RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
PABPC1-213ENST00000519848 HAX1O00165 279 aa14.72□□□□□ -0.05
PABPC1-213ENST00000519848 EEA1Q15075 1411 aa14.71□□□□□ -0.05
PABPC1-213ENST00000519848 TEX14Q8IWB6 1497 aa14.7□□□□□ -0.06
PABPC1-213ENST00000519848 CD109Q6YHK3 1445 aa14.7□□□□□ -0.06
PABPC1-213ENST00000519848 LRRIQ1Q96JM4 1722 aa14.67□□□□□ -0.06
PABPC1-213ENST00000519848 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-213ENST00000519848 KCNH8Q96L42 1107 aa14.67□□□□□ -0.06
PABPC1-213ENST00000519848 CDK13Q14004 1512 aaKnown RBP14.66□□□□□ -0.06
PABPC1-213ENST00000519848 TTC37Q6PGP7 1564 aa14.66□□□□□ -0.06
PABPC1-213ENST00000519848 SIGLEC1Q9BZZ2 1709 aa14.64□□□□□ -0.07
PABPC1-213ENST00000519848 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
PABPC1-213ENST00000519848 EFCAB5A4FU69 1503 aa14.64□□□□□ -0.07
PABPC1-213ENST00000519848 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
PABPC1-213ENST00000519848 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
PABPC1-213ENST00000519848 ARHGAP35Q9NRY4 1499 aa14.63□□□□□ -0.07
PABPC1-213ENST00000519848 ARAP3Q8WWN8 1544 aa14.62□□□□□ -0.07
PABPC1-213ENST00000519848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
PABPC1-213ENST00000519848 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
PABPC1-213ENST00000519848 EVX2Q03828 476 aa14.6□□□□□ -0.07
PABPC1-213ENST00000519848 RICTORQ6R327 1708 aa14.59□□□□□ -0.07
PABPC1-213ENST00000519848 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
PABPC1-213ENST00000519848 KIF14Q15058 1648 aa14.56□□□□□ -0.08
PABPC1-213ENST00000519848 HECW2Q9P2P5 1572 aa14.56□□□□□ -0.08
PABPC1-213ENST00000519848 ADAMTSL3P82987 1691 aa14.54□□□□□ -0.08
PABPC1-213ENST00000519848 PCF11O94913 1555 aaKnown RBP14.53□□□□□ -0.08
PABPC1-213ENST00000519848 ARHGEF40Q8TER5 1519 aa14.53□□□□□ -0.08
PABPC1-213ENST00000519848 NEO1Q92859 1461 aa14.53□□□□□ -0.08
PABPC1-213ENST00000519848 HECW1Q76N89 1606 aa14.52□□□□□ -0.08
PABPC1-213ENST00000519848 RAPGEF3O95398 923 aa14.52□□□□□ -0.09
PABPC1-213ENST00000519848 BCORL1Q5H9F3 1711 aa14.5□□□□□ -0.09
PABPC1-213ENST00000519848 MADDQ8WXG6 1647 aa14.49□□□□□ -0.09
PABPC1-213ENST00000519848 ZMYM4Q5VZL5 1548 aa14.48□□□□□ -0.09
PABPC1-213ENST00000519848 FANCAO15360 1455 aa14.48□□□□□ -0.09
PABPC1-213ENST00000519848 YEATS2Q9ULM3 1422 aa14.48□□□□□ -0.09
PABPC1-213ENST00000519848 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
PABPC1-213ENST00000519848 CFAP74Q9C0B2 1584 aa14.45□□□□□ -0.1
PABPC1-213ENST00000519848 MYO5CQ9NQX4 1742 aa14.45□□□□□ -0.1
PABPC1-213ENST00000519848 CDC42BPBQ9Y5S2 1711 aa14.43□□□□□ -0.1
PABPC1-213ENST00000519848 DENND4BO75064 1496 aaPredicted RBP14.43□□□□□ -0.1
PABPC1-213ENST00000519848 RIMS1Q86UR5 1692 aaKnown RBP14.42□□□□□ -0.1
PABPC1-213ENST00000519848 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
PABPC1-213ENST00000519848 PTPRMP28827 1452 aa14.42□□□□□ -0.1
PABPC1-213ENST00000519848 FMN1Q68DA7 1419 aa14.41□□□□□ -0.1
PABPC1-213ENST00000519848 PHLDB1Q86UU1 1377 aa14.41□□□□□ -0.1
PABPC1-213ENST00000519848 PLCH2O75038 1416 aa14.41□□□□□ -0.1
PABPC1-213ENST00000519848 POGZQ7Z3K3 1410 aa14.41□□□□□ -0.1
PABPC1-213ENST00000519848 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
PABPC1-213ENST00000519848 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
PABPC1-213ENST00000519848 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
PABPC1-213ENST00000519848 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-213ENST00000519848 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
PABPC1-213ENST00000519848 KDM5CP41229 1560 aa14.38□□□□□ -0.11
PABPC1-213ENST00000519848 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
PABPC1-213ENST00000519848 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
PABPC1-213ENST00000519848 SCAPERQ9BY12 1400 aa14.36□□□□□ -0.11
PABPC1-213ENST00000519848 ABCA6Q8N139 1617 aa14.36□□□□□ -0.11
PABPC1-213ENST00000519848 ITSN2Q9NZM3 1697 aa14.35□□□□□ -0.11
PABPC1-213ENST00000519848 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
PABPC1-213ENST00000519848 LMTK3Q96Q04 1460 aa14.34□□□□□ -0.11
PABPC1-213ENST00000519848 ABCC1P33527 1531 aa14.34□□□□□ -0.11
PABPC1-213ENST00000519848 FER1L4A9Z1Z3 1794 aa14.33□□□□□ -0.12
PABPC1-213ENST00000519848 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
PABPC1-213ENST00000519848 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
PABPC1-213ENST00000519848 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
PABPC1-213ENST00000519848 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
PABPC1-213ENST00000519848 CLIP1P30622 1438 aa14.31□□□□□ -0.12
PABPC1-213ENST00000519848 TRAPPC8Q9Y2L5 1435 aa14.31□□□□□ -0.12
PABPC1-213ENST00000519848 CCDC18Q5T9S5 1454 aa14.29□□□□□ -0.12
PABPC1-213ENST00000519848 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
PABPC1-213ENST00000519848 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
PABPC1-213ENST00000519848 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
PABPC1-213ENST00000519848 SYCP2Q9BX26 1530 aa14.25□□□□□ -0.13
PABPC1-213ENST00000519848 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
PABPC1-213ENST00000519848 C9orf84Q5VXU9 1444 aa14.25□□□□□ -0.13
PABPC1-213ENST00000519848 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
PABPC1-213ENST00000519848 AFAP1Q8N556 730 aa14.25□□□□□ -0.13
PABPC1-213ENST00000519848 ATP10AO60312 1499 aa14.25□□□□□ -0.13
PABPC1-213ENST00000519848 ARID4BQ4LE39 1312 aaPredicted RBP14.24□□□□□ -0.13
PABPC1-213ENST00000519848 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
PABPC1-213ENST00000519848 REREQ9P2R6 1566 aa14.24□□□□□ -0.13
PABPC1-213ENST00000519848 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
PABPC1-213ENST00000519848 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-213ENST00000519848 MLH3Q9UHC1 1453 aa14.21□□□□□ -0.13
PABPC1-213ENST00000519848 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
PABPC1-213ENST00000519848 MLECQ14165 292 aa14.21□□□□□ -0.13
PABPC1-213ENST00000519848 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
PABPC1-213ENST00000519848 C3P01024 1663 aa14.2□□□□□ -0.14
PABPC1-213ENST00000519848 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
PABPC1-213ENST00000519848 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
PABPC1-213ENST00000519848 LHX8Q68G74 356 aa14.2□□□□□ -0.14
PABPC1-213ENST00000519848 HSPA2P54652 639 aa14.19□□□□□ -0.14
PABPC1-213ENST00000519848 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
PABPC1-213ENST00000519848 GABBR2O75899 941 aa14.17□□□□□ -0.14
PABPC1-213ENST00000519848 PREX1Q8TCU6 1659 aa14.17□□□□□ -0.14
PABPC1-213ENST00000519848 AGLP35573 1532 aa14.16□□□□□ -0.14
PABPC1-213ENST00000519848 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-213ENST00000519848 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
PABPC1-213ENST00000519848 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
PABPC1-213ENST00000519848 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms