10AO60312 1499 aa13.38□□□□□ -0.27
TRIM29-205ENST00000524956 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
TRIM29-205ENST00000524956 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
TRIM29-205ENST00000524956 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
TRIM29-205ENST00000524956 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
TRIM29-205ENST00000524956 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
TRIM29-205ENST00000524956 PLCH2O75038 1416 aa13.35□□□□□ -0.27
TRIM29-205ENST00000524956 CLIP1P30622 1438 aa13.35□□□□□ -0.27
TRIM29-205ENST00000524956 CDK11AQ9UQ88 783 aaPredicted RBP13.34□□□□□ -0.27
TRIM29-205ENST00000524956 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
TRIM29-205ENST00000524956 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
TRIM29-205ENST00000524956 FMN1Q68DA7 1419 aa13.32□□□□□ -0.28
TRIM29-205ENST00000524956 SOCS7O14512 581 aa13.32□□□□□ -0.28
TRIM29-205ENST00000524956 C3P01024 1663 aa13.31□□□□□ -0.28
TRIM29-205ENST00000524956 KDM5CP41229 1560 aa13.31□□□□□ -0.28
TRIM29-205ENST00000524956 DIP2CQ9Y2E4 1556 aa13.3□□□□□ -0.28
TRIM29-205ENST00000524956 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
TRIM29-205ENST00000524956 REREQ9P2R6 1566 aa13.28□□□□□ -0.28
TRIM29-205ENST00000524956 ABCA6Q8N139 1617 aa13.28□□□□□ -0.28
TRIM29-205ENST00000524956 SUPT6HQ7KZ85 1726 aaKnown RBP13.28□□□□□ -0.28
TRIM29-205ENST00000524956 PTPRTO14522 1441 aa13.27□□□□□ -0.29
TRIM29-205ENST00000524956 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
TRIM29-205ENST00000524956 PREX2Q70Z35 1606 aa13.26□□□□□ -0.29
TRIM29-205ENST00000524956 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
TRIM29-205ENST00000524956 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
TRIM29-205ENST00000524956 TROQ12816 1431 aaPredicted RBP13.25□□□□□ -0.29
TRIM29-205ENST00000524956 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
TRIM29-205ENST00000524956 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
TRIM29-205ENST00000524956 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
TRIM29-205ENST00000524956 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
TRIM29-205ENST00000524956 ABCC1P33527 1531 aa13.23□□□□□ -0.29
TRIM29-205ENST00000524956 AGLP35573 1532 aa13.23□□□□□ -0.29
TRIM29-205ENST00000524956 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
TRIM29-205ENST00000524956 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
TRIM29-205ENST00000524956 AFAP1Q8N556 730 aa13.21□□□□□ -0.29
TRIM29-205ENST00000524956 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.3
TRIM29-205ENST00000524956 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
TRIM29-205ENST00000524956 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.3
TRIM29-205ENST00000524956 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
TRIM29-205ENST00000524956 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
TRIM29-205ENST00000524956 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
TRIM29-205ENST00000524956 LTBP4Q8N2S1 1624 aa13.18□□□□□ -0.3
TRIM29-205ENST00000524956 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
TRIM29-205ENST00000524956 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
TRIM29-205ENST00000524956 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
TRIM29-205ENST00000524956 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
TRIM29-205ENST00000524956 NPATQ14207 1427 aa13.16□□□□□ -0.3
TRIM29-205ENST00000524956 CLTCQ00610 1675 aaKnown RBP13.15□□□□□ -0.3
TRIM29-205ENST00000524956 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
TRIM29-205ENST00000524956 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
TRIM29-205ENST00000524956 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
TRIM29-205ENST00000524956 CEP170BQ9Y4F5 1589 aaPredicted RBP13.13□□□□□ -0.31
TRIM29-205ENST00000524956 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
TRIM29-205ENST00000524956 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
TRIM29-205ENST00000524956 ATP7AQ04656 1500 aa13.12□□□□□ -0.31
TRIM29-205ENST00000524956 PLA2R1Q13018 1463 aa13.11□□□□□ -0.31
TRIM29-205ENST00000524956 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
TRIM29-205ENST00000524956 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
TRIM29-205ENST00000524956 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
TRIM29-205ENST00000524956 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.31
TRIM29-205ENST00000524956 ZMYM3Q14202 1370 aa13.08□□□□□ -0.31
TRIM29-205ENST00000524956 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
TRIM29-205ENST00000524956 CASKIN1Q8WXD9 1431 aa13.08□□□□□ -0.32
TRIM29-205ENST00000524956 PKD2Q13563 968 aa13.08□□□□□ -0.32
TRIM29-205ENST00000524956 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
TRIM29-205ENST00000524956 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
TRIM29-205ENST00000524956 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
TRIM29-205ENST00000524956 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
TRIM29-205ENST00000524956 PLXNC1O60486 1568 aa13.07□□□□□ -0.32
TRIM29-205ENST00000524956 A2MP01023 1474 aa13.06□□□□□ -0.32
TRIM29-205ENST00000524956 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
TRIM29-205ENST00000524956 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
TRIM29-205ENST00000524956 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
TRIM29-205ENST00000524956 CPS1P31327 1500 aa13.03□□□□□ -0.32
TRIM29-205ENST00000524956 GGT6Q6P531 493 aa13.03□□□□□ -0.32
TRIM29-205ENST00000524956 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
TRIM29-205ENST00000524956 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
TRIM29-205ENST00000524956 PTPRKQ15262 1439 aa13.02□□□□□ -0.33
TRIM29-205ENST00000524956 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
TRIM29-205ENST00000524956 TOM1O60784 492 aa13.01□□□□□ -0.33
TRIM29-205ENST00000524956 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
TRIM29-205ENST00000524956 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
TRIM29-205ENST00000524956 KIAA1107Q9UPP5 1409 aa13□□□□□ -0.33
TRIM29-205ENST00000524956 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
TRIM29-205ENST00000524956 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
TRIM29-205ENST00000524956 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIM29-205ENST00000524956 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
TRIM29-205ENST00000524956 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms