RNA–Protein interactions for RNA: ENST00000522590.1

IPCEF1-213, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 2

Gene IPCEF1, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-213ENST00000522590 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
IPCEF1-213ENST00000522590 MSH5O43196 834 aa11.69□□□□□ -0.54
IPCEF1-213ENST00000522590 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
IPCEF1-213ENST00000522590 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
IPCEF1-213ENST00000522590 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
IPCEF1-213ENST00000522590 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
IPCEF1-213ENST00000522590 ASXL2Q76L83 1435 aa11.68□□□□□ -0.54
IPCEF1-213ENST00000522590 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
IPCEF1-213ENST00000522590 PTPRGP23470 1445 aa11.67□□□□□ -0.54
IPCEF1-213ENST00000522590 COL17A1Q9UMD9 1497 aaPredicted RBP11.67□□□□□ -0.54
IPCEF1-213ENST00000522590 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
IPCEF1-213ENST00000522590 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
IPCEF1-213ENST00000522590 UHRF1BP1LA0JNW5 1464 aa11.63□□□□□ -0.55
IPCEF1-213ENST00000522590 MAP3K4Q9Y6R4 1608 aa11.62□□□□□ -0.55
IPCEF1-213ENST00000522590 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
IPCEF1-213ENST00000522590 EPRSP07814 1512 aaKnown RBP11.61□□□□□ -0.55
IPCEF1-213ENST00000522590 CARMIL2Q6F5E8 1435 aa11.61□□□□□ -0.55
IPCEF1-213ENST00000522590 SOCS7O14512 581 aa11.59□□□□□ -0.55
IPCEF1-213ENST00000522590 CUL7Q14999 1698 aa11.58□□□□□ -0.56
IPCEF1-213ENST00000522590 UACAQ9BZF9 1416 aa11.57□□□□□ -0.56
IPCEF1-213ENST00000522590 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
IPCEF1-213ENST00000522590 KDM5BQ9UGL1 1544 aa11.56□□□□□ -0.56
IPCEF1-213ENST00000522590 YTHDC1Q96MU7 727 aaKnown RBP11.54□□□□□ -0.56
IPCEF1-213ENST00000522590 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
IPCEF1-213ENST00000522590 IGF1RP08069 1367 aa11.51□□□□□ -0.57
IPCEF1-213ENST00000522590 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
IPCEF1-213ENST00000522590 PTPRMP28827 1452 aa11.51□□□□□ -0.57
IPCEF1-213ENST00000522590 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
IPCEF1-213ENST00000522590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
IPCEF1-213ENST00000522590 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
IPCEF1-213ENST00000522590 WDR7Q9Y4E6 1490 aa11.5□□□□□ -0.57
IPCEF1-213ENST00000522590 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
IPCEF1-213ENST00000522590 KIF21BO75037 1637 aa11.49□□□□□ -0.57
IPCEF1-213ENST00000522590 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
IPCEF1-213ENST00000522590 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
IPCEF1-213ENST00000522590 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
IPCEF1-213ENST00000522590 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
IPCEF1-213ENST00000522590 CD109Q6YHK3 1445 aa11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 ILDR2Q71H61 639 aa11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 CCER1Q8TC90 406 aaPredicted RBP11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 IQGAP2Q13576 1575 aa11.48□□□□□ -0.57
IPCEF1-213ENST00000522590 IRX6P78412 446 aaPredicted RBP11.47□□□□□ -0.57
IPCEF1-213ENST00000522590 CFAP43Q8NDM7 1665 aa11.47□□□□□ -0.57
IPCEF1-213ENST00000522590 ADAMTSL3P82987 1691 aa11.47□□□□□ -0.57
IPCEF1-213ENST00000522590 CERKQ8TCT0 537 aa11.46□□□□□ -0.57
IPCEF1-213ENST00000522590 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
IPCEF1-213ENST00000522590 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
IPCEF1-213ENST00000522590 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
IPCEF1-213ENST00000522590 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
IPCEF1-213ENST00000522590 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
IPCEF1-213ENST00000522590 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
IPCEF1-213ENST00000522590 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
IPCEF1-213ENST00000522590 POLR3GLQ9BT43 218 aa11.41□□□□□ -0.58
IPCEF1-213ENST00000522590 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
IPCEF1-213ENST00000522590 UGGT2Q9NYU1 1516 aa11.4□□□□□ -0.58
IPCEF1-213ENST00000522590 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.58
IPCEF1-213ENST00000522590 SECISBP2LQ93073 1101 aaKnown RBP11.39□□□□□ -0.59
IPCEF1-213ENST00000522590 NCLP19338 710 aaKnown RBP11.39□□□□□ -0.59
IPCEF1-213ENST00000522590 HSP90AA2PQ14568 343 aaPredicted RBP11.39□□□□□ -0.59
IPCEF1-213ENST00000522590 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
IPCEF1-213ENST00000522590 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
IPCEF1-213ENST00000522590 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
IPCEF1-213ENST00000522590 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
IPCEF1-213ENST00000522590 KIAA0556O60303 1618 aa11.37□□□□□ -0.59
IPCEF1-213ENST00000522590 MADDQ8WXG6 1647 aa11.37□□□□□ -0.59
IPCEF1-213ENST00000522590 CHIC1Q5VXU3 224 aa11.37□□□□□ -0.59
IPCEF1-213ENST00000522590 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
IPCEF1-213ENST00000522590 CNGB1Q14028 1251 aaPredicted RBP11.36□□□□□ -0.59
IPCEF1-213ENST00000522590 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
IPCEF1-213ENST00000522590 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
IPCEF1-213ENST00000522590 PRDM4Q9UKN5 801 aa11.35□□□□□ -0.59
IPCEF1-213ENST00000522590 CALD1Q05682 793 aaKnown RBP11.34□□□□□ -0.59
IPCEF1-213ENST00000522590 HSPA2P54652 639 aa11.33□□□□□ -0.59
IPCEF1-213ENST00000522590 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.59
IPCEF1-213ENST00000522590 IGSF3O75054 1194 aa11.33□□□□□ -0.6
IPCEF1-213ENST00000522590 CNPY4Q8N129 248 aa11.33□□□□□ -0.6
IPCEF1-213ENST00000522590 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
IPCEF1-213ENST00000522590 NEO1Q92859 1461 aa11.31□□□□□ -0.6
IPCEF1-213ENST00000522590 RIMS1Q86UR5 1692 aaKnown RBP11.31□□□□□ -0.6
IPCEF1-213ENST00000522590 SUPT5HO00267 1087 aaKnown RBP11.31□□□□□ -0.6
IPCEF1-213ENST00000522590 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
IPCEF1-213ENST00000522590 ABCA8O94911 1581 aa11.3□□□□□ -0.6
IPCEF1-213ENST00000522590 POGZQ7Z3K3 1410 aa11.3□□□□□ -0.6
IPCEF1-213ENST00000522590 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.3□□□□□ -0.6
IPCEF1-213ENST00000522590 DMRT2Q9Y5R5 561 aa11.3□□□□□ -0.6
IPCEF1-213ENST00000522590 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
IPCEF1-213ENST00000522590 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
IPCEF1-213ENST00000522590 RAPGEF3O95398 923 aa11.29□□□□□ -0.6
IPCEF1-213ENST00000522590 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
IPCEF1-213ENST00000522590 FAM43AQ8N2R8 423 aa11.28□□□□□ -0.6
IPCEF1-213ENST00000522590 ABCA9Q8IUA7 1624 aa11.28□□□□□ -0.6
IPCEF1-213ENST00000522590 ARHGEF40Q8TER5 1519 aa11.27□□□□□ -0.6
IPCEF1-213ENST00000522590 NBR1Q14596 966 aa11.27□□□□□ -0.61
IPCEF1-213ENST00000522590 MIER1Q8N108 512 aa11.26□□□□□ -0.61
IPCEF1-213ENST00000522590 FANCAO15360 1455 aa11.26□□□□□ -0.61
IPCEF1-213ENST00000522590 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
IPCEF1-213ENST00000522590 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms