RNA–Protein interactions for RNA: ENST00000521922.5

UBR5-212, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBR5, Length 9,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-212ENST00000521922 STK11IPQ8N1F8 1099 aa18.41■□□□□ 0.54
UBR5-212ENST00000521922 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
UBR5-212ENST00000521922 NOM1Q5C9Z4 860 aaKnown RBP18.41■□□□□ 0.54
UBR5-212ENST00000521922 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
UBR5-212ENST00000521922 LMOD2Q6P5Q4 547 aa18.41■□□□□ 0.54
UBR5-212ENST00000521922 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
UBR5-212ENST00000521922 GOLGA6L3A6NEY3 463 aa18.4■□□□□ 0.54
UBR5-212ENST00000521922 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
UBR5-212ENST00000521922 NUDCQ9Y266 331 aa18.39■□□□□ 0.54
UBR5-212ENST00000521922 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
UBR5-212ENST00000521922 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
UBR5-212ENST00000521922 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
UBR5-212ENST00000521922 VPS53Q5VIR6 699 aa18.36■□□□□ 0.53
UBR5-212ENST00000521922 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
UBR5-212ENST00000521922 CCDC191Q8NCU4 936 aa18.35■□□□□ 0.53
UBR5-212ENST00000521922 TPM1P09493 284 aa18.35■□□□□ 0.53
UBR5-212ENST00000521922 VSIG10Q8N0Z9 540 aa18.34■□□□□ 0.53
UBR5-212ENST00000521922 HIRIP3Q9BW71 556 aaPredicted RBP18.34■□□□□ 0.53
UBR5-212ENST00000521922 TPM2P07951 284 aa18.34■□□□□ 0.53
UBR5-212ENST00000521922 TSPY4P0CV99 314 aa18.32■□□□□ 0.52
UBR5-212ENST00000521922 TSPY10P0CW01 314 aa18.32■□□□□ 0.52
UBR5-212ENST00000521922 MIER1Q8N108 512 aa18.32■□□□□ 0.52
UBR5-212ENST00000521922 CHIC2Q9UKJ5 165 aa18.32■□□□□ 0.52
UBR5-212ENST00000521922 MARCH6O60337 910 aa18.31■□□□□ 0.52
UBR5-212ENST00000521922 RUFY1Q96T51 708 aa18.29■□□□□ 0.52
UBR5-212ENST00000521922 GOLGA6L19H0YKK7 550 aa18.29■□□□□ 0.52
UBR5-212ENST00000521922 RDXP35241 583 aaKnown RBP18.29■□□□□ 0.52
UBR5-212ENST00000521922 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
UBR5-212ENST00000521922 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
UBR5-212ENST00000521922 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
UBR5-212ENST00000521922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.27■□□□□ 0.521e-6■■■■■ 64.1
UBR5-212ENST00000521922 CDR1P51861 262 aa18.27■□□□□ 0.52
UBR5-212ENST00000521922 AK7Q96M32 723 aa18.27■□□□□ 0.51
UBR5-212ENST00000521922 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
UBR5-212ENST00000521922 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
UBR5-212ENST00000521922 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
UBR5-212ENST00000521922 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
UBR5-212ENST00000521922 G3V3G9 751 aa18.24■□□□□ 0.51
UBR5-212ENST00000521922 DCAF8Q5TAQ9 597 aa18.24■□□□□ 0.51
UBR5-212ENST00000521922 IPO7O95373 1038 aaKnown RBP18.24■□□□□ 0.51
UBR5-212ENST00000521922 GORABQ5T7V8 394 aa18.23■□□□□ 0.51
UBR5-212ENST00000521922 SLKQ9H2G2 1235 aaPredicted RBP18.23■□□□□ 0.51
UBR5-212ENST00000521922 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
UBR5-212ENST00000521922 APBB1O00213 710 aa18.22■□□□□ 0.51
UBR5-212ENST00000521922 PLCD4Q9BRC7 762 aa18.22■□□□□ 0.51
UBR5-212ENST00000521922 ODF2Q5BJF6 829 aa18.21■□□□□ 0.51
UBR5-212ENST00000521922 KIF3AQ9Y496 699 aa18.2■□□□□ 0.5
UBR5-212ENST00000521922 H0YHG0 523 aa18.2■□□□□ 0.5
UBR5-212ENST00000521922 ZNF592Q92610 1267 aa18.2■□□□□ 0.5
UBR5-212ENST00000521922 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
UBR5-212ENST00000521922 ZRSR2Q15696 482 aaKnown RBP18.18■□□□□ 0.5
UBR5-212ENST00000521922 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
UBR5-212ENST00000521922 TRIM6-TRIM34B2RNG4 842 aa18.17■□□□□ 0.5
UBR5-212ENST00000521922 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
UBR5-212ENST00000521922 BECN2A8MW95 431 aa18.15■□□□□ 0.5
UBR5-212ENST00000521922 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
UBR5-212ENST00000521922 CWC15Q9P013 229 aaKnown RBP18.15■□□□□ 0.5
UBR5-212ENST00000521922 RGL3Q3MIN7 710 aa18.15■□□□□ 0.5
UBR5-212ENST00000521922 ACBD3Q9H3P7 528 aa18.15■□□□□ 0.5
UBR5-212ENST00000521922 POGKQ9P215 609 aa18.15■□□□□ 0.5
UBR5-212ENST00000521922 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
UBR5-212ENST00000521922 H3BQV1 296 aa18.14■□□□□ 0.49
UBR5-212ENST00000521922 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
UBR5-212ENST00000521922 CT47A1Q5JQC4 288 aaPredicted RBP18.13■□□□□ 0.49
UBR5-212ENST00000521922 HOMER1Q86YM7 354 aa18.13■□□□□ 0.49
UBR5-212ENST00000521922 ANKRD20A12PQ8NF67 263 aa18.12■□□□□ 0.49
UBR5-212ENST00000521922 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
UBR5-212ENST00000521922 HSP90B2PQ58FF3 399 aa18.12■□□□□ 0.49
UBR5-212ENST00000521922 DYDC1Q8WWB3 177 aa18.12■□□□□ 0.49
UBR5-212ENST00000521922 HSP90AB3PQ58FF7 597 aa18.11■□□□□ 0.49
UBR5-212ENST00000521922 ZNF330Q9Y3S2 320 aaPredicted RBP18.09■□□□□ 0.49
UBR5-212ENST00000521922 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
UBR5-212ENST00000521922 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.49
UBR5-212ENST00000521922 ST18O60284 1047 aa18.08■□□□□ 0.48
UBR5-212ENST00000521922 NAP1L1P55209 391 aaKnown RBP18.08■□□□□ 0.48
UBR5-212ENST00000521922 CCDC173Q0VFZ6 552 aa18.07■□□□□ 0.48
UBR5-212ENST00000521922 MYO6Q9UM54 1294 aa18.07■□□□□ 0.48
UBR5-212ENST00000521922 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
UBR5-212ENST00000521922 FRAT2O75474 233 aaPredicted RBP18.06■□□□□ 0.48
UBR5-212ENST00000521922 ARGLU1Q9NWB6 273 aaPredicted RBP18.06■□□□□ 0.48
UBR5-212ENST00000521922 HSP90AB2PQ58FF8 381 aa18.06■□□□□ 0.48
UBR5-212ENST00000521922 DDX11L8A8MPP1 907 aa18.05■□□□□ 0.48
UBR5-212ENST00000521922 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
UBR5-212ENST00000521922 TOMM22Q9NS69 142 aa18.05■□□□□ 0.48
UBR5-212ENST00000521922 HOOK1Q9UJC3 728 aaKnown RBP18.05■□□□□ 0.48
UBR5-212ENST00000521922 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
UBR5-212ENST00000521922 ZFYVE27Q5T4F4 411 aa18.04■□□□□ 0.48
UBR5-212ENST00000521922 SOX12O15370 315 aa18.04■□□□□ 0.48
UBR5-212ENST00000521922 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
UBR5-212ENST00000521922 NOL8Q76FK4 1167 aaKnown RBP18.03■□□□□ 0.48
UBR5-212ENST00000521922 ATP6V1DQ9Y5K8 247 aa18.03■□□□□ 0.48
UBR5-212ENST00000521922 CARD11Q9BXL7 1154 aa18.02■□□□□ 0.48
UBR5-212ENST00000521922 CCDC47Q96A33 483 aaKnown RBP18.02■□□□□ 0.48
UBR5-212ENST00000521922 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.47
UBR5-212ENST00000521922 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.47
UBR5-212ENST00000521922 NEFHP12036 1026 aa18.01■□□□□ 0.47
UBR5-212ENST00000521922 FOXD4L5Q5VV16 416 aaPredicted RBP18.01■□□□□ 0.47
UBR5-212ENST00000521922 FOXD4L4Q8WXT5 416 aaPredicted RBP18.01■□□□□ 0.47
UBR5-212ENST00000521922 PAF1Q8N7H5 531 aa18.01■□□□□ 0.47
UBR5-212ENST00000521922 INCENPQ9NQS7 918 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms