RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
PCDHGB6-201ENST00000520790 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.17
PCDHGB6-201ENST00000520790 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.17
PCDHGB6-201ENST00000520790 CANXP27824 592 aaKnown RBP16.07■□□□□ 0.16
PCDHGB6-201ENST00000520790 TXNDC2Q86VQ3 553 aa16.07■□□□□ 0.16
PCDHGB6-201ENST00000520790 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
PCDHGB6-201ENST00000520790 ATF3P18847 181 aa16.06■□□□□ 0.16
PCDHGB6-201ENST00000520790 UACAQ9BZF9 1416 aa16.06■□□□□ 0.16
PCDHGB6-201ENST00000520790 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
PCDHGB6-201ENST00000520790 CD109Q6YHK3 1445 aa16.06■□□□□ 0.16
PCDHGB6-201ENST00000520790 SCAPERQ9BY12 1400 aa16.06■□□□□ 0.16
PCDHGB6-201ENST00000520790 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB6-201ENST00000520790 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
PCDHGB6-201ENST00000520790 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
PCDHGB6-201ENST00000520790 EIF4G2P78344 907 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCDHGB6-201ENST00000520790 POGZQ7Z3K3 1410 aa16.03■□□□□ 0.16
PCDHGB6-201ENST00000520790 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
PCDHGB6-201ENST00000520790 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.16
PCDHGB6-201ENST00000520790 DDX10Q13206 875 aaKnown RBP16.02■□□□□ 0.15
PCDHGB6-201ENST00000520790 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
PCDHGB6-201ENST00000520790 GRIN2AQ12879 1464 aa16.01■□□□□ 0.15
PCDHGB6-201ENST00000520790 TRAK1Q9UPV9 953 aa16.01■□□□□ 0.15
PCDHGB6-201ENST00000520790 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
PCDHGB6-201ENST00000520790 CLSPNQ9HAW4 1339 aa16■□□□□ 0.15
PCDHGB6-201ENST00000520790 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
PCDHGB6-201ENST00000520790 MPHOSPH9Q99550 1183 aa15.99■□□□□ 0.15
PCDHGB6-201ENST00000520790 ANKLE2Q86XL3 938 aa15.99■□□□□ 0.15
PCDHGB6-201ENST00000520790 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
PCDHGB6-201ENST00000520790 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDHGB6-201ENST00000520790 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
PCDHGB6-201ENST00000520790 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
PCDHGB6-201ENST00000520790 HSPA2P54652 639 aa15.96■□□□□ 0.15
PCDHGB6-201ENST00000520790 EVA1CP58658 441 aa15.95■□□□□ 0.14
PCDHGB6-201ENST00000520790 LTV1Q96GA3 475 aaPredicted RBP15.93■□□□□ 0.14
PCDHGB6-201ENST00000520790 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
PCDHGB6-201ENST00000520790 PSME1Q06323 249 aa15.91■□□□□ 0.14
PCDHGB6-201ENST00000520790 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
PCDHGB6-201ENST00000520790 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCDHGB6-201ENST00000520790 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
PCDHGB6-201ENST00000520790 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
PCDHGB6-201ENST00000520790 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
PCDHGB6-201ENST00000520790 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
PCDHGB6-201ENST00000520790 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
PCDHGB6-201ENST00000520790 MINK1Q8N4C8 1332 aaPredicted RBP15.89■□□□□ 0.13
PCDHGB6-201ENST00000520790 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
PCDHGB6-201ENST00000520790 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
PCDHGB6-201ENST00000520790 ZNF330Q9Y3S2 320 aaPredicted RBP15.88■□□□□ 0.13
PCDHGB6-201ENST00000520790 TMF1P82094 1093 aa15.87■□□□□ 0.13
PCDHGB6-201ENST00000520790 UBAP1LF5GYI3 381 aa15.86■□□□□ 0.13
PCDHGB6-201ENST00000520790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
PCDHGB6-201ENST00000520790 RBM33Q96EV2 1170 aaKnown RBP15.85■□□□□ 0.13
PCDHGB6-201ENST00000520790 MSH5O43196 834 aa15.85■□□□□ 0.13
PCDHGB6-201ENST00000520790 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
PCDHGB6-201ENST00000520790 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
PCDHGB6-201ENST00000520790 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
PCDHGB6-201ENST00000520790 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
PCDHGB6-201ENST00000520790 CC2D1BQ5T0F9 858 aaKnown RBP15.82■□□□□ 0.12
PCDHGB6-201ENST00000520790 ESCO1Q5FWF5 840 aa15.81■□□□□ 0.12
PCDHGB6-201ENST00000520790 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
PCDHGB6-201ENST00000520790 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
PCDHGB6-201ENST00000520790 AMPHP49418 695 aa15.8■□□□□ 0.12
PCDHGB6-201ENST00000520790 MYOM3Q5VTT5 1437 aa15.8■□□□□ 0.12
PCDHGB6-201ENST00000520790 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
PCDHGB6-201ENST00000520790 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
PCDHGB6-201ENST00000520790 NUTM2GQ5VZR2 741 aa15.79■□□□□ 0.12
PCDHGB6-201ENST00000520790 FBXO31Q5XUX0 539 aaPredicted RBP15.79■□□□□ 0.12
PCDHGB6-201ENST00000520790 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
PCDHGB6-201ENST00000520790 CCDC144AA2RUR9 1427 aa15.78■□□□□ 0.12
PCDHGB6-201ENST00000520790 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
PCDHGB6-201ENST00000520790 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
PCDHGB6-201ENST00000520790 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
PCDHGB6-201ENST00000520790 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
PCDHGB6-201ENST00000520790 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.11
PCDHGB6-201ENST00000520790 MRS2Q9HD23 443 aa15.77■□□□□ 0.11
PCDHGB6-201ENST00000520790 MAPK8IP3Q9UPT6 1336 aa15.77■□□□□ 0.11
PCDHGB6-201ENST00000520790 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
PCDHGB6-201ENST00000520790 TERF2IPQ9NYB0 399 aa15.76■□□□□ 0.11
PCDHGB6-201ENST00000520790 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
PCDHGB6-201ENST00000520790 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
PCDHGB6-201ENST00000520790 DENND4BO75064 1496 aaPredicted RBP15.73■□□□□ 0.11
PCDHGB6-201ENST00000520790 ADGRL1O94910 1474 aa15.73■□□□□ 0.11
PCDHGB6-201ENST00000520790 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
PCDHGB6-201ENST00000520790 L3MBTL2Q969R5 705 aa15.72■□□□□ 0.11
PCDHGB6-201ENST00000520790 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
PCDHGB6-201ENST00000520790 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
PCDHGB6-201ENST00000520790 XPCQ01831 940 aaPredicted RBP15.72■□□□□ 0.11
PCDHGB6-201ENST00000520790 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
PCDHGB6-201ENST00000520790 AKNAQ7Z591 1439 aa15.71■□□□□ 0.11
PCDHGB6-201ENST00000520790 PMFBP1Q8TBY8 1022 aa15.71■□□□□ 0.11
PCDHGB6-201ENST00000520790 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
PCDHGB6-201ENST00000520790 CASKIN1Q8WXD9 1431 aa15.71■□□□□ 0.11
PCDHGB6-201ENST00000520790 TOM1O60784 492 aa15.71■□□□□ 0.1
PCDHGB6-201ENST00000520790 PRXQ9BXM0 1461 aa15.71■□□□□ 0.1
PCDHGB6-201ENST00000520790 STRN4Q9NRL3 753 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms