RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ABCC5O15440 1437 aa30.76■■■□□ 2.52
SQLE-206ENST00000523430 TTC37Q6PGP7 1564 aa30.76■■■□□ 2.51
SQLE-206ENST00000523430 MAPKBP1O60336 1514 aa30.75■■■□□ 2.51
SQLE-206ENST00000523430 AKNAQ7Z591 1439 aa30.75■■■□□ 2.51
SQLE-206ENST00000523430 CHIC2Q9UKJ5 165 aa30.74■■■□□ 2.51
SQLE-206ENST00000523430 PREX2Q70Z35 1606 aa30.73■■■□□ 2.51
SQLE-206ENST00000523430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.72■■■□□ 2.517e-7■■□□□ 13.4
SQLE-206ENST00000523430 ZNF777Q9ULD5 760 aaPredicted RBP30.7■■■□□ 2.51
SQLE-206ENST00000523430 CROCC2H7BZ55 1655 aa30.7■■■□□ 2.51
SQLE-206ENST00000523430 RRP7BPQ9NSQ0 103 aa30.69■■■□□ 2.5
SQLE-206ENST00000523430 CDC42BPBQ9Y5S2 1711 aa30.68■■■□□ 2.5
SQLE-206ENST00000523430 KDM6BO15054 1643 aa30.66■■■□□ 2.5
SQLE-206ENST00000523430 ROCK1Q13464 1354 aa30.64■■■□□ 2.5
SQLE-206ENST00000523430 SAMD9LQ8IVG5 1584 aa30.62■■■□□ 2.49
SQLE-206ENST00000523430 ADGBQ8N7X0 1667 aa30.62■■■□□ 2.49
SQLE-206ENST00000523430 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
SQLE-206ENST00000523430 KCNH8Q96L42 1107 aa30.57■■■□□ 2.48
SQLE-206ENST00000523430 ARHGAP5Q13017 1502 aa30.57■■■□□ 2.48
SQLE-206ENST00000523430 WDR7Q9Y4E6 1490 aa30.55■■■□□ 2.48
SQLE-206ENST00000523430 ADGRL2O95490 1459 aa30.54■■■□□ 2.48
SQLE-206ENST00000523430 ARHGEF5Q12774 1597 aa30.53■■■□□ 2.48
SQLE-206ENST00000523430 SHANK2Q9UPX8 1470 aa30.53■■■□□ 2.48
SQLE-206ENST00000523430 MBD5Q9P267 1494 aa30.51■■■□□ 2.47
SQLE-206ENST00000523430 NCOA1Q15788 1441 aa30.49■■■□□ 2.47
SQLE-206ENST00000523430 SYCP2Q9BX26 1530 aa30.48■■■□□ 2.47
SQLE-206ENST00000523430 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
SQLE-206ENST00000523430 PLCH2O75038 1416 aa30.45■■■□□ 2.47
SQLE-206ENST00000523430 CCDC141Q6ZP82 1450 aa30.45■■■□□ 2.46
SQLE-206ENST00000523430 ASXL2Q76L83 1435 aa30.45■■■□□ 2.46
SQLE-206ENST00000523430 HNRNPMP52272 730 aaKnown RBP eCLIP30.44■■■□□ 2.461e-6■■■■■ 34.2
SQLE-206ENST00000523430 ANKRD30AQ9BXX3 1397 aa30.42■■■□□ 2.46
SQLE-206ENST00000523430 DENND4BO75064 1496 aaPredicted RBP30.4■■■□□ 2.46
SQLE-206ENST00000523430 ABCA9Q8IUA7 1624 aa30.39■■■□□ 2.46
SQLE-206ENST00000523430 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
SQLE-206ENST00000523430 SIN3AQ96ST3 1273 aa30.37■■■□□ 2.45
SQLE-206ENST00000523430 TRIM52Q96A61 297 aa30.36■■■□□ 2.45
SQLE-206ENST00000523430 ABCC1P33527 1531 aa30.36■■■□□ 2.45
SQLE-206ENST00000523430 ARAP3Q8WWN8 1544 aa30.36■■■□□ 2.45
SQLE-206ENST00000523430 KIAA1107Q9UPP5 1409 aa30.35■■■□□ 2.45
SQLE-206ENST00000523430 ARHGEF12Q9NZN5 1544 aa30.35■■■□□ 2.45
SQLE-206ENST00000523430 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
SQLE-206ENST00000523430 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
SQLE-206ENST00000523430 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
SQLE-206ENST00000523430 TSPY4P0CV99 314 aa30.33■■■□□ 2.45
SQLE-206ENST00000523430 TSPY10P0CW01 314 aa30.33■■■□□ 2.45
SQLE-206ENST00000523430 MAST1Q9Y2H9 1570 aa30.33■■■□□ 2.45
SQLE-206ENST00000523430 NPM1P06748 294 aaKnown RBP eCLIP30.3■■■□□ 2.44
SQLE-206ENST00000523430 NEUROD1Q13562 356 aa30.3■■■□□ 2.44
SQLE-206ENST00000523430 ANKRD50Q9ULJ7 1429 aa30.3■■■□□ 2.44
SQLE-206ENST00000523430 EFCAB2Q5VUJ9 269 aa30.29■■■□□ 2.44
SQLE-206ENST00000523430 RSPH4AQ5TD94 716 aa30.28■■■□□ 2.44
SQLE-206ENST00000523430 KIF15Q9NS87 1388 aa30.28■■■□□ 2.44
SQLE-206ENST00000523430 MPHOSPH9Q99550 1183 aa30.25■■■□□ 2.43
SQLE-206ENST00000523430 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
SQLE-206ENST00000523430 PZPP20742 1482 aa30.23■■■□□ 2.43
SQLE-206ENST00000523430 FANCAO15360 1455 aa30.22■■■□□ 2.43
SQLE-206ENST00000523430 PLXNC1O60486 1568 aa30.22■■■□□ 2.43
SQLE-206ENST00000523430 TRAPPC8Q9Y2L5 1435 aa30.21■■■□□ 2.43
SQLE-206ENST00000523430 ZNF316A6NFI3 1004 aaPredicted RBP30.17■■■□□ 2.42
SQLE-206ENST00000523430 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
SQLE-206ENST00000523430 FOXD1Q16676 465 aa30.15■■■□□ 2.42
SQLE-206ENST00000523430 SLC4A1APQ9BWU0 796 aaKnown RBP30.13■■■□□ 2.41
SQLE-206ENST00000523430 KDM5DQ9BY66 1539 aa30.13■■■□□ 2.41
SQLE-206ENST00000523430 TIMELESSQ9UNS1 1208 aa30.12■■■□□ 2.41
SQLE-206ENST00000523430 TONSLQ96HA7 1378 aa30.11■■■□□ 2.41
SQLE-206ENST00000523430 ADGRL1O94910 1474 aa30.11■■■□□ 2.41
SQLE-206ENST00000523430 ZFYVE16Q7Z3T8 1539 aa30.1■■■□□ 2.41
SQLE-206ENST00000523430 DUOX2Q9NRD8 1548 aa30.07■■■□□ 2.4
SQLE-206ENST00000523430 ANKRD30BQ9BXX2 1392 aa30.06■■■□□ 2.4
SQLE-206ENST00000523430 CD109Q6YHK3 1445 aa30.06■■■□□ 2.4
SQLE-206ENST00000523430 NUP155O75694 1391 aa30.05■■■□□ 2.4
SQLE-206ENST00000523430 UNC13BO14795 1591 aa30.05■■■□□ 2.4
SQLE-206ENST00000523430 INO80Q9ULG1 1556 aaPredicted RBP30.05■■■□□ 2.4
SQLE-206ENST00000523430 CFAP74Q9C0B2 1584 aa30.04■■■□□ 2.4
SQLE-206ENST00000523430 SCAPERQ9BY12 1400 aa30.04■■■□□ 2.4
SQLE-206ENST00000523430 AFAP1Q8N556 730 aa30.04■■■□□ 2.4
SQLE-206ENST00000523430 SPAG9O60271 1321 aaKnown RBP30.01■■■□□ 2.39
SQLE-206ENST00000523430 RTEL1-TNFRSF6BF6WH68 1400 aa30.01■■■□□ 2.39
SQLE-206ENST00000523430 ERBINQ96RT1 1412 aa30.01■■■□□ 2.39
SQLE-206ENST00000523430 ATP7AQ04656 1500 aa30■■■□□ 2.39
SQLE-206ENST00000523430 PPP1R15AO75807 674 aaPredicted RBP29.99■■■□□ 2.39
SQLE-206ENST00000523430 FAM135AQ9P2D6 1515 aa29.98■■■□□ 2.39
SQLE-206ENST00000523430 RPRD2Q5VT52 1461 aaKnown RBP29.98■■■□□ 2.39
SQLE-206ENST00000523430 PKD2Q13563 968 aa29.97■■■□□ 2.39
SQLE-206ENST00000523430 MAP3K4Q9Y6R4 1608 aa29.95■■■□□ 2.39
SQLE-206ENST00000523430 DIEXFQ68CQ4 756 aaKnown RBP29.95■■■□□ 2.38
SQLE-206ENST00000523430 MAGI2Q86UL8 1455 aa29.93■■■□□ 2.38
SQLE-206ENST00000523430 IQGAP3Q86VI3 1631 aa29.92■■■□□ 2.38
SQLE-206ENST00000523430 GLI2P10070 1586 aa29.91■■■□□ 2.38
SQLE-206ENST00000523430 ZNF518AQ6AHZ1 1483 aa29.91■■■□□ 2.38
SQLE-206ENST00000523430 TEX14Q8IWB6 1497 aa29.9■■■□□ 2.38
SQLE-206ENST00000523430 POGZQ7Z3K3 1410 aa29.89■■■□□ 2.37
SQLE-206ENST00000523430 DIP2BQ9P265 1576 aa29.88■■■□□ 2.37
SQLE-206ENST00000523430 KDM5CP41229 1560 aa29.87■■■□□ 2.37
SQLE-206ENST00000523430 KIDINS220Q9ULH0 1771 aa29.87■■■□□ 2.37
SQLE-206ENST00000523430 NEO1Q92859 1461 aa29.87■■■□□ 2.37
SQLE-206ENST00000523430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.83■■■□□ 2.37
SQLE-206ENST00000523430 DEPDC5O75140 1603 aa29.81■■■□□ 2.36
SQLE-206ENST00000523430 L3MBTL2Q969R5 705 aa29.81■■■□□ 2.36
SQLE-206ENST00000523430 HECW2Q9P2P5 1572 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms