RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ABCC5O15440 1437 aa26.98■■□□□ 1.91
TRAPPC9-210ENST00000521667 CAMSAP2Q08AD1 1489 aa26.97■■□□□ 1.91
TRAPPC9-210ENST00000521667 ROCK1Q13464 1354 aa26.95■■□□□ 1.9
TRAPPC9-210ENST00000521667 UHRF1BP1LA0JNW5 1464 aa26.9■■□□□ 1.9
TRAPPC9-210ENST00000521667 CDC42BPAQ5VT25 1732 aa26.89■■□□□ 1.9
TRAPPC9-210ENST00000521667 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.89
TRAPPC9-210ENST00000521667 ZCCHC11Q5TAX3 1644 aaKnown RBP26.88■■□□□ 1.89
TRAPPC9-210ENST00000521667 ZNF777Q9ULD5 760 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC9-210ENST00000521667 SIN3AQ96ST3 1273 aa26.87■■□□□ 1.89
TRAPPC9-210ENST00000521667 KDM6BO15054 1643 aa26.84■■□□□ 1.89
TRAPPC9-210ENST00000521667 TIMELESSQ9UNS1 1208 aa26.83■■□□□ 1.89
TRAPPC9-210ENST00000521667 KDM5BQ9UGL1 1544 aa26.83■■□□□ 1.89
TRAPPC9-210ENST00000521667 NEUROD1Q13562 356 aa26.82■■□□□ 1.88
TRAPPC9-210ENST00000521667 ACIN1Q9UKV3 1341 aaKnown RBP26.82■■□□□ 1.88
TRAPPC9-210ENST00000521667 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
TRAPPC9-210ENST00000521667 ADGRL2O95490 1459 aa26.78■■□□□ 1.88
TRAPPC9-210ENST00000521667 TRIM52Q96A61 297 aa26.77■■□□□ 1.88
TRAPPC9-210ENST00000521667 ADGBQ8N7X0 1667 aa26.77■■□□□ 1.88
TRAPPC9-210ENST00000521667 NCOA1Q15788 1441 aa26.76■■□□□ 1.87
TRAPPC9-210ENST00000521667 PREX2Q70Z35 1606 aa26.76■■□□□ 1.87
TRAPPC9-210ENST00000521667 SHANK2Q9UPX8 1470 aa26.73■■□□□ 1.87
TRAPPC9-210ENST00000521667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.73■■□□□ 1.87
TRAPPC9-210ENST00000521667 KCNH8Q96L42 1107 aa26.73■■□□□ 1.87
TRAPPC9-210ENST00000521667 TTC37Q6PGP7 1564 aa26.72■■□□□ 1.87
TRAPPC9-210ENST00000521667 ANKRD30AQ9BXX3 1397 aa26.72■■□□□ 1.87
TRAPPC9-210ENST00000521667 DENND4BO75064 1496 aaPredicted RBP26.71■■□□□ 1.87
TRAPPC9-210ENST00000521667 CDC42BPBQ9Y5S2 1711 aa26.7■■□□□ 1.87
TRAPPC9-210ENST00000521667 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
TRAPPC9-210ENST00000521667 MPHOSPH9Q99550 1183 aa26.69■■□□□ 1.86
TRAPPC9-210ENST00000521667 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
TRAPPC9-210ENST00000521667 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
TRAPPC9-210ENST00000521667 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
TRAPPC9-210ENST00000521667 SAMD9LQ8IVG5 1584 aa26.68■■□□□ 1.86
TRAPPC9-210ENST00000521667 C9orf84Q5VXU9 1444 aa26.67■■□□□ 1.86
TRAPPC9-210ENST00000521667 MBD5Q9P267 1494 aa26.67■■□□□ 1.86
TRAPPC9-210ENST00000521667 TONSLQ96HA7 1378 aa26.66■■□□□ 1.86
TRAPPC9-210ENST00000521667 TSPY4P0CV99 314 aa26.65■■□□□ 1.86
TRAPPC9-210ENST00000521667 TSPY10P0CW01 314 aa26.65■■□□□ 1.86
TRAPPC9-210ENST00000521667 ARHGAP5Q13017 1502 aa26.64■■□□□ 1.86
TRAPPC9-210ENST00000521667 HNRNPMP52272 730 aaKnown RBP eCLIP26.64■■□□□ 1.869e-7■■■■■ 33.6
TRAPPC9-210ENST00000521667 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
TRAPPC9-210ENST00000521667 MYO5CQ9NQX4 1742 aa26.62■■□□□ 1.85
TRAPPC9-210ENST00000521667 CCDC141Q6ZP82 1450 aa26.62■■□□□ 1.85
TRAPPC9-210ENST00000521667 RSPH4AQ5TD94 716 aa26.61■■□□□ 1.85
TRAPPC9-210ENST00000521667 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
TRAPPC9-210ENST00000521667 WDR7Q9Y4E6 1490 aa26.6■■□□□ 1.85
TRAPPC9-210ENST00000521667 ANKRD50Q9ULJ7 1429 aa26.59■■□□□ 1.85
TRAPPC9-210ENST00000521667 ASXL2Q76L83 1435 aa26.58■■□□□ 1.85
TRAPPC9-210ENST00000521667 NPM1P06748 294 aaKnown RBP eCLIP26.57■■□□□ 1.84
TRAPPC9-210ENST00000521667 PLCH2O75038 1416 aa26.57■■□□□ 1.84
TRAPPC9-210ENST00000521667 PLEKHH2Q8IVE3 1493 aa26.57■■□□□ 1.84
TRAPPC9-210ENST00000521667 SYCP2Q9BX26 1530 aa26.56■■□□□ 1.84
TRAPPC9-210ENST00000521667 KIAA1107Q9UPP5 1409 aa26.55■■□□□ 1.84
TRAPPC9-210ENST00000521667 SLC4A1APQ9BWU0 796 aaKnown RBP26.55■■□□□ 1.84
TRAPPC9-210ENST00000521667 PZPP20742 1482 aa26.54■■□□□ 1.84
TRAPPC9-210ENST00000521667 KIF15Q9NS87 1388 aa26.52■■□□□ 1.84
TRAPPC9-210ENST00000521667 FOXD1Q16676 465 aa26.51■■□□□ 1.83
TRAPPC9-210ENST00000521667 ANKRD30BQ9BXX2 1392 aa26.51■■□□□ 1.83
TRAPPC9-210ENST00000521667 MAST1Q9Y2H9 1570 aa26.49■■□□□ 1.83
TRAPPC9-210ENST00000521667 EFCAB2Q5VUJ9 269 aa26.49■■□□□ 1.83
TRAPPC9-210ENST00000521667 ARAP3Q8WWN8 1544 aa26.46■■□□□ 1.83
TRAPPC9-210ENST00000521667 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
TRAPPC9-210ENST00000521667 ABCA9Q8IUA7 1624 aa26.43■■□□□ 1.82
TRAPPC9-210ENST00000521667 RPRD2Q5VT52 1461 aaKnown RBP26.43■■□□□ 1.82
TRAPPC9-210ENST00000521667 ABCC1P33527 1531 aa26.42■■□□□ 1.82
TRAPPC9-210ENST00000521667 KDM5DQ9BY66 1539 aa26.42■■□□□ 1.82
TRAPPC9-210ENST00000521667 NUP155O75694 1391 aa26.4■■□□□ 1.82
TRAPPC9-210ENST00000521667 MIER1Q8N108 512 aa26.39■■□□□ 1.82
TRAPPC9-210ENST00000521667 PLXNC1O60486 1568 aa26.39■■□□□ 1.81
TRAPPC9-210ENST00000521667 PKD2Q13563 968 aa26.37■■□□□ 1.81
TRAPPC9-210ENST00000521667 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
TRAPPC9-210ENST00000521667 TRAPPC8Q9Y2L5 1435 aa26.33■■□□□ 1.8
TRAPPC9-210ENST00000521667 TEX14Q8IWB6 1497 aa26.31■■□□□ 1.8
TRAPPC9-210ENST00000521667 DUOX2Q9NRD8 1548 aa26.3■■□□□ 1.8
TRAPPC9-210ENST00000521667 FANCAO15360 1455 aa26.3■■□□□ 1.8
TRAPPC9-210ENST00000521667 UNC13BO14795 1591 aa26.26■■□□□ 1.8
TRAPPC9-210ENST00000521667 CD109Q6YHK3 1445 aa26.26■■□□□ 1.79
TRAPPC9-210ENST00000521667 FAM135AQ9P2D6 1515 aa26.26■■□□□ 1.79
TRAPPC9-210ENST00000521667 ERBINQ96RT1 1412 aa26.25■■□□□ 1.79
TRAPPC9-210ENST00000521667 RTEL1-TNFRSF6BF6WH68 1400 aa26.25■■□□□ 1.79
TRAPPC9-210ENST00000521667 SPAG9O60271 1321 aaKnown RBP26.23■■□□□ 1.79
TRAPPC9-210ENST00000521667 HIRIP3Q9BW71 556 aaPredicted RBP26.22■■□□□ 1.79
TRAPPC9-210ENST00000521667 AFAP1Q8N556 730 aa26.21■■□□□ 1.79
TRAPPC9-210ENST00000521667 ZFYVE16Q7Z3T8 1539 aa26.2■■□□□ 1.79
TRAPPC9-210ENST00000521667 ADGRL1O94910 1474 aa26.2■■□□□ 1.78
TRAPPC9-210ENST00000521667 MAGI2Q86UL8 1455 aa26.17■■□□□ 1.78
TRAPPC9-210ENST00000521667 SCAPERQ9BY12 1400 aa26.17■■□□□ 1.78
TRAPPC9-210ENST00000521667 IQGAP3Q86VI3 1631 aa26.16■■□□□ 1.78
TRAPPC9-210ENST00000521667 NBPF8Q3BBV2 869 aa26.15■■□□□ 1.78
TRAPPC9-210ENST00000521667 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.78
TRAPPC9-210ENST00000521667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.14■■□□□ 1.78
TRAPPC9-210ENST00000521667 DIP2BQ9P265 1576 aa26.13■■□□□ 1.77
TRAPPC9-210ENST00000521667 INO80Q9ULG1 1556 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC9-210ENST00000521667 DDX10Q13206 875 aaKnown RBP26.13■■□□□ 1.77
TRAPPC9-210ENST00000521667 FAM69CQ0P6D2 419 aa26.12■■□□□ 1.77
TRAPPC9-210ENST00000521667 ATP7AQ04656 1500 aa26.12■■□□□ 1.77
TRAPPC9-210ENST00000521667 GLI2P10070 1586 aa26.12■■□□□ 1.77
TRAPPC9-210ENST00000521667 CFAP74Q9C0B2 1584 aa26.11■■□□□ 1.77
TRAPPC9-210ENST00000521667 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.776e-7■■■■■ 53.7
TRAPPC9-210ENST00000521667 HSPA5P11021 654 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms