RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 GOLGA6L3A6NEY3 463 aa13.75□□□□□ -0.21
MEG3-220ENST00000522771 TIMELESSQ9UNS1 1208 aa13.74□□□□□ -0.21
MEG3-220ENST00000522771 KIAA2012Q0VF49 1180 aa13.74□□□□□ -0.21
MEG3-220ENST00000522771 KTN1Q86UP2 1357 aaKnown RBP13.73□□□□□ -0.21
MEG3-220ENST00000522771 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
MEG3-220ENST00000522771 APBB1O00213 710 aa13.72□□□□□ -0.21
MEG3-220ENST00000522771 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
MEG3-220ENST00000522771 MORC1Q86VD1 984 aa13.71□□□□□ -0.21
MEG3-220ENST00000522771 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
MEG3-220ENST00000522771 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
MEG3-220ENST00000522771 FOXD1Q16676 465 aa13.69□□□□□ -0.22
MEG3-220ENST00000522771 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
MEG3-220ENST00000522771 RWDD1Q9H446 243 aaPredicted RBP13.68□□□□□ -0.22
MEG3-220ENST00000522771 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
MEG3-220ENST00000522771 SOGA1O94964 1423 aa13.66□□□□□ -0.22
MEG3-220ENST00000522771 BAZ1BQ9UIG0 1483 aaKnown RBP13.66□□□□□ -0.22
MEG3-220ENST00000522771 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
MEG3-220ENST00000522771 IPO8O15397 1037 aaKnown RBP13.66□□□□□ -0.22
MEG3-220ENST00000522771 LMOD2Q6P5Q4 547 aa13.66□□□□□ -0.22
MEG3-220ENST00000522771 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
MEG3-220ENST00000522771 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
MEG3-220ENST00000522771 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
MEG3-220ENST00000522771 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
MEG3-220ENST00000522771 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
MEG3-220ENST00000522771 SRPK2P78362 688 aaKnown RBP13.64□□□□□ -0.23
MEG3-220ENST00000522771 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
MEG3-220ENST00000522771 RALBP1Q15311 655 aa13.64□□□□□ -0.23
MEG3-220ENST00000522771 SOX12O15370 315 aa13.64□□□□□ -0.23
MEG3-220ENST00000522771 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
MEG3-220ENST00000522771 TNNT3P45378 269 aaPredicted RBP13.63□□□□□ -0.23
MEG3-220ENST00000522771 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
MEG3-220ENST00000522771 EIF4G1Q04637 1599 aaKnown RBP13.63□□□□□ -0.23
MEG3-220ENST00000522771 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
MEG3-220ENST00000522771 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
MEG3-220ENST00000522771 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
MEG3-220ENST00000522771 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
MEG3-220ENST00000522771 VPS8Q8N3P4 1428 aa13.62□□□□□ -0.23
MEG3-220ENST00000522771 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
MEG3-220ENST00000522771 NPHP1O15259 732 aa13.6□□□□□ -0.23
MEG3-220ENST00000522771 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
MEG3-220ENST00000522771 PKD2Q13563 968 aa13.59□□□□□ -0.23
MEG3-220ENST00000522771 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
MEG3-220ENST00000522771 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.23
MEG3-220ENST00000522771 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.23
MEG3-220ENST00000522771 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
MEG3-220ENST00000522771 KANK1Q14678 1352 aa13.58□□□□□ -0.24
MEG3-220ENST00000522771 CCDC146Q8IYE0 955 aa13.58□□□□□ -0.24
MEG3-220ENST00000522771 GSE1Q14687 1217 aa13.57□□□□□ -0.24
MEG3-220ENST00000522771 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
MEG3-220ENST00000522771 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
MEG3-220ENST00000522771 MPHOSPH9Q99550 1183 aa13.57□□□□□ -0.24
MEG3-220ENST00000522771 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
MEG3-220ENST00000522771 CLSTN1O94985 981 aa13.56□□□□□ -0.24
MEG3-220ENST00000522771 TPM4P67936 248 aa13.56□□□□□ -0.24
MEG3-220ENST00000522771 FOXD4L5Q5VV16 416 aaPredicted RBP13.55□□□□□ -0.24
MEG3-220ENST00000522771 FOXD4L4Q8WXT5 416 aaPredicted RBP13.55□□□□□ -0.24
MEG3-220ENST00000522771 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
MEG3-220ENST00000522771 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
MEG3-220ENST00000522771 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
MEG3-220ENST00000522771 DDX11L8A8MPP1 907 aa13.55□□□□□ -0.24
MEG3-220ENST00000522771 HSP90B1P14625 803 aaKnown RBP13.55□□□□□ -0.24
MEG3-220ENST00000522771 PDE4AP27815 886 aa13.55□□□□□ -0.24
MEG3-220ENST00000522771 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
MEG3-220ENST00000522771 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
MEG3-220ENST00000522771 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
MEG3-220ENST00000522771 STK26Q9P289 416 aa13.54□□□□□ -0.24
MEG3-220ENST00000522771 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
MEG3-220ENST00000522771 PHF14O94880 888 aa13.53□□□□□ -0.24
MEG3-220ENST00000522771 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
MEG3-220ENST00000522771 GOLGA6L1Q8N7Z2 621 aa13.53□□□□□ -0.24
MEG3-220ENST00000522771 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.24
MEG3-220ENST00000522771 CUX2O14529 1486 aa13.52□□□□□ -0.25
MEG3-220ENST00000522771 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
MEG3-220ENST00000522771 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
MEG3-220ENST00000522771 FANCIQ9NVI1 1328 aa13.5□□□□□ -0.25
MEG3-220ENST00000522771 PLIN1O60240 522 aa13.5□□□□□ -0.25
MEG3-220ENST00000522771 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
MEG3-220ENST00000522771 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
MEG3-220ENST00000522771 ST18O60284 1047 aa13.49□□□□□ -0.25
MEG3-220ENST00000522771 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
MEG3-220ENST00000522771 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
MEG3-220ENST00000522771 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
MEG3-220ENST00000522771 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
MEG3-220ENST00000522771 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
MEG3-220ENST00000522771 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
MEG3-220ENST00000522771 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
MEG3-220ENST00000522771 DDX49Q9Y6V7 483 aaKnown RBP13.47□□□□□ -0.25
MEG3-220ENST00000522771 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
MEG3-220ENST00000522771 SLC4A10Q6U841 1118 aa13.46□□□□□ -0.25
MEG3-220ENST00000522771 KIF15Q9NS87 1388 aa13.46□□□□□ -0.25
MEG3-220ENST00000522771 NUP155O75694 1391 aa13.46□□□□□ -0.26
MEG3-220ENST00000522771 HMMRO75330 724 aa13.46□□□□□ -0.26
MEG3-220ENST00000522771 CREBRFQ8IUR6 639 aa13.45□□□□□ -0.26
MEG3-220ENST00000522771 FMN1Q68DA7 1419 aa13.45□□□□□ -0.26
MEG3-220ENST00000522771 NACADO15069 1562 aa13.45□□□□□ -0.26
MEG3-220ENST00000522771 SKOR2Q2VWA4 1001 aaPredicted RBP13.44□□□□□ -0.26
MEG3-220ENST00000522771 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
MEG3-220ENST00000522771 FOXD4L6Q3SYB3 417 aaPredicted RBP13.44□□□□□ -0.26
MEG3-220ENST00000522771 FOXD4L3Q6VB84 417 aaPredicted RBP13.44□□□□□ -0.26
MEG3-220ENST00000522771 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms