RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ABCC5O15440 1437 aa39.46■■■■□ 3.91
COL13A1-212ENST00000520133 ROCK1Q13464 1354 aa39.45■■■■□ 3.91
COL13A1-212ENST00000520133 RRP7BPQ9NSQ0 103 aa39.44■■■■□ 3.9
COL13A1-212ENST00000520133 OSCARQ8IYS5 282 aa39.4■■■■□ 3.9
COL13A1-212ENST00000520133 ZNF777Q9ULD5 760 aaPredicted RBP39.38■■■■□ 3.89
COL13A1-212ENST00000520133 ZCCHC11Q5TAX3 1644 aaKnown RBP39.37■■■■□ 3.89
COL13A1-212ENST00000520133 KDM5BQ9UGL1 1544 aa39.36■■■■□ 3.89
COL13A1-212ENST00000520133 ACIN1Q9UKV3 1341 aaKnown RBP39.33■■■■□ 3.89
COL13A1-212ENST00000520133 CROCC2H7BZ55 1655 aa39.33■■■■□ 3.89
COL13A1-212ENST00000520133 PREX2Q70Z35 1606 aa39.31■■■■□ 3.88
COL13A1-212ENST00000520133 ADGBQ8N7X0 1667 aa39.31■■■■□ 3.88
COL13A1-212ENST00000520133 CDC42BPBQ9Y5S2 1711 aa39.28■■■■□ 3.88
COL13A1-212ENST00000520133 ZNF316A6NFI3 1004 aaPredicted RBP39.26■■■■□ 3.88
COL13A1-212ENST00000520133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.24■■■■□ 3.87
COL13A1-212ENST00000520133 KDM6BO15054 1643 aa39.23■■■■□ 3.87
COL13A1-212ENST00000520133 TTC37Q6PGP7 1564 aa39.23■■■■□ 3.87
COL13A1-212ENST00000520133 ADGRL2O95490 1459 aa39.22■■■■□ 3.87
COL13A1-212ENST00000520133 MYO5CQ9NQX4 1742 aa39.2■■■■□ 3.87
COL13A1-212ENST00000520133 SHANK2Q9UPX8 1470 aa39.19■■■■□ 3.86
COL13A1-212ENST00000520133 TIMELESSQ9UNS1 1208 aa39.18■■■■□ 3.86
COL13A1-212ENST00000520133 ARHGEF5Q12774 1597 aa39.17■■■■□ 3.86
COL13A1-212ENST00000520133 NCOA1Q15788 1441 aa39.17■■■■□ 3.86
COL13A1-212ENST00000520133 TRIM52Q96A61 297 aa39.15■■■■□ 3.86
COL13A1-212ENST00000520133 SIN3AQ96ST3 1273 aa39.14■■■■□ 3.86
COL13A1-212ENST00000520133 SAMD9LQ8IVG5 1584 aa39.14■■■■□ 3.86
COL13A1-212ENST00000520133 ANKRD30AQ9BXX3 1397 aa39.14■■■■□ 3.86
COL13A1-212ENST00000520133 KCNH8Q96L42 1107 aa39.12■■■■□ 3.85
COL13A1-212ENST00000520133 ARHGAP5Q13017 1502 aa39.12■■■■□ 3.85
COL13A1-212ENST00000520133 NEUROD1Q13562 356 aa39.11■■■■□ 3.85
COL13A1-212ENST00000520133 RSPH4AQ5TD94 716 aa39.08■■■■□ 3.85
COL13A1-212ENST00000520133 TSPY4P0CV99 314 aa39.07■■■■□ 3.85
COL13A1-212ENST00000520133 TSPY10P0CW01 314 aa39.07■■■■□ 3.85
COL13A1-212ENST00000520133 C9orf84Q5VXU9 1444 aa39.07■■■■□ 3.85
COL13A1-212ENST00000520133 MBD5Q9P267 1494 aa39.07■■■■□ 3.84
COL13A1-212ENST00000520133 CCDC141Q6ZP82 1450 aa39.04■■■■□ 3.84
COL13A1-212ENST00000520133 HNRNPMP52272 730 aaKnown RBP eCLIP39.03■■■■□ 3.84
COL13A1-212ENST00000520133 PLEKHH2Q8IVE3 1493 aa39.02■■■■□ 3.84
COL13A1-212ENST00000520133 PLCH2O75038 1416 aa39■■■■□ 3.83
COL13A1-212ENST00000520133 DIEXFQ68CQ4 756 aaKnown RBP39■■■■□ 3.83
COL13A1-212ENST00000520133 MPHOSPH9Q99550 1183 aa39■■■■□ 3.83
COL13A1-212ENST00000520133 WDR7Q9Y4E6 1490 aa38.99■■■■□ 3.83
COL13A1-212ENST00000520133 KIAA1107Q9UPP5 1409 aa38.96■■■■□ 3.83
COL13A1-212ENST00000520133 SYCP2Q9BX26 1530 aa38.96■■■■□ 3.83
COL13A1-212ENST00000520133 DENND4BO75064 1496 aaPredicted RBP38.96■■■■□ 3.83
COL13A1-212ENST00000520133 ANKRD50Q9ULJ7 1429 aa38.93■■■■□ 3.82
COL13A1-212ENST00000520133 TONSLQ96HA7 1378 aa38.91■■■■□ 3.82
COL13A1-212ENST00000520133 EFCAB2Q5VUJ9 269 aa38.91■■■■□ 3.82
COL13A1-212ENST00000520133 ARAP3Q8WWN8 1544 aa38.9■■■■□ 3.82
COL13A1-212ENST00000520133 MAST1Q9Y2H9 1570 aa38.89■■■■□ 3.82
COL13A1-212ENST00000520133 NPM1P06748 294 aaKnown RBP eCLIP38.85■■■■□ 3.81
COL13A1-212ENST00000520133 KIF15Q9NS87 1388 aa38.84■■■■□ 3.81
COL13A1-212ENST00000520133 ASXL2Q76L83 1435 aa38.83■■■■□ 3.81
COL13A1-212ENST00000520133 SLC4A1APQ9BWU0 796 aaKnown RBP38.82■■■■□ 3.81
COL13A1-212ENST00000520133 ABCA9Q8IUA7 1624 aa38.82■■■■□ 3.81
COL13A1-212ENST00000520133 PPP1R15AO75807 674 aaPredicted RBP38.82■■■■□ 3.8
COL13A1-212ENST00000520133 PZPP20742 1482 aa38.79■■■■□ 3.8
COL13A1-212ENST00000520133 ABCC1P33527 1531 aa38.78■■■■□ 3.8
COL13A1-212ENST00000520133 ARHGEF12Q9NZN5 1544 aa38.75■■■■□ 3.79
COL13A1-212ENST00000520133 PLXNC1O60486 1568 aa38.73■■■■□ 3.79
COL13A1-212ENST00000520133 ANKRD30BQ9BXX2 1392 aa38.72■■■■□ 3.79
COL13A1-212ENST00000520133 KDM5DQ9BY66 1539 aa38.69■■■■□ 3.78
COL13A1-212ENST00000520133 FOXD1Q16676 465 aa38.68■■■■□ 3.78
COL13A1-212ENST00000520133 NUP155O75694 1391 aa38.64■■■■□ 3.78
COL13A1-212ENST00000520133 FANCAO15360 1455 aa38.64■■■■□ 3.78
COL13A1-212ENST00000520133 RPRD2Q5VT52 1461 aaKnown RBP38.61■■■■□ 3.77
COL13A1-212ENST00000520133 TRAPPC8Q9Y2L5 1435 aa38.59■■■■□ 3.77
COL13A1-212ENST00000520133 DUOX2Q9NRD8 1548 aa38.59■■■■□ 3.77
COL13A1-212ENST00000520133 PKD2Q13563 968 aa38.56■■■■□ 3.76
COL13A1-212ENST00000520133 RTEL1-TNFRSF6BF6WH68 1400 aa38.53■■■■□ 3.76
COL13A1-212ENST00000520133 UNC13BO14795 1591 aa38.51■■■■□ 3.76
COL13A1-212ENST00000520133 ERBINQ96RT1 1412 aa38.51■■■■□ 3.75
COL13A1-212ENST00000520133 SPAG9O60271 1321 aaKnown RBP38.49■■■■□ 3.75
COL13A1-212ENST00000520133 ADGRL1O94910 1474 aa38.49■■■■□ 3.75
COL13A1-212ENST00000520133 RIMBP3CA6NJZ7 1639 aa38.45■■■■□ 3.75
COL13A1-212ENST00000520133 RIMBP3BA6NNM3 1639 aa38.45■■■■□ 3.75
COL13A1-212ENST00000520133 RIMBP3Q9UFD9 1639 aa38.45■■■■□ 3.75
COL13A1-212ENST00000520133 FAM135AQ9P2D6 1515 aa38.45■■■■□ 3.75
COL13A1-212ENST00000520133 CFAP74Q9C0B2 1584 aa38.45■■■■□ 3.75
COL13A1-212ENST00000520133 ZFYVE16Q7Z3T8 1539 aa38.45■■■■□ 3.75
COL13A1-212ENST00000520133 L3MBTL2Q969R5 705 aa38.44■■■■□ 3.74
COL13A1-212ENST00000520133 AFAP1Q8N556 730 aa38.43■■■■□ 3.74
COL13A1-212ENST00000520133 SCAPERQ9BY12 1400 aa38.43■■■■□ 3.74
COL13A1-212ENST00000520133 CD109Q6YHK3 1445 aa38.42■■■■□ 3.74
COL13A1-212ENST00000520133 TEX14Q8IWB6 1497 aa38.4■■■■□ 3.74
COL13A1-212ENST00000520133 INO80Q9ULG1 1556 aaPredicted RBP38.38■■■■□ 3.73
COL13A1-212ENST00000520133 CYB5RLQ6IPT4 315 aa38.38■■■■□ 3.73
COL13A1-212ENST00000520133 IQGAP3Q86VI3 1631 aa38.37■■■■□ 3.73
COL13A1-212ENST00000520133 ATP7AQ04656 1500 aa38.36■■■■□ 3.73
COL13A1-212ENST00000520133 MAGI2Q86UL8 1455 aa38.35■■■■□ 3.73
COL13A1-212ENST00000520133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.29■■■■□ 3.72
COL13A1-212ENST00000520133 ZNF518AQ6AHZ1 1483 aa38.28■■■■□ 3.72
COL13A1-212ENST00000520133 MIER1Q8N108 512 aa38.26■■■■□ 3.72
COL13A1-212ENST00000520133 MYT1LQ9UL68 1186 aa38.23■■■■□ 3.71
COL13A1-212ENST00000520133 NEO1Q92859 1461 aa38.2■■■■□ 3.71
COL13A1-212ENST00000520133 KIDINS220Q9ULH0 1771 aa38.17■■■■□ 3.7
COL13A1-212ENST00000520133 DEPDC5O75140 1603 aa38.17■■■■□ 3.7
COL13A1-212ENST00000520133 EIF2AK4Q9P2K8 1649 aaKnown RBP38.17■■■■□ 3.7
COL13A1-212ENST00000520133 POGZQ7Z3K3 1410 aa38.16■■■■□ 3.7
COL13A1-212ENST00000520133 GLI2P10070 1586 aa38.15■■■■□ 3.7
COL13A1-212ENST00000520133 MAP3K4Q9Y6R4 1608 aa38.15■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms