RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
LAMA4-219ENST00000522006 GBP4Q96PP9 640 aa14.45□□□□□ -0.1
LAMA4-219ENST00000522006 HSPA5P11021 654 aaKnown RBP14.44□□□□□ -0.1
LAMA4-219ENST00000522006 GZF1Q9H116 711 aaPredicted RBP14.43□□□□□ -0.1
LAMA4-219ENST00000522006 KANK1Q14678 1352 aa14.43□□□□□ -0.1
LAMA4-219ENST00000522006 KTN1Q86UP2 1357 aaKnown RBP14.43□□□□□ -0.1
LAMA4-219ENST00000522006 ARID3AQ99856 593 aa14.42□□□□□ -0.1
LAMA4-219ENST00000522006 RTF1Q92541 710 aaKnown RBP14.42□□□□□ -0.1
LAMA4-219ENST00000522006 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
LAMA4-219ENST00000522006 KIAA2012Q0VF49 1180 aa14.41□□□□□ -0.1
LAMA4-219ENST00000522006 KIAA1211Q6ZU35 1233 aa14.41□□□□□ -0.1
LAMA4-219ENST00000522006 SAFB2Q14151 953 aaKnown RBP eCLIP14.4□□□□□ -0.1
LAMA4-219ENST00000522006 SLKQ9H2G2 1235 aaPredicted RBP14.4□□□□□ -0.1
LAMA4-219ENST00000522006 ISY1Q9ULR0 285 aaKnown RBP14.4□□□□□ -0.1
LAMA4-219ENST00000522006 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
LAMA4-219ENST00000522006 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
LAMA4-219ENST00000522006 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.11
LAMA4-219ENST00000522006 ITPRIPQ8IWB1 547 aa14.4□□□□□ -0.11
LAMA4-219ENST00000522006 RCAN3Q9UKA8 241 aa14.39□□□□□ -0.11
LAMA4-219ENST00000522006 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
LAMA4-219ENST00000522006 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
LAMA4-219ENST00000522006 SETD5Q9C0A6 1442 aa14.37□□□□□ -0.11
LAMA4-219ENST00000522006 TIMELESSQ9UNS1 1208 aa14.36□□□□□ -0.11
LAMA4-219ENST00000522006 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
LAMA4-219ENST00000522006 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
LAMA4-219ENST00000522006 SYAP1Q96A49 352 aaPredicted RBP14.35□□□□□ -0.11
LAMA4-219ENST00000522006 GOLGA6L3A6NEY3 463 aa14.34□□□□□ -0.11
LAMA4-219ENST00000522006 MFAP1P55081 439 aaKnown RBP14.34□□□□□ -0.11
LAMA4-219ENST00000522006 NOC3LQ8WTT2 800 aaKnown RBP14.34□□□□□ -0.11
LAMA4-219ENST00000522006 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
LAMA4-219ENST00000522006 HDGFL2Q7Z4V5 671 aaPredicted RBP14.34□□□□□ -0.11
LAMA4-219ENST00000522006 ARHGAP35Q9NRY4 1499 aa14.33□□□□□ -0.11
LAMA4-219ENST00000522006 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
LAMA4-219ENST00000522006 PMFBP1Q8TBY8 1022 aa14.32□□□□□ -0.12
LAMA4-219ENST00000522006 NACADO15069 1562 aa14.32□□□□□ -0.12
LAMA4-219ENST00000522006 TPM4P67936 248 aa14.32□□□□□ -0.12
LAMA4-219ENST00000522006 STK26Q9P289 416 aa14.32□□□□□ -0.12
LAMA4-219ENST00000522006 ROCK2O75116 1388 aaKnown RBP14.32□□□□□ -0.12
LAMA4-219ENST00000522006 CALD1Q05682 793 aaKnown RBP14.32□□□□□ -0.12
LAMA4-219ENST00000522006 HSP90B1P14625 803 aaKnown RBP14.31□□□□□ -0.12
LAMA4-219ENST00000522006 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
LAMA4-219ENST00000522006 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.12
LAMA4-219ENST00000522006 FOXD1Q16676 465 aa14.31□□□□□ -0.12
LAMA4-219ENST00000522006 RALBP1Q15311 655 aa14.31□□□□□ -0.12
LAMA4-219ENST00000522006 MLECQ14165 292 aa14.3□□□□□ -0.12
LAMA4-219ENST00000522006 PKD2Q13563 968 aa14.3□□□□□ -0.12
LAMA4-219ENST00000522006 IPO9Q96P70 1041 aaKnown RBP14.29□□□□□ -0.12
LAMA4-219ENST00000522006 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
LAMA4-219ENST00000522006 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
LAMA4-219ENST00000522006 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.12
LAMA4-219ENST00000522006 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.12
LAMA4-219ENST00000522006 TNNT3P45378 269 aaPredicted RBP14.27□□□□□ -0.13
LAMA4-219ENST00000522006 GPATCH3Q96I76 525 aa14.26□□□□□ -0.13
LAMA4-219ENST00000522006 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
LAMA4-219ENST00000522006 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
LAMA4-219ENST00000522006 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
LAMA4-219ENST00000522006 CSPP1Q1MSJ5 1256 aa14.25□□□□□ -0.13
LAMA4-219ENST00000522006 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
LAMA4-219ENST00000522006 CARMIL1Q5VZK9 1371 aa14.25□□□□□ -0.13
LAMA4-219ENST00000522006 GOLGA6L1Q8N7Z2 621 aa14.24□□□□□ -0.13
LAMA4-219ENST00000522006 STK31Q9BXU1 1019 aa14.23□□□□□ -0.13
LAMA4-219ENST00000522006 CUX2O14529 1486 aa14.23□□□□□ -0.13
LAMA4-219ENST00000522006 GORABQ5T7V8 394 aa14.23□□□□□ -0.13
LAMA4-219ENST00000522006 CHMP3Q9Y3E7 222 aa14.23□□□□□ -0.13
LAMA4-219ENST00000522006 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
LAMA4-219ENST00000522006 GGT6Q6P531 493 aa14.22□□□□□ -0.13
LAMA4-219ENST00000522006 SPAG9O60271 1321 aaKnown RBP14.22□□□□□ -0.13
LAMA4-219ENST00000522006 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
LAMA4-219ENST00000522006 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
LAMA4-219ENST00000522006 SOGA1O94964 1423 aa14.22□□□□□ -0.13
LAMA4-219ENST00000522006 CSB-PGBD3P0DP91 1061 aa14.21□□□□□ -0.13
LAMA4-219ENST00000522006 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.13
LAMA4-219ENST00000522006 HMMRO75330 724 aa14.21□□□□□ -0.13
LAMA4-219ENST00000522006 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.14
LAMA4-219ENST00000522006 CREBRFQ8IUR6 639 aa14.2□□□□□ -0.14
LAMA4-219ENST00000522006 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
LAMA4-219ENST00000522006 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
LAMA4-219ENST00000522006 CLUAP1Q96AJ1 413 aa14.2□□□□□ -0.14
LAMA4-219ENST00000522006 PHF14O94880 888 aa14.2□□□□□ -0.14
LAMA4-219ENST00000522006 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
LAMA4-219ENST00000522006 PDE4CQ08493 712 aa14.19□□□□□ -0.14
LAMA4-219ENST00000522006 SLC4A10Q6U841 1118 aa14.19□□□□□ -0.14
LAMA4-219ENST00000522006 FOXD4L5Q5VV16 416 aaPredicted RBP14.19□□□□□ -0.14
LAMA4-219ENST00000522006 FOXD4L4Q8WXT5 416 aaPredicted RBP14.19□□□□□ -0.14
LAMA4-219ENST00000522006 RASSF8Q8NHQ8 419 aa14.19□□□□□ -0.14
LAMA4-219ENST00000522006 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
LAMA4-219ENST00000522006 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
LAMA4-219ENST00000522006 ST18O60284 1047 aa14.17□□□□□ -0.14
LAMA4-219ENST00000522006 NUP155O75694 1391 aa14.17□□□□□ -0.14
LAMA4-219ENST00000522006 DDX11L8A8MPP1 907 aa14.16□□□□□ -0.14
LAMA4-219ENST00000522006 KIF16BQ96L93 1317 aa14.16□□□□□ -0.14
LAMA4-219ENST00000522006 CHMP4AQ9BY43 222 aa14.15□□□□□ -0.14
LAMA4-219ENST00000522006 BAZ1AQ9NRL2 1556 aaPredicted RBP14.14□□□□□ -0.15
LAMA4-219ENST00000522006 TPM3P06753 285 aa14.14□□□□□ -0.15
LAMA4-219ENST00000522006 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
LAMA4-219ENST00000522006 PDE3BQ13370 1112 aa14.13□□□□□ -0.15
LAMA4-219ENST00000522006 PRM3Q9NNZ6 103 aa14.13□□□□□ -0.15
LAMA4-219ENST00000522006 ANKRD30AQ9BXX3 1397 aa14.13□□□□□ -0.15
LAMA4-219ENST00000522006 TMX4Q9H1E5 349 aaPredicted RBP14.13□□□□□ -0.15
LAMA4-219ENST00000522006 HSP90AA2PQ14568 343 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms