RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
CTNNA1-236ENST00000522792 RAB3GAP2Q9H2M9 1393 aa23.04■■□□□ 1.28
CTNNA1-236ENST00000522792 PREX2Q70Z35 1606 aa23.03■■□□□ 1.28
CTNNA1-236ENST00000522792 WDR7Q9Y4E6 1490 aa23.03■■□□□ 1.28
CTNNA1-236ENST00000522792 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
CTNNA1-236ENST00000522792 NPM1P06748 294 aaKnown RBP eCLIP23.01■■□□□ 1.27
CTNNA1-236ENST00000522792 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
CTNNA1-236ENST00000522792 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
CTNNA1-236ENST00000522792 DAPK1P53355 1430 aa23.01■■□□□ 1.27
CTNNA1-236ENST00000522792 ZEB1P37275 1124 aaPredicted RBP23■■□□□ 1.27
CTNNA1-236ENST00000522792 ASXL2Q76L83 1435 aa23■■□□□ 1.27
CTNNA1-236ENST00000522792 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
CTNNA1-236ENST00000522792 ABCC5O15440 1437 aa22.99■■□□□ 1.27
CTNNA1-236ENST00000522792 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
CTNNA1-236ENST00000522792 ARHGAP5Q13017 1502 aa22.97■■□□□ 1.27
CTNNA1-236ENST00000522792 HFM1A2PYH4 1435 aa22.96■■□□□ 1.27
CTNNA1-236ENST00000522792 SAMD9LQ8IVG5 1584 aa22.95■■□□□ 1.26
CTNNA1-236ENST00000522792 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
CTNNA1-236ENST00000522792 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
CTNNA1-236ENST00000522792 NAIPQ13075 1403 aa22.93■■□□□ 1.26
CTNNA1-236ENST00000522792 PLCH2O75038 1416 aa22.91■■□□□ 1.26
CTNNA1-236ENST00000522792 CROCC2H7BZ55 1655 aa22.9■■□□□ 1.26
CTNNA1-236ENST00000522792 GCC2Q8IWJ2 1684 aa22.89■■□□□ 1.25
CTNNA1-236ENST00000522792 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.25
CTNNA1-236ENST00000522792 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
CTNNA1-236ENST00000522792 ABCA9Q8IUA7 1624 aa22.87■■□□□ 1.25
CTNNA1-236ENST00000522792 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
CTNNA1-236ENST00000522792 SYCP2Q9BX26 1530 aa22.86■■□□□ 1.25
CTNNA1-236ENST00000522792 MBD5Q9P267 1494 aa22.85■■□□□ 1.25
CTNNA1-236ENST00000522792 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
CTNNA1-236ENST00000522792 ARHGEF5Q12774 1597 aa22.84■■□□□ 1.25
CTNNA1-236ENST00000522792 EFCAB2Q5VUJ9 269 aa22.83■■□□□ 1.25
CTNNA1-236ENST00000522792 KDM6BO15054 1643 aa22.83■■□□□ 1.25
CTNNA1-236ENST00000522792 CCDC141Q6ZP82 1450 aa22.81■■□□□ 1.24
CTNNA1-236ENST00000522792 C9orf84Q5VXU9 1444 aa22.8■■□□□ 1.24
CTNNA1-236ENST00000522792 SHANK2Q9UPX8 1470 aa22.8■■□□□ 1.24
CTNNA1-236ENST00000522792 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
CTNNA1-236ENST00000522792 ARAP3Q8WWN8 1544 aa22.8■■□□□ 1.24
CTNNA1-236ENST00000522792 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
CTNNA1-236ENST00000522792 MAPKBP1O60336 1514 aa22.79■■□□□ 1.24
CTNNA1-236ENST00000522792 NCOA1Q15788 1441 aa22.79■■□□□ 1.24
CTNNA1-236ENST00000522792 ARHGEF12Q9NZN5 1544 aa22.78■■□□□ 1.24
CTNNA1-236ENST00000522792 TSPY4P0CV99 314 aa22.78■■□□□ 1.24
CTNNA1-236ENST00000522792 TSPY10P0CW01 314 aa22.78■■□□□ 1.24
CTNNA1-236ENST00000522792 ABCC1P33527 1531 aa22.77■■□□□ 1.24
CTNNA1-236ENST00000522792 KIAA1107Q9UPP5 1409 aa22.77■■□□□ 1.24
CTNNA1-236ENST00000522792 ANKRD30AQ9BXX3 1397 aa22.77■■□□□ 1.24
CTNNA1-236ENST00000522792 FANCAO15360 1455 aa22.76■■□□□ 1.23
CTNNA1-236ENST00000522792 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
CTNNA1-236ENST00000522792 RSPH4AQ5TD94 716 aa22.74■■□□□ 1.23
CTNNA1-236ENST00000522792 CD109Q6YHK3 1445 aa22.71■■□□□ 1.23
CTNNA1-236ENST00000522792 TRIM52Q96A61 297 aa22.7■■□□□ 1.23
CTNNA1-236ENST00000522792 TRAPPC8Q9Y2L5 1435 aa22.7■■□□□ 1.22
CTNNA1-236ENST00000522792 MAST1Q9Y2H9 1570 aa22.69■■□□□ 1.22
CTNNA1-236ENST00000522792 KIF15Q9NS87 1388 aa22.67■■□□□ 1.22
CTNNA1-236ENST00000522792 ADGRL1O94910 1474 aa22.66■■□□□ 1.22
CTNNA1-236ENST00000522792 ANKRD50Q9ULJ7 1429 aa22.65■■□□□ 1.22
CTNNA1-236ENST00000522792 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
CTNNA1-236ENST00000522792 AFAP1Q8N556 730 aa22.63■■□□□ 1.21
CTNNA1-236ENST00000522792 CFAP74Q9C0B2 1584 aa22.62■■□□□ 1.21
CTNNA1-236ENST00000522792 MAP3K4Q9Y6R4 1608 aa22.61■■□□□ 1.21
CTNNA1-236ENST00000522792 PLXNC1O60486 1568 aa22.61■■□□□ 1.21
CTNNA1-236ENST00000522792 GLI2P10070 1586 aa22.61■■□□□ 1.21
CTNNA1-236ENST00000522792 DIP2BQ9P265 1576 aa22.61■■□□□ 1.21
CTNNA1-236ENST00000522792 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
CTNNA1-236ENST00000522792 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
CTNNA1-236ENST00000522792 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.21
CTNNA1-236ENST00000522792 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.2
CTNNA1-236ENST00000522792 MPHOSPH9Q99550 1183 aa22.58■■□□□ 1.2
CTNNA1-236ENST00000522792 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
CTNNA1-236ENST00000522792 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
CTNNA1-236ENST00000522792 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
CTNNA1-236ENST00000522792 RTEL1-TNFRSF6BF6WH68 1400 aa22.53■■□□□ 1.2
CTNNA1-236ENST00000522792 PZPP20742 1482 aa22.53■■□□□ 1.2
CTNNA1-236ENST00000522792 NEO1Q92859 1461 aa22.53■■□□□ 1.2
CTNNA1-236ENST00000522792 INO80Q9ULG1 1556 aaPredicted RBP22.52■■□□□ 1.2
CTNNA1-236ENST00000522792 MYT1LQ9UL68 1186 aa22.52■■□□□ 1.2
CTNNA1-236ENST00000522792 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
CTNNA1-236ENST00000522792 DUOX2Q9NRD8 1548 aa22.52■■□□□ 1.2
CTNNA1-236ENST00000522792 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.19
CTNNA1-236ENST00000522792 FOXD1Q16676 465 aa22.51■■□□□ 1.19
CTNNA1-236ENST00000522792 ZNF518AQ6AHZ1 1483 aa22.51■■□□□ 1.19
CTNNA1-236ENST00000522792 POGZQ7Z3K3 1410 aa22.49■■□□□ 1.19
CTNNA1-236ENST00000522792 NUP155O75694 1391 aa22.49■■□□□ 1.19
CTNNA1-236ENST00000522792 TSPOAP1O95153 1857 aa22.48■■□□□ 1.19
CTNNA1-236ENST00000522792 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
CTNNA1-236ENST00000522792 KDM5DQ9BY66 1539 aa22.45■■□□□ 1.18
CTNNA1-236ENST00000522792 KDM5CP41229 1560 aa22.45■■□□□ 1.18
CTNNA1-236ENST00000522792 KIDINS220Q9ULH0 1771 aa22.45■■□□□ 1.18
CTNNA1-236ENST00000522792 KIF13AQ9H1H9 1805 aa22.44■■□□□ 1.18
CTNNA1-236ENST00000522792 PPRC1Q5VV67 1664 aaKnown RBP22.44■■□□□ 1.18
CTNNA1-236ENST00000522792 UNC13BO14795 1591 aa22.44■■□□□ 1.18
CTNNA1-236ENST00000522792 RAPGEF3O95398 923 aa22.43■■□□□ 1.18
CTNNA1-236ENST00000522792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.18
CTNNA1-236ENST00000522792 PKD2Q13563 968 aa22.41■■□□□ 1.18
CTNNA1-236ENST00000522792 HECW2Q9P2P5 1572 aa22.4■■□□□ 1.18
CTNNA1-236ENST00000522792 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
CTNNA1-236ENST00000522792 FAM135AQ9P2D6 1515 aa22.39■■□□□ 1.17
CTNNA1-236ENST00000522792 RICTORQ6R327 1708 aa22.38■■□□□ 1.17
CTNNA1-236ENST00000522792 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms