RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	FHOD3	Q2V2M9	1422 aa		14.07	□□□□□ -0.16
RUNX1T1-223	ENST00000520172	SRCAP	Q6ZRS2	3230 aa		14.04	□□□□□ -0.16
RUNX1T1-223	ENST00000520172	MAGI2	Q86UL8	1455 aa		14.01	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	CAMSAP1	Q5T5Y3	1602 aa		14	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	ATP10B	O94823	1461 aa		13.99	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	TOM1	O60784	492 aa		13.99	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	RGS17	Q9UGC6	210 aa	Predicted RBP	13.99	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	HECW1	Q76N89	1606 aa		13.99	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	CFAP74	Q9C0B2	1584 aa		13.99	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	C3	P01024	1663 aa		13.98	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	C9orf84	Q5VXU9	1444 aa		13.97	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	NCKAP5L	Q9HCH0	1330 aa		13.96	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	GOLGA3	Q08378	1498 aa		13.96	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	SENP3	Q9H4L4	574 aa	Predicted RBP	13.96	□□□□□ -0.17
RUNX1T1-223	ENST00000520172	SETD1A	O15047	1707 aa	Known RBP	13.95	□□□□□ -0.18
RUNX1T1-223	ENST00000520172	ATP10A	O60312	1499 aa		13.94	□□□□□ -0.18
RUNX1T1-223	ENST00000520172	TRAPPC8	Q9Y2L5	1435 aa		13.93	□□□□□ -0.18
RUNX1T1-223	ENST00000520172	RAPGEF2	Q9Y4G8	1499 aa		13.9	□□□□□ -0.18
RUNX1T1-223	ENST00000520172	CTTNBP2	Q8WZ74	1663 aa		13.89	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.89	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.89	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	POTEA	Q6S8J7	498 aa		13.89	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	PKD2	Q13563	968 aa		13.86	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	ESF1	Q9H501	851 aa	Known RBP	13.86	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	PPP6R1	Q9UPN7	881 aa		13.86	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	PTPRK	Q15262	1439 aa		13.86	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	CPS1	P31327	1500 aa		13.85	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.85	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.85	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	ALK	Q9UM73	1620 aa		13.85	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	SCAPER	Q9BY12	1400 aa		13.84	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	PLA2R1	Q13018	1463 aa		13.84	□□□□□ -0.19
RUNX1T1-223	ENST00000520172	TCOF1	Q13428	1488 aa	Known RBP	13.83	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	RAPGEF6	Q8TEU7	1601 aa		13.79	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	ZNF142	P52746	1687 aa	Predicted RBP	13.79	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	NPAT	Q14207	1427 aa		13.79	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	SHANK2	Q9UPX8	1470 aa		13.78	□□□□□ -0.2
RUNX1T1-223	ENST00000520172	P3H3	Q8IVL6	736 aa		13.77	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	MYO3A	Q8NEV4	1616 aa		13.77	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	CNTLN	Q9NXG0	1405 aa		13.76	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	DIP2C	Q9Y2E4	1556 aa		13.75	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.75	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	AGL	P35573	1532 aa		13.75	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	MYT1L	Q9UL68	1186 aa		13.75	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	RERE	Q9P2R6	1566 aa		13.75	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	PLEKHD1	A6NEE1	506 aa		13.73	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	MROH2A	A6NES4	1674 aa		13.72	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	NUP153	P49790	1475 aa	Known RBP	13.72	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	ZNF518A	Q6AHZ1	1483 aa		13.72	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	SUPT5H	O00267	1087 aa	Known RBP	13.71	□□□□□ -0.21
RUNX1T1-223	ENST00000520172	ABCA6	Q8N139	1617 aa		13.71	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	POLR1A	O95602	1720 aa	Predicted RBP	13.7	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	RNF17	Q9BXT8	1623 aa	Known RBP	13.7	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	KDM5C	P41229	1560 aa		13.7	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	VWDE	Q8N2E2	1590 aa		13.68	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	NEURL4	Q96JN8	1562 aa		13.67	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	PLCH2	O75038	1416 aa		13.67	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	ZMYM3	Q14202	1370 aa		13.67	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	AFAP1	Q8N556	730 aa		13.65	□□□□□ -0.22
RUNX1T1-223	ENST00000520172	TRIM52	Q96A61	297 aa		13.63	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	MYO5C	Q9NQX4	1742 aa		13.62	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	DNMT1	P26358	1616 aa	Known RBP	13.62	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	EFCAB2	Q5VUJ9	269 aa		13.62	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	LRRC7	Q96NW7	1537 aa		13.62	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	CLTC	Q00610	1675 aa	Known RBP	13.61	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	A2ML1	A8K2U0	1454 aa		13.61	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	SYNM	O15061	1565 aa		13.6	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	SAMD9	Q5K651	1589 aa		13.6	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	MLH3	Q9UHC1	1453 aa		13.59	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	STRCP1	A6NGW2	1772 aa		13.58	□□□□□ -0.23
RUNX1T1-223	ENST00000520172	ARHGAP5	Q13017	1502 aa		13.55	□□□□□ -0.24
RUNX1T1-223	ENST00000520172	NPHP4	O75161	1426 aa	Predicted RBP	13.54	□□□□□ -0.24
RUNX1T1-223	ENST00000520172	KIDINS220	Q9ULH0	1771 aa		13.53	□□□□□ -0.24
RUNX1T1-223	ENST00000520172	ANKLE2	Q86XL3	938 aa		13.52	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	CDK13	Q14004	1512 aa	Known RBP	13.52	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	IQGAP1	P46940	1657 aa		13.51	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	FAM135B	Q49AJ0	1406 aa		13.51	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	ITSN2	Q9NZM3	1697 aa		13.5	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	SETBP1	Q9Y6X0	1596 aa		13.5	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	DEPDC5	O75140	1603 aa		13.49	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	MED14	O60244	1454 aa		13.48	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	ROBO1	Q9Y6N7	1651 aa		13.48	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	ZNF772	Q68DY9	489 aa	Predicted RBP	13.48	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	ZRANB1	Q9UGI0	708 aa		13.48	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	ABCC1	P33527	1531 aa		13.48	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	KIF14	Q15058	1648 aa		13.46	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	XIRP1	Q702N8	1843 aa	Known RBP	13.46	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	RXRB	P28702	533 aa		13.46	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	PRX	Q9BXM0	1461 aa		13.46	□□□□□ -0.25
RUNX1T1-223	ENST00000520172	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.45	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	MEX3C	Q5U5Q3	659 aa	Known RBP	13.45	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	RBM33	Q96EV2	1170 aa	Known RBP	13.45	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	FOXD1	Q16676	465 aa		13.44	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	JCAD	Q9P266	1359 aa		13.44	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	RANGAP1	P46060	587 aa	Predicted RBP	13.43	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	TNR	Q92752	1358 aa		13.43	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	LRP6	O75581	1613 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms