RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
HMGB4-204ENST00000522796 PRDM16Q9HAZ2 1276 aa10.86□□□□□ -0.67
HMGB4-204ENST00000522796 ZNF622Q969S3 477 aaKnown RBP eCLIP10.86□□□□□ -0.67
HMGB4-204ENST00000522796 WRNQ14191 1432 aaPredicted RBP eCLIP10.85□□□□□ -0.67
HMGB4-204ENST00000522796 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
HMGB4-204ENST00000522796 HDAC5Q9UQL6 1122 aa10.85□□□□□ -0.67
HMGB4-204ENST00000522796 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
HMGB4-204ENST00000522796 VGLL3A8MV65 326 aa10.84□□□□□ -0.67
HMGB4-204ENST00000522796 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
HMGB4-204ENST00000522796 SLC52A1Q9NWF4 448 aa10.82□□□□□ -0.68
HMGB4-204ENST00000522796 ZHX1Q9UKY1 873 aaPredicted RBP10.82□□□□□ -0.68
HMGB4-204ENST00000522796 PHF14O94880 888 aa10.81□□□□□ -0.68
HMGB4-204ENST00000522796 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
HMGB4-204ENST00000522796 SETQ01105 290 aaPredicted RBP10.81□□□□□ -0.68
HMGB4-204ENST00000522796 DMTNQ08495 405 aa10.8□□□□□ -0.68
HMGB4-204ENST00000522796 L1TD1Q5T7N2 865 aaKnown RBP10.8□□□□□ -0.68
HMGB4-204ENST00000522796 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
HMGB4-204ENST00000522796 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
HMGB4-204ENST00000522796 ZNF526Q8TF50 670 aaPredicted RBP10.8□□□□□ -0.68
HMGB4-204ENST00000522796 AXDND1Q5T1B0 1012 aaPredicted RBP10.79□□□□□ -0.68
HMGB4-204ENST00000522796 OS9Q13438 667 aaPredicted RBP10.79□□□□□ -0.68
HMGB4-204ENST00000522796 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
HMGB4-204ENST00000522796 CWC22Q9HCG8 908 aaKnown RBP10.78□□□□□ -0.68
HMGB4-204ENST00000522796 APPP05067 770 aa10.78□□□□□ -0.68
HMGB4-204ENST00000522796 KIF20AO95235 890 aa10.77□□□□□ -0.69
HMGB4-204ENST00000522796 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
HMGB4-204ENST00000522796 SOX12O15370 315 aa10.76□□□□□ -0.69
HMGB4-204ENST00000522796 TNNT2P45379 298 aaPredicted RBP10.76□□□□□ -0.69
HMGB4-204ENST00000522796 PSEN1P49768 467 aa10.76□□□□□ -0.69
HMGB4-204ENST00000522796 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
HMGB4-204ENST00000522796 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
HMGB4-204ENST00000522796 NACADO15069 1562 aa10.76□□□□□ -0.69
HMGB4-204ENST00000522796 TAF3Q5VWG9 929 aa10.76□□□□□ -0.69
HMGB4-204ENST00000522796 DNAJC2Q99543 621 aaKnown RBP10.76□□□□□ -0.69
HMGB4-204ENST00000522796 ANAPC15P60006 121 aa10.75□□□□□ -0.69
HMGB4-204ENST00000522796 MAPK8IP2Q13387 824 aaPredicted RBP10.75□□□□□ -0.69
HMGB4-204ENST00000522796 MTERF4Q7Z6M4 381 aaKnown RBP10.74□□□□□ -0.69
HMGB4-204ENST00000522796 ABCC9O60706 1549 aa10.73□□□□□ -0.69
HMGB4-204ENST00000522796 GPATCH11Q8N954 259 aa10.73□□□□□ -0.69
HMGB4-204ENST00000522796 KDM2AQ9Y2K7 1162 aa10.73□□□□□ -0.69
HMGB4-204ENST00000522796 TERF1P54274 439 aa10.71□□□□□ -0.7
HMGB4-204ENST00000522796 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
HMGB4-204ENST00000522796 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
HMGB4-204ENST00000522796 GTPBP4Q9BZE4 634 aaKnown RBP10.69□□□□□ -0.7
HMGB4-204ENST00000522796 MAFGO15525 162 aa10.68□□□□□ -0.7
HMGB4-204ENST00000522796 SLC20A2Q08357 652 aa10.68□□□□□ -0.7
HMGB4-204ENST00000522796 ZSCAN20P17040 1043 aaPredicted RBP10.67□□□□□ -0.7
HMGB4-204ENST00000522796 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
HMGB4-204ENST00000522796 CC2D1BQ5T0F9 858 aaKnown RBP10.65□□□□□ -0.7
HMGB4-204ENST00000522796 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
HMGB4-204ENST00000522796 ESPNB1AK53 854 aa10.64□□□□□ -0.71
HMGB4-204ENST00000522796 ANP32CO43423 234 aa10.64□□□□□ -0.71
HMGB4-204ENST00000522796 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
HMGB4-204ENST00000522796 KIAA1211Q6ZU35 1233 aa10.63□□□□□ -0.71
HMGB4-204ENST00000522796 EGFL6Q8IUX8 553 aa10.63□□□□□ -0.71
HMGB4-204ENST00000522796 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
HMGB4-204ENST00000522796 FRAT2O75474 233 aaPredicted RBP10.63□□□□□ -0.71
HMGB4-204ENST00000522796 RIPK4P57078 832 aa10.63□□□□□ -0.71
HMGB4-204ENST00000522796 GOLGA6L3A6NEY3 463 aa10.62□□□□□ -0.71
HMGB4-204ENST00000522796 PPP1R15AO75807 674 aaPredicted RBP10.62□□□□□ -0.71
HMGB4-204ENST00000522796 SH3BP1Q9Y3L3 701 aa10.62□□□□□ -0.71
HMGB4-204ENST00000522796 E9PSI1 815 aa10.62□□□□□ -0.71
HMGB4-204ENST00000522796 HNRNPUQ00839 825 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGB4-204ENST00000522796 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
HMGB4-204ENST00000522796 FBLN2P98095 1184 aa10.61□□□□□ -0.71
HMGB4-204ENST00000522796 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
HMGB4-204ENST00000522796 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
HMGB4-204ENST00000522796 CEP120Q8N960 986 aa10.61□□□□□ -0.71
HMGB4-204ENST00000522796 BACH2Q9BYV9 841 aa10.61□□□□□ -0.71
HMGB4-204ENST00000522796 DHX57Q6P158 1386 aaKnown RBP10.61□□□□□ -0.71
HMGB4-204ENST00000522796 MS4A1P11836 297 aa10.6□□□□□ -0.71
HMGB4-204ENST00000522796 PDE4AP27815 886 aa10.6□□□□□ -0.71
HMGB4-204ENST00000522796 DDX10Q13206 875 aaKnown RBP10.6□□□□□ -0.71
HMGB4-204ENST00000522796 PEG3Q9GZU2 1588 aa10.59□□□□□ -0.71
HMGB4-204ENST00000522796 XRCC6P12956 609 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGB4-204ENST00000522796 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
HMGB4-204ENST00000522796 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
HMGB4-204ENST00000522796 NECTIN2Q92692 538 aa10.59□□□□□ -0.71
HMGB4-204ENST00000522796 YY1AP1Q9H869 796 aa10.59□□□□□ -0.71
HMGB4-204ENST00000522796 RALBP1Q15311 655 aa10.58□□□□□ -0.72
HMGB4-204ENST00000522796 CCDC94Q9BW85 323 aaPredicted RBP10.58□□□□□ -0.72
HMGB4-204ENST00000522796 FAM13BQ9NYF5 915 aa10.58□□□□□ -0.72
HMGB4-204ENST00000522796 FSD2A1L4K1 749 aa10.58□□□□□ -0.72
HMGB4-204ENST00000522796 PLEKHD1A6NEE1 506 aa10.57□□□□□ -0.72
HMGB4-204ENST00000522796 HNRNPUL2Q1KMD3 747 aaKnown RBP10.57□□□□□ -0.72
HMGB4-204ENST00000522796 POGKQ9P215 609 aa10.57□□□□□ -0.72
HMGB4-204ENST00000522796 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
HMGB4-204ENST00000522796 GEMIN8Q9NWZ8 242 aaKnown RBP10.56□□□□□ -0.72
HMGB4-204ENST00000522796 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
HMGB4-204ENST00000522796 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
HMGB4-204ENST00000522796 NBPF1Q3BBV0 1214 aa10.55□□□□□ -0.72
HMGB4-204ENST00000522796 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.55□□□□□ -0.72
HMGB4-204ENST00000522796 P3H3Q8IVL6 736 aa10.55□□□□□ -0.72
HMGB4-204ENST00000522796 OFD1O75665 1012 aa10.55□□□□□ -0.72
HMGB4-204ENST00000522796 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
HMGB4-204ENST00000522796 IRF6O14896 467 aa10.54□□□□□ -0.72
HMGB4-204ENST00000522796 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
HMGB4-204ENST00000522796 FAM9BQ8IZU0 186 aa10.54□□□□□ -0.72
HMGB4-204ENST00000522796 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
HMGB4-204ENST00000522796 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms