RNA–Protein interactions for RNA: ENST00000523133.1

MSC-AS1-209, MSC antisense RNA 1, humanhuman

TSL 3

Gene MSC-AS1, Length 494 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-209ENST00000523133 SYNJ2O15056 1496 aa8.55□□□□□ -1.04
MSC-AS1-209ENST00000523133 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
MSC-AS1-209ENST00000523133 PCDH10Q9P2E7 1040 aa8.54□□□□□ -1.04
MSC-AS1-209ENST00000523133 SCRIBQ14160 1630 aa8.52□□□□□ -1.05
MSC-AS1-209ENST00000523133 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
MSC-AS1-209ENST00000523133 EFCAB3Q8N7B9 438 aa8.52□□□□□ -1.05
MSC-AS1-209ENST00000523133 RIOK3O14730 519 aaKnown RBP8.5□□□□□ -1.05
MSC-AS1-209ENST00000523133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.49□□□□□ -1.05
MSC-AS1-209ENST00000523133 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
MSC-AS1-209ENST00000523133 ZFP91Q96JP5 570 aaPredicted RBP8.49□□□□□ -1.05
MSC-AS1-209ENST00000523133 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
MSC-AS1-209ENST00000523133 SNPHO15079 494 aa8.46□□□□□ -1.06
MSC-AS1-209ENST00000523133 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
MSC-AS1-209ENST00000523133 TMEM121BQ9BXQ6 578 aaPredicted RBP8.45□□□□□ -1.06
MSC-AS1-209ENST00000523133 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
MSC-AS1-209ENST00000523133 MS4A4AQ96JQ5 239 aa8.44□□□□□ -1.06
MSC-AS1-209ENST00000523133 PHF8Q9UPP1 1060 aa8.42□□□□□ -1.06
MSC-AS1-209ENST00000523133 MRC2Q9UBG0 1479 aa8.42□□□□□ -1.06
MSC-AS1-209ENST00000523133 WDR62O43379 1518 aa8.41□□□□□ -1.06
MSC-AS1-209ENST00000523133 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
MSC-AS1-209ENST00000523133 TMEM92Q6UXU6 159 aa8.4□□□□□ -1.06
MSC-AS1-209ENST00000523133 MICALL2Q8IY33 904 aa8.4□□□□□ -1.06
MSC-AS1-209ENST00000523133 ADGRL1O94910 1474 aa8.39□□□□□ -1.07
MSC-AS1-209ENST00000523133 POTEB3A0JP26 581 aa8.39□□□□□ -1.07
MSC-AS1-209ENST00000523133 G3V3G9 751 aa8.39□□□□□ -1.07
MSC-AS1-209ENST00000523133 SOX12O15370 315 aa8.39□□□□□ -1.07
MSC-AS1-209ENST00000523133 PKD2Q13563 968 aa8.39□□□□□ -1.07
MSC-AS1-209ENST00000523133 POTEBQ6S5H4 581 aa8.39□□□□□ -1.07
MSC-AS1-209ENST00000523133 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
MSC-AS1-209ENST00000523133 LAMC3Q9Y6N6 1575 aa8.36□□□□□ -1.07
MSC-AS1-209ENST00000523133 ECM2O94769 699 aaPredicted RBP8.36□□□□□ -1.07
MSC-AS1-209ENST00000523133 EMP3P54852 163 aa8.36□□□□□ -1.07
MSC-AS1-209ENST00000523133 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
MSC-AS1-209ENST00000523133 PDS5BQ9NTI5 1447 aa8.36□□□□□ -1.07
MSC-AS1-209ENST00000523133 RGL2O15211 777 aa8.35□□□□□ -1.07
MSC-AS1-209ENST00000523133 STK24Q9Y6E0 443 aa8.34□□□□□ -1.07
MSC-AS1-209ENST00000523133 FAM205CA6NFA0 338 aa8.33□□□□□ -1.08
MSC-AS1-209ENST00000523133 HS3ST6Q96QI5 342 aa8.33□□□□□ -1.08
MSC-AS1-209ENST00000523133 MFRPQ9BY79 579 aa8.33□□□□□ -1.08
MSC-AS1-209ENST00000523133 RSF1Q96T23 1441 aaPredicted RBP8.32□□□□□ -1.08
MSC-AS1-209ENST00000523133 MYO15BQ96JP2 1530 aa8.31□□□□□ -1.08
MSC-AS1-209ENST00000523133 STK25O00506 426 aa8.31□□□□□ -1.08
MSC-AS1-209ENST00000523133 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
MSC-AS1-209ENST00000523133 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
MSC-AS1-209ENST00000523133 NLRP6P59044 892 aa8.3□□□□□ -1.08
MSC-AS1-209ENST00000523133 SPNS2Q8IVW8 549 aa8.3□□□□□ -1.08
MSC-AS1-209ENST00000523133 KDM6BO15054 1643 aa8.29□□□□□ -1.08
MSC-AS1-209ENST00000523133 HOXB1P14653 301 aaPredicted RBP8.29□□□□□ -1.08
MSC-AS1-209ENST00000523133 DOK7Q18PE1 504 aa8.28□□□□□ -1.08
MSC-AS1-209ENST00000523133 TAOK2Q9UL54 1235 aa8.28□□□□□ -1.08
MSC-AS1-209ENST00000523133 ZNF710Q8N1W2 664 aa8.27□□□□□ -1.09
MSC-AS1-209ENST00000523133 NCAPD3P42695 1498 aa8.26□□□□□ -1.09
MSC-AS1-209ENST00000523133 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
MSC-AS1-209ENST00000523133 CHD1O14646 1710 aa8.26□□□□□ -1.09
MSC-AS1-209ENST00000523133 KIF13AQ9H1H9 1805 aa8.24□□□□□ -1.09
MSC-AS1-209ENST00000523133 GPR153Q6NV75 609 aa8.24□□□□□ -1.09
MSC-AS1-209ENST00000523133 KIF3CO14782 793 aa8.22□□□□□ -1.09
MSC-AS1-209ENST00000523133 PPP1R37O75864 691 aa8.21□□□□□ -1.1
MSC-AS1-209ENST00000523133 CERKQ8TCT0 537 aa8.21□□□□□ -1.1
MSC-AS1-209ENST00000523133 ERBB3P21860 1342 aa8.21□□□□□ -1.1
MSC-AS1-209ENST00000523133 RIMBP2O15034 1052 aa8.2□□□□□ -1.1
MSC-AS1-209ENST00000523133 KHSRPQ92945 711 aaKnown RBP eCLIP8.2□□□□□ -1.1
MSC-AS1-209ENST00000523133 ZSWIM6Q9HCJ5 1215 aa8.2□□□□□ -1.1
MSC-AS1-209ENST00000523133 C2orf72A6NCS6 295 aa8.19□□□□□ -1.1
MSC-AS1-209ENST00000523133 VARS2Q5ST30 1063 aaKnown RBP8.19□□□□□ -1.1
MSC-AS1-209ENST00000523133 ARSIQ5FYB1 569 aa8.18□□□□□ -1.1
MSC-AS1-209ENST00000523133 HMGXB3Q12766 1538 aa8.16□□□□□ -1.1
MSC-AS1-209ENST00000523133 CEP164Q9UPV0 1460 aa8.14□□□□□ -1.11
MSC-AS1-209ENST00000523133 HS6ST3Q8IZP7 471 aa8.14□□□□□ -1.11
MSC-AS1-209ENST00000523133 ZNF608Q9ULD9 1512 aaPredicted RBP8.13□□□□□ -1.11
MSC-AS1-209ENST00000523133 ZNF687Q8N1G0 1237 aa8.12□□□□□ -1.11
MSC-AS1-209ENST00000523133 ATAD2BQ9ULI0 1458 aa8.12□□□□□ -1.11
MSC-AS1-209ENST00000523133 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
MSC-AS1-209ENST00000523133 GAPVD1Q14C86 1478 aa8.11□□□□□ -1.11
MSC-AS1-209ENST00000523133 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
MSC-AS1-209ENST00000523133 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
MSC-AS1-209ENST00000523133 NUDT7P0C024 238 aa8.09□□□□□ -1.11
MSC-AS1-209ENST00000523133 SLC34A2O95436 690 aa8.08□□□□□ -1.12
MSC-AS1-209ENST00000523133 CHGAP10645 457 aaKnown RBP8.08□□□□□ -1.12
MSC-AS1-209ENST00000523133 TMC2Q8TDI7 906 aa8.08□□□□□ -1.12
MSC-AS1-209ENST00000523133 PCDHGA4Q9Y5G9 962 aa8.08□□□□□ -1.12
MSC-AS1-209ENST00000523133 EIF4G3O43432 1585 aaKnown RBP8.07□□□□□ -1.12
MSC-AS1-209ENST00000523133 SMARCA4P51532 1647 aa8.07□□□□□ -1.12
MSC-AS1-209ENST00000523133 FAM69CQ0P6D2 419 aa8.06□□□□□ -1.12
MSC-AS1-209ENST00000523133 BAZ1BQ9UIG0 1483 aaKnown RBP8.06□□□□□ -1.12
MSC-AS1-209ENST00000523133 CLASP1Q7Z460 1538 aa8.05□□□□□ -1.12
MSC-AS1-209ENST00000523133 POTEEQ6S8J3 1075 aa8.05□□□□□ -1.12
MSC-AS1-209ENST00000523133 LHX6Q9UPM6 363 aa8.05□□□□□ -1.12
MSC-AS1-209ENST00000523133 TSPOAP1O95153 1857 aa8.04□□□□□ -1.12
MSC-AS1-209ENST00000523133 MED1Q15648 1581 aaPredicted RBP8.03□□□□□ -1.12
MSC-AS1-209ENST00000523133 TOP2BQ02880 1626 aa8.03□□□□□ -1.12
MSC-AS1-209ENST00000523133 FOXK1P85037 733 aa8.01□□□□□ -1.13
MSC-AS1-209ENST00000523133 DSG2Q14126 1118 aa8.01□□□□□ -1.13
MSC-AS1-209ENST00000523133 RNF166Q96A37 237 aaPredicted RBP8.01□□□□□ -1.13
MSC-AS1-209ENST00000523133 GPHNQ9NQX3 736 aaPredicted RBP8.01□□□□□ -1.13
MSC-AS1-209ENST00000523133 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
MSC-AS1-209ENST00000523133 URB2Q14146 1524 aaKnown RBP8□□□□□ -1.13
MSC-AS1-209ENST00000523133 PLPP6Q8IY26 295 aa8□□□□□ -1.13
MSC-AS1-209ENST00000523133 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
MSC-AS1-209ENST00000523133 PCF11O94913 1555 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms