RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 A0A0G2JS52 829 aa12.94□□□□□ -0.34
CTNND1-210ENST00000524630 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
CTNND1-210ENST00000524630 RCAN3Q9UKA8 241 aa12.94□□□□□ -0.34
CTNND1-210ENST00000524630 FOXD1Q16676 465 aa12.93□□□□□ -0.34
CTNND1-210ENST00000524630 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
CTNND1-210ENST00000524630 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
CTNND1-210ENST00000524630 WIZO95785 1651 aa12.93□□□□□ -0.34
CTNND1-210ENST00000524630 POGKQ9P215 609 aa12.92□□□□□ -0.34
CTNND1-210ENST00000524630 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
CTNND1-210ENST00000524630 OS9Q13438 667 aaPredicted RBP12.9□□□□□ -0.34
CTNND1-210ENST00000524630 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
CTNND1-210ENST00000524630 SLKQ9H2G2 1235 aaPredicted RBP12.9□□□□□ -0.34
CTNND1-210ENST00000524630 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
CTNND1-210ENST00000524630 PTMSP20962 102 aa12.89□□□□□ -0.35
CTNND1-210ENST00000524630 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
CTNND1-210ENST00000524630 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
CTNND1-210ENST00000524630 GBP4Q96PP9 640 aa12.88□□□□□ -0.35
CTNND1-210ENST00000524630 RALBP1Q15311 655 aa12.87□□□□□ -0.35
CTNND1-210ENST00000524630 MCCP23508 829 aa12.87□□□□□ -0.35
CTNND1-210ENST00000524630 KCNJ4P48050 445 aa12.87□□□□□ -0.35
CTNND1-210ENST00000524630 PKD2Q13563 968 aa12.86□□□□□ -0.35
CTNND1-210ENST00000524630 MPHOSPH9Q99550 1183 aa12.86□□□□□ -0.35
CTNND1-210ENST00000524630 KANK1Q14678 1352 aa12.85□□□□□ -0.35
CTNND1-210ENST00000524630 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
CTNND1-210ENST00000524630 FGD1P98174 961 aa12.85□□□□□ -0.35
CTNND1-210ENST00000524630 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-210ENST00000524630 GOLGA6L4A6NEF3 574 aa12.84□□□□□ -0.35
CTNND1-210ENST00000524630 NRDCO43847 1150 aa12.84□□□□□ -0.35
CTNND1-210ENST00000524630 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
CTNND1-210ENST00000524630 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
CTNND1-210ENST00000524630 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
CTNND1-210ENST00000524630 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
CTNND1-210ENST00000524630 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
CTNND1-210ENST00000524630 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
CTNND1-210ENST00000524630 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
CTNND1-210ENST00000524630 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
CTNND1-210ENST00000524630 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
CTNND1-210ENST00000524630 MFAP1P55081 439 aaKnown RBP12.8□□□□□ -0.36
CTNND1-210ENST00000524630 USP35Q9P2H5 1018 aa12.8□□□□□ -0.36
CTNND1-210ENST00000524630 APBB1O00213 710 aa12.79□□□□□ -0.36
CTNND1-210ENST00000524630 IPO8O15397 1037 aaKnown RBP12.79□□□□□ -0.36
CTNND1-210ENST00000524630 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
CTNND1-210ENST00000524630 GSE1Q14687 1217 aa12.78□□□□□ -0.36
CTNND1-210ENST00000524630 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
CTNND1-210ENST00000524630 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
CTNND1-210ENST00000524630 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
CTNND1-210ENST00000524630 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTNND1-210ENST00000524630 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
CTNND1-210ENST00000524630 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.36
CTNND1-210ENST00000524630 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
CTNND1-210ENST00000524630 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
CTNND1-210ENST00000524630 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
CTNND1-210ENST00000524630 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
CTNND1-210ENST00000524630 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
CTNND1-210ENST00000524630 NUP155O75694 1391 aa12.75□□□□□ -0.37
CTNND1-210ENST00000524630 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
CTNND1-210ENST00000524630 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-210ENST00000524630 SOX12O15370 315 aa12.74□□□□□ -0.37
CTNND1-210ENST00000524630 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
CTNND1-210ENST00000524630 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
CTNND1-210ENST00000524630 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
CTNND1-210ENST00000524630 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
CTNND1-210ENST00000524630 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.372e-10■■□□□ 12.3
CTNND1-210ENST00000524630 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
CTNND1-210ENST00000524630 ANKRD30AQ9BXX3 1397 aa12.73□□□□□ -0.37
CTNND1-210ENST00000524630 RTF1Q92541 710 aaKnown RBP12.73□□□□□ -0.37
CTNND1-210ENST00000524630 EIF3AQ14152 1382 aaKnown RBP12.73□□□□□ -0.37
CTNND1-210ENST00000524630 PDE4AP27815 886 aa12.73□□□□□ -0.37
CTNND1-210ENST00000524630 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
CTNND1-210ENST00000524630 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
CTNND1-210ENST00000524630 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
CTNND1-210ENST00000524630 STK26Q9P289 416 aa12.72□□□□□ -0.37
CTNND1-210ENST00000524630 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
CTNND1-210ENST00000524630 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
CTNND1-210ENST00000524630 SMC4Q9NTJ3 1288 aa12.72□□□□□ -0.37
CTNND1-210ENST00000524630 CENPJQ9HC77 1338 aaPredicted RBP12.71□□□□□ -0.38
CTNND1-210ENST00000524630 MYBBP1AQ9BQG0 1328 aaKnown RBP12.7□□□□□ -0.38
CTNND1-210ENST00000524630 NLRP13Q86W25 1043 aa12.7□□□□□ -0.38
CTNND1-210ENST00000524630 PHLDB1Q86UU1 1377 aa12.7□□□□□ -0.38
CTNND1-210ENST00000524630 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
CTNND1-210ENST00000524630 ZBED9Q6R2W3 1325 aa12.68□□□□□ -0.38
CTNND1-210ENST00000524630 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
CTNND1-210ENST00000524630 CENPQQ7L2Z9 268 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-210ENST00000524630 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
CTNND1-210ENST00000524630 CLUAP1Q96AJ1 413 aa12.68□□□□□ -0.38
CTNND1-210ENST00000524630 RUSC2Q8N2Y8 1516 aa12.68□□□□□ -0.38
CTNND1-210ENST00000524630 EXOC6Q8TAG9 804 aa12.67□□□□□ -0.38
CTNND1-210ENST00000524630 PLIN1O60240 522 aa12.67□□□□□ -0.38
CTNND1-210ENST00000524630 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
CTNND1-210ENST00000524630 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
CTNND1-210ENST00000524630 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
CTNND1-210ENST00000524630 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
CTNND1-210ENST00000524630 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
CTNND1-210ENST00000524630 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
CTNND1-210ENST00000524630 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
CTNND1-210ENST00000524630 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
CTNND1-210ENST00000524630 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
CTNND1-210ENST00000524630 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
CTNND1-210ENST00000524630 PHF14O94880 888 aa12.63□□□□□ -0.39
CTNND1-210ENST00000524630 NPHP1O15259 732 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms