RNA–Protein interactions for RNA: ENST00000521332.5

PTK2-231, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-231	ENST00000521332	SCAPER	Q9BY12	1400 aa		30.52	■■■□□ 2.48
PTK2-231	ENST00000521332	UBTF	P17480	764 aa	Known RBP	30.51	■■■□□ 2.47
PTK2-231	ENST00000521332	MAGI2	Q86UL8	1455 aa		30.5	■■■□□ 2.47
PTK2-231	ENST00000521332	FER1L4	A9Z1Z3	1794 aa		30.49	■■■□□ 2.47
PTK2-231	ENST00000521332	PLCH2	O75038	1416 aa		30.48	■■■□□ 2.47
PTK2-231	ENST00000521332	MYO5C	Q9NQX4	1742 aa		30.45	■■■□□ 2.47
PTK2-231	ENST00000521332	FMN1	Q68DA7	1419 aa		30.43	■■■□□ 2.46
PTK2-231	ENST00000521332	EFCAB2	Q5VUJ9	269 aa		30.42	■■■□□ 2.46
PTK2-231	ENST00000521332	CDK11A	Q9UQ88	783 aa	Predicted RBP	30.41	■■■□□ 2.46
PTK2-231	ENST00000521332	ATP10A	O60312	1499 aa		30.38	■■■□□ 2.45
PTK2-231	ENST00000521332	KIF14	Q15058	1648 aa		30.37	■■■□□ 2.45
PTK2-231	ENST00000521332	MYT1L	Q9UL68	1186 aa		30.37	■■■□□ 2.45
PTK2-231	ENST00000521332	C9orf84	Q5VXU9	1444 aa		30.36	■■■□□ 2.45
PTK2-231	ENST00000521332	ARHGAP35	Q9NRY4	1499 aa		30.36	■■■□□ 2.45
PTK2-231	ENST00000521332	ARHGAP5	Q13017	1502 aa		30.33	■■■□□ 2.45
PTK2-231	ENST00000521332	ARHGEF12	Q9NZN5	1544 aa		30.32	■■■□□ 2.44
PTK2-231	ENST00000521332	CLIP1	P30622	1438 aa		30.3	■■■□□ 2.44
PTK2-231	ENST00000521332	ZNF518A	Q6AHZ1	1483 aa		30.29	■■■□□ 2.44
PTK2-231	ENST00000521332	TRO	Q12816	1431 aa	Predicted RBP	30.29	■■■□□ 2.44
PTK2-231	ENST00000521332	CEBPA	P49715	358 aa	Predicted RBP	30.28	■■■□□ 2.44
PTK2-231	ENST00000521332	PREX1	Q8TCU6	1659 aa		30.27	■■■□□ 2.44
PTK2-231	ENST00000521332	AFAP1	Q8N556	730 aa		30.27	■■■□□ 2.44
PTK2-231	ENST00000521332	CERK	Q8TCT0	537 aa		30.26	■■■□□ 2.43
PTK2-231	ENST00000521332	LRRIQ1	Q96JM4	1722 aa		30.25	■■■□□ 2.43
PTK2-231	ENST00000521332	KDM5C	P41229	1560 aa		30.2	■■■□□ 2.43
PTK2-231	ENST00000521332	CDC42BPB	Q9Y5S2	1711 aa		30.18	■■■□□ 2.42
PTK2-231	ENST00000521332	DIP2C	Q9Y2E4	1556 aa		30.17	■■■□□ 2.42
PTK2-231	ENST00000521332	UHRF1BP1	Q6BDS2	1440 aa		30.14	■■■□□ 2.42
PTK2-231	ENST00000521332	CHIC1	Q5VXU3	224 aa		30.13	■■■□□ 2.41
PTK2-231	ENST00000521332	ESF1	Q9H501	851 aa	Known RBP	30.13	■■■□□ 2.41
PTK2-231	ENST00000521332	ABCA6	Q8N139	1617 aa		30.13	■■■□□ 2.41
PTK2-231	ENST00000521332	PREX2	Q70Z35	1606 aa		30.11	■■■□□ 2.41
PTK2-231	ENST00000521332	DMRT2	Q9Y5R5	561 aa		30.09	■■■□□ 2.41
PTK2-231	ENST00000521332	STRC	Q7RTU9	1775 aa		30.08	■■■□□ 2.41
PTK2-231	ENST00000521332	RERE	Q9P2R6	1566 aa		30.08	■■■□□ 2.41
PTK2-231	ENST00000521332	CCDC18	Q5T9S5	1454 aa		30.08	■■■□□ 2.41
PTK2-231	ENST00000521332	MLH3	Q9UHC1	1453 aa		30.08	■■■□□ 2.41
PTK2-231	ENST00000521332	ITSN2	Q9NZM3	1697 aa		30.07	■■■□□ 2.41
PTK2-231	ENST00000521332	ABCC1	P33527	1531 aa		30.07	■■■□□ 2.4
PTK2-231	ENST00000521332	TRAPPC8	Q9Y2L5	1435 aa		30.07	■■■□□ 2.4
PTK2-231	ENST00000521332	C3	P01024	1663 aa		30.07	■■■□□ 2.4
PTK2-231	ENST00000521332	SETD1B	Q9UPS6	1966 aa	Known RBP	30.05	■■■□□ 2.4
PTK2-231	ENST00000521332	CASKIN1	Q8WXD9	1431 aa		30.05	■■■□□ 2.4
PTK2-231	ENST00000521332	CDC42BPA	Q5VT25	1732 aa		30.01	■■■□□ 2.39
PTK2-231	ENST00000521332	ZNF777	Q9ULD5	760 aa	Predicted RBP	30	■■■□□ 2.39
PTK2-231	ENST00000521332	AGL	P35573	1532 aa		29.99	■■■□□ 2.39
PTK2-231	ENST00000521332	KIDINS220	Q9ULH0	1771 aa		29.98	■■■□□ 2.39
PTK2-231	ENST00000521332	FYCO1	Q9BQS8	1478 aa		29.92	■■■□□ 2.38
PTK2-231	ENST00000521332	CNTLN	Q9NXG0	1405 aa		29.9	■■■□□ 2.38
PTK2-231	ENST00000521332	SAMD9L	Q8IVG5	1584 aa		29.9	■■■□□ 2.38
PTK2-231	ENST00000521332	PTPRT	O14522	1441 aa		29.89	■■■□□ 2.38
PTK2-231	ENST00000521332	SYCP2	Q9BX26	1530 aa		29.89	■■■□□ 2.38
PTK2-231	ENST00000521332	SPAG9	O60271	1321 aa	Known RBP	29.87	■■■□□ 2.37
PTK2-231	ENST00000521332	SUPT6H	Q7KZ85	1726 aa	Known RBP	29.87	■■■□□ 2.37
PTK2-231	ENST00000521332	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.86	■■■□□ 2.37	1e-6	■■■■□ 24.2
PTK2-231	ENST00000521332	DISP3	Q9P2K9	1392 aa		29.86	■■■□□ 2.37
PTK2-231	ENST00000521332	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.83	■■■□□ 2.37
PTK2-231	ENST00000521332	MROH2A	A6NES4	1674 aa		29.82	■■■□□ 2.36
PTK2-231	ENST00000521332	NCOA1	Q15788	1441 aa		29.8	■■■□□ 2.36
PTK2-231	ENST00000521332	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.79	■■■□□ 2.36
PTK2-231	ENST00000521332	ATP7A	Q04656	1500 aa		29.79	■■■□□ 2.36
PTK2-231	ENST00000521332	ZMYM3	Q14202	1370 aa		29.78	■■■□□ 2.36
PTK2-231	ENST00000521332	CAMSAP1	Q5T5Y3	1602 aa		29.78	■■■□□ 2.36
PTK2-231	ENST00000521332	CLTC	Q00610	1675 aa	Known RBP	29.77	■■■□□ 2.36
PTK2-231	ENST00000521332	NPAT	Q14207	1427 aa		29.77	■■■□□ 2.36
PTK2-231	ENST00000521332	LTBP4	Q8N2S1	1624 aa		29.76	■■■□□ 2.35
PTK2-231	ENST00000521332	CCNB3	Q8WWL7	1395 aa		29.76	■■■□□ 2.35
PTK2-231	ENST00000521332	PLEKHH2	Q8IVE3	1493 aa		29.74	■■■□□ 2.35
PTK2-231	ENST00000521332	GGT6	Q6P531	493 aa		29.72	■■■□□ 2.35
PTK2-231	ENST00000521332	MTUS2	Q5JR59	1369 aa		29.72	■■■□□ 2.35
PTK2-231	ENST00000521332	A2M	P01023	1474 aa		29.72	■■■□□ 2.35
PTK2-231	ENST00000521332	INO80	Q9ULG1	1556 aa	Predicted RBP	29.72	■■■□□ 2.35
PTK2-231	ENST00000521332	ILDR2	Q71H61	639 aa		29.71	■■■□□ 2.35
PTK2-231	ENST00000521332	KIAA1107	Q9UPP5	1409 aa		29.71	■■■□□ 2.35
PTK2-231	ENST00000521332	NCKAP5L	Q9HCH0	1330 aa		29.71	■■■□□ 2.35
PTK2-231	ENST00000521332	PLXNC1	O60486	1568 aa		29.69	■■■□□ 2.34
PTK2-231	ENST00000521332	MYO3A	Q8NEV4	1616 aa		29.67	■■■□□ 2.34
PTK2-231	ENST00000521332	SPATA31D1	Q6ZQQ2	1576 aa		29.66	■■■□□ 2.34
PTK2-231	ENST00000521332	IQSEC2	Q5JU85	1478 aa		29.66	■■■□□ 2.34
PTK2-231	ENST00000521332	ZNF142	P52746	1687 aa	Predicted RBP	29.63	■■■□□ 2.33
PTK2-231	ENST00000521332	ADGB	Q8N7X0	1667 aa		29.63	■■■□□ 2.33
PTK2-231	ENST00000521332	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.62	■■■□□ 2.33
PTK2-231	ENST00000521332	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	29.62	■■■□□ 2.33
PTK2-231	ENST00000521332	ZNF644	Q9H582	1327 aa	Predicted RBP	29.61	■■■□□ 2.33
PTK2-231	ENST00000521332	PTPRK	Q15262	1439 aa		29.61	■■■□□ 2.33
PTK2-231	ENST00000521332	TIAM1	Q13009	1591 aa		29.59	■■■□□ 2.33
PTK2-231	ENST00000521332	PKD2	Q13563	968 aa		29.58	■■■□□ 2.33
PTK2-231	ENST00000521332	SOCS7	O14512	581 aa		29.57	■■■□□ 2.32
PTK2-231	ENST00000521332	PLA2R1	Q13018	1463 aa		29.56	■■■□□ 2.32
PTK2-231	ENST00000521332	EHBP1L1	Q8N3D4	1523 aa		29.55	■■■□□ 2.32
PTK2-231	ENST00000521332	UBAP1L	F5GYI3	381 aa		29.55	■■■□□ 2.32
PTK2-231	ENST00000521332	PPP6R1	Q9UPN7	881 aa		29.53	■■■□□ 2.32
PTK2-231	ENST00000521332	TCOF1	Q13428	1488 aa	Known RBP	29.51	■■■□□ 2.31
PTK2-231	ENST00000521332	MBD5	Q9P267	1494 aa		29.5	■■■□□ 2.31
PTK2-231	ENST00000521332	A2ML1	A8K2U0	1454 aa		29.47	■■■□□ 2.31
PTK2-231	ENST00000521332	RTEL1-TNFRSF6B	F6WH68	1400 aa		29.46	■■■□□ 2.31
PTK2-231	ENST00000521332	DHX29	Q7Z478	1369 aa	Known RBP	29.46	■■■□□ 2.31
PTK2-231	ENST00000521332	CEP162	Q5TB80	1403 aa		29.45	■■■□□ 2.31
PTK2-231	ENST00000521332	DNMT1	P26358	1616 aa	Known RBP	29.45	■■■□□ 2.31
PTK2-231	ENST00000521332	KIF3B	O15066	747 aa		29.45	■■■□□ 2.31

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms