RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
VPS13B-212ENST00000524330 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
VPS13B-212ENST00000524330 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
VPS13B-212ENST00000524330 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.08
VPS13B-212ENST00000524330 NAIPQ13075 1403 aa14.57□□□□□ -0.08
VPS13B-212ENST00000524330 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
VPS13B-212ENST00000524330 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
VPS13B-212ENST00000524330 ABCC5O15440 1437 aa14.56□□□□□ -0.08
VPS13B-212ENST00000524330 PTPRKQ15262 1439 aa14.56□□□□□ -0.08
VPS13B-212ENST00000524330 PREX2Q70Z35 1606 aa14.55□□□□□ -0.08
VPS13B-212ENST00000524330 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
VPS13B-212ENST00000524330 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
VPS13B-212ENST00000524330 SHANK2Q9UPX8 1470 aa14.54□□□□□ -0.08
VPS13B-212ENST00000524330 ADGBQ8N7X0 1667 aa14.54□□□□□ -0.08
VPS13B-212ENST00000524330 MYO5CQ9NQX4 1742 aa14.54□□□□□ -0.08
VPS13B-212ENST00000524330 ARHGAP5Q13017 1502 aa14.53□□□□□ -0.08
VPS13B-212ENST00000524330 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
VPS13B-212ENST00000524330 TIMELESSQ9UNS1 1208 aa14.53□□□□□ -0.08
VPS13B-212ENST00000524330 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.08
VPS13B-212ENST00000524330 EFCAB2Q5VUJ9 269 aa14.52□□□□□ -0.09
VPS13B-212ENST00000524330 KCNH8Q96L42 1107 aa14.52□□□□□ -0.09
VPS13B-212ENST00000524330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS13B-212ENST00000524330 WDR7Q9Y4E6 1490 aa14.51□□□□□ -0.09
VPS13B-212ENST00000524330 ZNF644Q9H582 1327 aaPredicted RBP14.51□□□□□ -0.09
VPS13B-212ENST00000524330 CROCC2H7BZ55 1655 aa14.51□□□□□ -0.09
VPS13B-212ENST00000524330 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
VPS13B-212ENST00000524330 ARAP3Q8WWN8 1544 aa14.5□□□□□ -0.09
VPS13B-212ENST00000524330 TRIM52Q96A61 297 aa14.49□□□□□ -0.09
VPS13B-212ENST00000524330 CCDC141Q6ZP82 1450 aa14.49□□□□□ -0.09
VPS13B-212ENST00000524330 PLCH2O75038 1416 aa14.49□□□□□ -0.09
VPS13B-212ENST00000524330 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
VPS13B-212ENST00000524330 CDC42BPBQ9Y5S2 1711 aa14.48□□□□□ -0.09
VPS13B-212ENST00000524330 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
VPS13B-212ENST00000524330 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
VPS13B-212ENST00000524330 NCOA1Q15788 1441 aa14.46□□□□□ -0.09
VPS13B-212ENST00000524330 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
VPS13B-212ENST00000524330 ASXL2Q76L83 1435 aa14.44□□□□□ -0.1
VPS13B-212ENST00000524330 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
VPS13B-212ENST00000524330 HNRNPMP52272 730 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS13B-212ENST00000524330 MBD5Q9P267 1494 aa14.42□□□□□ -0.1
VPS13B-212ENST00000524330 MAST1Q9Y2H9 1570 aa14.42□□□□□ -0.1
VPS13B-212ENST00000524330 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
VPS13B-212ENST00000524330 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
VPS13B-212ENST00000524330 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
VPS13B-212ENST00000524330 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
VPS13B-212ENST00000524330 MPHOSPH9Q99550 1183 aa14.39□□□□□ -0.11
VPS13B-212ENST00000524330 CFAP74Q9C0B2 1584 aa14.39□□□□□ -0.11
VPS13B-212ENST00000524330 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
VPS13B-212ENST00000524330 KIF15Q9NS87 1388 aa14.38□□□□□ -0.11
VPS13B-212ENST00000524330 ABCC1P33527 1531 aa14.37□□□□□ -0.11
VPS13B-212ENST00000524330 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
VPS13B-212ENST00000524330 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
VPS13B-212ENST00000524330 FANCAO15360 1455 aa14.36□□□□□ -0.11
VPS13B-212ENST00000524330 PLXNC1O60486 1568 aa14.35□□□□□ -0.11
VPS13B-212ENST00000524330 RTEL1-TNFRSF6BF6WH68 1400 aa14.34□□□□□ -0.11
VPS13B-212ENST00000524330 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.11
VPS13B-212ENST00000524330 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.11
VPS13B-212ENST00000524330 KDM6BO15054 1643 aa14.33□□□□□ -0.11
VPS13B-212ENST00000524330 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.11
VPS13B-212ENST00000524330 DUOX2Q9NRD8 1548 aa14.33□□□□□ -0.12
VPS13B-212ENST00000524330 SPAG9O60271 1321 aaKnown RBP14.33□□□□□ -0.12
VPS13B-212ENST00000524330 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
VPS13B-212ENST00000524330 SIN3AQ96ST3 1273 aa14.32□□□□□ -0.12
VPS13B-212ENST00000524330 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
VPS13B-212ENST00000524330 ADGRL1O94910 1474 aa14.31□□□□□ -0.12
VPS13B-212ENST00000524330 NUP155O75694 1391 aa14.3□□□□□ -0.12
VPS13B-212ENST00000524330 ERBINQ96RT1 1412 aa14.3□□□□□ -0.12
VPS13B-212ENST00000524330 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
VPS13B-212ENST00000524330 MYT1LQ9UL68 1186 aa14.29□□□□□ -0.12
VPS13B-212ENST00000524330 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.12
VPS13B-212ENST00000524330 NEO1Q92859 1461 aa14.27□□□□□ -0.12
VPS13B-212ENST00000524330 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.12
VPS13B-212ENST00000524330 TRAPPC8Q9Y2L5 1435 aa14.26□□□□□ -0.13
VPS13B-212ENST00000524330 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
VPS13B-212ENST00000524330 GLI2P10070 1586 aa14.26□□□□□ -0.13
VPS13B-212ENST00000524330 PZPP20742 1482 aa14.25□□□□□ -0.13
VPS13B-212ENST00000524330 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
VPS13B-212ENST00000524330 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
VPS13B-212ENST00000524330 PKD2Q13563 968 aa14.24□□□□□ -0.13
VPS13B-212ENST00000524330 UNC13BO14795 1591 aa14.24□□□□□ -0.13
VPS13B-212ENST00000524330 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
VPS13B-212ENST00000524330 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
VPS13B-212ENST00000524330 KANK1Q14678 1352 aa14.22□□□□□ -0.13
VPS13B-212ENST00000524330 ZFYVE16Q7Z3T8 1539 aa14.22□□□□□ -0.13
VPS13B-212ENST00000524330 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
VPS13B-212ENST00000524330 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
VPS13B-212ENST00000524330 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.14
VPS13B-212ENST00000524330 DENND4BO75064 1496 aaPredicted RBP14.2□□□□□ -0.14
VPS13B-212ENST00000524330 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
VPS13B-212ENST00000524330 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
VPS13B-212ENST00000524330 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
VPS13B-212ENST00000524330 POGZQ7Z3K3 1410 aa14.18□□□□□ -0.14
VPS13B-212ENST00000524330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS13B-212ENST00000524330 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
VPS13B-212ENST00000524330 IQGAP3Q86VI3 1631 aa14.18□□□□□ -0.14
VPS13B-212ENST00000524330 MAP3K4Q9Y6R4 1608 aa14.18□□□□□ -0.14
VPS13B-212ENST00000524330 MAGI2Q86UL8 1455 aa14.17□□□□□ -0.14
VPS13B-212ENST00000524330 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
VPS13B-212ENST00000524330 FAM69CQ0P6D2 419 aa14.16□□□□□ -0.14
VPS13B-212ENST00000524330 FOXD1Q16676 465 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms