RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 PLCH2O75038 1416 aa9.36□□□□□ -0.91
CTNNA1-219ENST00000520158 CFAP74Q9C0B2 1584 aa9.36□□□□□ -0.91
CTNNA1-219ENST00000520158 MAGI2Q86UL8 1455 aa9.35□□□□□ -0.91
CTNNA1-219ENST00000520158 ARHGAP35Q9NRY4 1499 aa9.35□□□□□ -0.91
CTNNA1-219ENST00000520158 UBTFP17480 764 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-219ENST00000520158 PTPRMP28827 1452 aa9.34□□□□□ -0.91
CTNNA1-219ENST00000520158 BCORL1Q5H9F3 1711 aa9.34□□□□□ -0.91
CTNNA1-219ENST00000520158 CDK11AQ9UQ88 783 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-219ENST00000520158 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.91
CTNNA1-219ENST00000520158 TTC37Q6PGP7 1564 aa9.33□□□□□ -0.92
CTNNA1-219ENST00000520158 CDK13Q14004 1512 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-219ENST00000520158 ARHGEF40Q8TER5 1519 aa9.32□□□□□ -0.92
CTNNA1-219ENST00000520158 HECW1Q76N89 1606 aa9.32□□□□□ -0.92
CTNNA1-219ENST00000520158 MYT1Q01538 1121 aa9.32□□□□□ -0.92
CTNNA1-219ENST00000520158 EFCAB2Q5VUJ9 269 aa9.3□□□□□ -0.92
CTNNA1-219ENST00000520158 TROQ12816 1431 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-219ENST00000520158 SCAPERQ9BY12 1400 aa9.3□□□□□ -0.92
CTNNA1-219ENST00000520158 ILDR1Q86SU0 546 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-219ENST00000520158 POGZQ7Z3K3 1410 aa9.29□□□□□ -0.92
CTNNA1-219ENST00000520158 MYO5CQ9NQX4 1742 aa9.28□□□□□ -0.92
CTNNA1-219ENST00000520158 MADDQ8WXG6 1647 aa9.28□□□□□ -0.92
CTNNA1-219ENST00000520158 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
CTNNA1-219ENST00000520158 YEATS2Q9ULM3 1422 aa9.28□□□□□ -0.92
CTNNA1-219ENST00000520158 ARID4BQ4LE39 1312 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-219ENST00000520158 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
CTNNA1-219ENST00000520158 LRRIQ1Q96JM4 1722 aa9.27□□□□□ -0.93
CTNNA1-219ENST00000520158 ATP10AO60312 1499 aa9.27□□□□□ -0.93
CTNNA1-219ENST00000520158 SIGLEC1Q9BZZ2 1709 aa9.26□□□□□ -0.93
CTNNA1-219ENST00000520158 CLIP1P30622 1438 aa9.26□□□□□ -0.93
CTNNA1-219ENST00000520158 KIF14Q15058 1648 aa9.26□□□□□ -0.93
CTNNA1-219ENST00000520158 KDM5CP41229 1560 aa9.25□□□□□ -0.93
CTNNA1-219ENST00000520158 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-219ENST00000520158 CCDC18Q5T9S5 1454 aa9.25□□□□□ -0.93
CTNNA1-219ENST00000520158 ZNF518AQ6AHZ1 1483 aa9.25□□□□□ -0.93
CTNNA1-219ENST00000520158 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
CTNNA1-219ENST00000520158 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
CTNNA1-219ENST00000520158 DSG3P32926 999 aa9.24□□□□□ -0.93
CTNNA1-219ENST00000520158 CDC42BPBQ9Y5S2 1711 aa9.24□□□□□ -0.93
CTNNA1-219ENST00000520158 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
CTNNA1-219ENST00000520158 C9orf84Q5VXU9 1444 aa9.23□□□□□ -0.93
CTNNA1-219ENST00000520158 RIMS1Q86UR5 1692 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-219ENST00000520158 MLH3Q9UHC1 1453 aa9.23□□□□□ -0.93
CTNNA1-219ENST00000520158 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
CTNNA1-219ENST00000520158 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-219ENST00000520158 EHMT2Q96KQ7 1210 aa9.23□□□□□ -0.93
CTNNA1-219ENST00000520158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.934e-8■□□□□ 10.1
CTNNA1-219ENST00000520158 ARHGAP5Q13017 1502 aa9.22□□□□□ -0.93
CTNNA1-219ENST00000520158 AFAP1Q8N556 730 aa9.22□□□□□ -0.93
CTNNA1-219ENST00000520158 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.93
CTNNA1-219ENST00000520158 PREX2Q70Z35 1606 aa9.21□□□□□ -0.93
CTNNA1-219ENST00000520158 AGLP35573 1532 aa9.21□□□□□ -0.94
CTNNA1-219ENST00000520158 SETD1BQ9UPS6 1966 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-219ENST00000520158 FER1L4A9Z1Z3 1794 aa9.19□□□□□ -0.94
CTNNA1-219ENST00000520158 FBXO41Q8TF61 875 aa9.19□□□□□ -0.94
CTNNA1-219ENST00000520158 ABCC1P33527 1531 aa9.19□□□□□ -0.94
CTNNA1-219ENST00000520158 DIP2CQ9Y2E4 1556 aa9.19□□□□□ -0.94
CTNNA1-219ENST00000520158 CDC42BPAQ5VT25 1732 aa9.19□□□□□ -0.94
CTNNA1-219ENST00000520158 TRAPPC8Q9Y2L5 1435 aa9.18□□□□□ -0.94
CTNNA1-219ENST00000520158 ITSN2Q9NZM3 1697 aa9.17□□□□□ -0.94
CTNNA1-219ENST00000520158 GPATCH8Q9UKJ3 1502 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-219ENST00000520158 KIAA1107Q9UPP5 1409 aa9.17□□□□□ -0.94
CTNNA1-219ENST00000520158 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
CTNNA1-219ENST00000520158 MLECQ14165 292 aa9.16□□□□□ -0.94
CTNNA1-219ENST00000520158 ABCA6Q8N139 1617 aa9.16□□□□□ -0.94
CTNNA1-219ENST00000520158 HSPA2P54652 639 aa9.15□□□□□ -0.94
CTNNA1-219ENST00000520158 PREX1Q8TCU6 1659 aa9.15□□□□□ -0.94
CTNNA1-219ENST00000520158 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.95
CTNNA1-219ENST00000520158 SAMD9LQ8IVG5 1584 aa9.14□□□□□ -0.95
CTNNA1-219ENST00000520158 CEBPAP49715 358 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-219ENST00000520158 CNTLNQ9NXG0 1405 aa9.13□□□□□ -0.95
CTNNA1-219ENST00000520158 CFDP1Q9UEE9 299 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-219ENST00000520158 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
CTNNA1-219ENST00000520158 SPAG9O60271 1321 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-219ENST00000520158 C3P01024 1663 aa9.11□□□□□ -0.95
CTNNA1-219ENST00000520158 HNRNPMP52272 730 aaKnown RBP eCLIP9.11□□□□□ -0.957e-14■■■■■ 45.2
CTNNA1-219ENST00000520158 MYT1LQ9UL68 1186 aa9.11□□□□□ -0.95
CTNNA1-219ENST00000520158 STRCQ7RTU9 1775 aa9.11□□□□□ -0.95
CTNNA1-219ENST00000520158 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 MROH2AA6NES4 1674 aa9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 SPINK5Q9NQ38 1064 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 CEP162Q5TB80 1403 aa9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 UHRF1BP1Q6BDS2 1440 aa9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 INO80Q9ULG1 1556 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 MTUS2Q5JR59 1369 aa9.1□□□□□ -0.95
CTNNA1-219ENST00000520158 MBD5Q9P267 1494 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 PLXNC1O60486 1568 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 RTEL1-TNFRSF6BF6WH68 1400 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 NPATQ14207 1427 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 ATP7AQ04656 1500 aa9.09□□□□□ -0.95
CTNNA1-219ENST00000520158 PTPRTO14522 1441 aa9.08□□□□□ -0.96
CTNNA1-219ENST00000520158 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-219ENST00000520158 EHBP1L1Q8N3D4 1523 aa9.08□□□□□ -0.96
CTNNA1-219ENST00000520158 ZMYM3Q14202 1370 aa9.08□□□□□ -0.96
CTNNA1-219ENST00000520158 A2MP01023 1474 aa9.08□□□□□ -0.96
CTNNA1-219ENST00000520158 TIAM1Q13009 1591 aa9.07□□□□□ -0.96
CTNNA1-219ENST00000520158 ADGBQ8N7X0 1667 aa9.06□□□□□ -0.96
CTNNA1-219ENST00000520158 ZNF644Q9H582 1327 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms