RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 HSPA5P11021 654 aaKnown RBP15.85■□□□□ 0.13
CLK4-206ENST00000520878 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
CLK4-206ENST00000520878 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
CLK4-206ENST00000520878 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
CLK4-206ENST00000520878 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
CLK4-206ENST00000520878 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
CLK4-206ENST00000520878 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
CLK4-206ENST00000520878 NEFLP07196 543 aa15.81■□□□□ 0.12
CLK4-206ENST00000520878 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
CLK4-206ENST00000520878 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
CLK4-206ENST00000520878 TROQ12816 1431 aaPredicted RBP15.8■□□□□ 0.12
CLK4-206ENST00000520878 NUP155O75694 1391 aa15.8■□□□□ 0.12
CLK4-206ENST00000520878 MIA2Q96PC5 1412 aa15.79■□□□□ 0.12
CLK4-206ENST00000520878 UGGT2Q9NYU1 1516 aa15.79■□□□□ 0.12
CLK4-206ENST00000520878 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
CLK4-206ENST00000520878 PELP1Q8IZL8 1130 aaKnown RBP15.78■□□□□ 0.12
CLK4-206ENST00000520878 DAPK1P53355 1430 aa15.76■□□□□ 0.11
CLK4-206ENST00000520878 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLK4-206ENST00000520878 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
CLK4-206ENST00000520878 ABCC5O15440 1437 aa15.74■□□□□ 0.11
CLK4-206ENST00000520878 KIAA0556O60303 1618 aa15.74■□□□□ 0.11
CLK4-206ENST00000520878 SENP3-EIF4A1A0A087X0R7 540 aa15.73■□□□□ 0.11
CLK4-206ENST00000520878 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
CLK4-206ENST00000520878 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLK4-206ENST00000520878 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
CLK4-206ENST00000520878 CARD11Q9BXL7 1154 aa15.69■□□□□ 0.1
CLK4-206ENST00000520878 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
CLK4-206ENST00000520878 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
CLK4-206ENST00000520878 FKBP8Q14318 412 aa15.69■□□□□ 0.1
CLK4-206ENST00000520878 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
CLK4-206ENST00000520878 MRS2Q9HD23 443 aa15.68■□□□□ 0.1
CLK4-206ENST00000520878 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
CLK4-206ENST00000520878 ATP10BO94823 1461 aa15.66■□□□□ 0.1
CLK4-206ENST00000520878 GPATCH8Q9UKJ3 1502 aaKnown RBP15.66■□□□□ 0.1
CLK4-206ENST00000520878 EFCAB2Q5VUJ9 269 aa15.66■□□□□ 0.1
CLK4-206ENST00000520878 NUP160Q12769 1436 aa15.66■□□□□ 0.1
CLK4-206ENST00000520878 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
CLK4-206ENST00000520878 KIF15Q9NS87 1388 aa15.65■□□□□ 0.1
CLK4-206ENST00000520878 WASHC2AQ641Q2 1341 aa15.63■□□□□ 0.09
CLK4-206ENST00000520878 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
CLK4-206ENST00000520878 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
CLK4-206ENST00000520878 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
CLK4-206ENST00000520878 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
CLK4-206ENST00000520878 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
CLK4-206ENST00000520878 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
CLK4-206ENST00000520878 C9orf84Q5VXU9 1444 aa15.61■□□□□ 0.09
CLK4-206ENST00000520878 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
CLK4-206ENST00000520878 ANKRD30BQ9BXX2 1392 aa15.6■□□□□ 0.09
CLK4-206ENST00000520878 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
CLK4-206ENST00000520878 AFAP1Q8N556 730 aa15.6■□□□□ 0.09
CLK4-206ENST00000520878 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
CLK4-206ENST00000520878 C11orf95C9JLR9 678 aaPredicted RBP15.59■□□□□ 0.09
CLK4-206ENST00000520878 RSPH4AQ5TD94 716 aa15.59■□□□□ 0.09
CLK4-206ENST00000520878 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
CLK4-206ENST00000520878 KDM6BO15054 1643 aa15.57■□□□□ 0.08
CLK4-206ENST00000520878 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
CLK4-206ENST00000520878 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
CLK4-206ENST00000520878 KIF14Q15058 1648 aa15.55■□□□□ 0.08
CLK4-206ENST00000520878 ARHGAP5Q13017 1502 aa15.55■□□□□ 0.08
CLK4-206ENST00000520878 ST20-MTHFSA0A0A6YYL1 179 aa15.54■□□□□ 0.08
CLK4-206ENST00000520878 TMC1Q8TDI8 760 aa15.53■□□□□ 0.08
CLK4-206ENST00000520878 KIF3BO15066 747 aa15.53■□□□□ 0.08
CLK4-206ENST00000520878 KIAA1107Q9UPP5 1409 aa15.52■□□□□ 0.08
CLK4-206ENST00000520878 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
CLK4-206ENST00000520878 OSCARQ8IYS5 282 aa15.52■□□□□ 0.07
CLK4-206ENST00000520878 USP47Q96K76 1375 aa15.5■□□□□ 0.07
CLK4-206ENST00000520878 CCDC184Q52MB2 194 aa15.5■□□□□ 0.07
CLK4-206ENST00000520878 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
CLK4-206ENST00000520878 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
CLK4-206ENST00000520878 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
CLK4-206ENST00000520878 GGT6Q6P531 493 aa15.48■□□□□ 0.07
CLK4-206ENST00000520878 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
CLK4-206ENST00000520878 RPRD2Q5VT52 1461 aaKnown RBP15.47■□□□□ 0.07
CLK4-206ENST00000520878 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.07
CLK4-206ENST00000520878 NBPF1Q3BBV0 1214 aa15.45■□□□□ 0.06
CLK4-206ENST00000520878 CCDC141Q6ZP82 1450 aa15.44■□□□□ 0.06
CLK4-206ENST00000520878 DENND4BO75064 1496 aaPredicted RBP15.43■□□□□ 0.06
CLK4-206ENST00000520878 CC2D1BQ5T0F9 858 aaKnown RBP15.43■□□□□ 0.06
CLK4-206ENST00000520878 PZPP20742 1482 aa15.42■□□□□ 0.06
CLK4-206ENST00000520878 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
CLK4-206ENST00000520878 ABCA8O94911 1581 aa15.41■□□□□ 0.06
CLK4-206ENST00000520878 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
CLK4-206ENST00000520878 ITSN2Q9NZM3 1697 aa15.4■□□□□ 0.06
CLK4-206ENST00000520878 CNTLNQ9NXG0 1405 aa15.39■□□□□ 0.05
CLK4-206ENST00000520878 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
CLK4-206ENST00000520878 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
CLK4-206ENST00000520878 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
CLK4-206ENST00000520878 SYCP2Q9BX26 1530 aa15.37■□□□□ 0.05
CLK4-206ENST00000520878 KANK1Q14678 1352 aa15.37■□□□□ 0.05
CLK4-206ENST00000520878 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
CLK4-206ENST00000520878 CHD1O14646 1710 aa15.36■□□□□ 0.05
CLK4-206ENST00000520878 NUTM2DQ5VT03 806 aaPredicted RBP15.35■□□□□ 0.05
CLK4-206ENST00000520878 TMF1P82094 1093 aa15.34■□□□□ 0.05
CLK4-206ENST00000520878 TRAPPC8Q9Y2L5 1435 aa15.32■□□□□ 0.04
CLK4-206ENST00000520878 MBD5Q9P267 1494 aa15.32■□□□□ 0.04
CLK4-206ENST00000520878 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
CLK4-206ENST00000520878 ABCC2Q92887 1545 aa15.31■□□□□ 0.04
CLK4-206ENST00000520878 PLCH2O75038 1416 aa15.31■□□□□ 0.04
CLK4-206ENST00000520878 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
CLK4-206ENST00000520878 RAPGEF3O95398 923 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms