RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-218ENST00000519768 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
CTNNA1-218ENST00000519768 TIE1P35590 1138 aa9.76□□□□□ -0.85
CTNNA1-218ENST00000519768 BMP2KQ9NSY1 1161 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-218ENST00000519768 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
CTNNA1-218ENST00000519768 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
CTNNA1-218ENST00000519768 COLQQ9Y215 455 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-218ENST00000519768 TMEM106CQ9BVX2 250 aa9.72□□□□□ -0.85
CTNNA1-218ENST00000519768 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-218ENST00000519768 SLAIN1Q8ND83 568 aa9.71□□□□□ -0.86
CTNNA1-218ENST00000519768 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.86
CTNNA1-218ENST00000519768 TTLL13PA6NNM8 815 aa9.7□□□□□ -0.86
CTNNA1-218ENST00000519768 SEC24BO95487 1268 aa9.69□□□□□ -0.86
CTNNA1-218ENST00000519768 PEG3Q9GZU2 1588 aa9.69□□□□□ -0.86
CTNNA1-218ENST00000519768 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
CTNNA1-218ENST00000519768 ZNF608Q9ULD9 1512 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-218ENST00000519768 NKX1-1Q15270 411 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-218ENST00000519768 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
CTNNA1-218ENST00000519768 URB2Q14146 1524 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-218ENST00000519768 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-218ENST00000519768 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
CTNNA1-218ENST00000519768 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.87
CTNNA1-218ENST00000519768 CEP164Q9UPV0 1460 aa9.65□□□□□ -0.87
CTNNA1-218ENST00000519768 SOX12O15370 315 aa9.64□□□□□ -0.87
CTNNA1-218ENST00000519768 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
CTNNA1-218ENST00000519768 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
CTNNA1-218ENST00000519768 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
CTNNA1-218ENST00000519768 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-218ENST00000519768 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-218ENST00000519768 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
CTNNA1-218ENST00000519768 MKRN3Q13064 507 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-218ENST00000519768 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-218ENST00000519768 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-218ENST00000519768 MFRPQ9BY79 579 aa9.59□□□□□ -0.87
CTNNA1-218ENST00000519768 NLRP6P59044 892 aa9.58□□□□□ -0.88
CTNNA1-218ENST00000519768 IER5LQ5T953 404 aa9.58□□□□□ -0.88
CTNNA1-218ENST00000519768 MARVELD3Q96A59 401 aa9.58□□□□□ -0.88
CTNNA1-218ENST00000519768 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
CTNNA1-218ENST00000519768 FBXO22Q8NEZ5 403 aa9.56□□□□□ -0.88
CTNNA1-218ENST00000519768 WIZO95785 1651 aa9.55□□□□□ -0.88
CTNNA1-218ENST00000519768 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
CTNNA1-218ENST00000519768 CFTRP13569 1480 aa9.53□□□□□ -0.88
CTNNA1-218ENST00000519768 CHD1O14646 1710 aa9.52□□□□□ -0.89
CTNNA1-218ENST00000519768 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
CTNNA1-218ENST00000519768 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
CTNNA1-218ENST00000519768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.891e-7■□□□□ 9.8
CTNNA1-218ENST00000519768 AQRO60306 1485 aaKnown RBP eCLIP9.52□□□□□ -0.898e-7■■■■■ 28.7
CTNNA1-218ENST00000519768 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-218ENST00000519768 SNPHO15079 494 aa9.5□□□□□ -0.89
CTNNA1-218ENST00000519768 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
CTNNA1-218ENST00000519768 MS4A4AQ96JQ5 239 aa9.5□□□□□ -0.89
CTNNA1-218ENST00000519768 OCEL1Q9H607 264 aa9.5□□□□□ -0.89
CTNNA1-218ENST00000519768 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
CTNNA1-218ENST00000519768 PDCD7Q8N8D1 485 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-218ENST00000519768 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.89
CTNNA1-218ENST00000519768 PLCG2P16885 1265 aa9.46□□□□□ -0.9
CTNNA1-218ENST00000519768 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-218ENST00000519768 PPP1R37O75864 691 aa9.45□□□□□ -0.9
CTNNA1-218ENST00000519768 RSF1Q96T23 1441 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-218ENST00000519768 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
CTNNA1-218ENST00000519768 POTEB3A0JP26 581 aa9.44□□□□□ -0.9
CTNNA1-218ENST00000519768 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
CTNNA1-218ENST00000519768 TOPBP1Q92547 1522 aa9.42□□□□□ -0.9
CTNNA1-218ENST00000519768 EMP3P54852 163 aa9.42□□□□□ -0.9
CTNNA1-218ENST00000519768 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
CTNNA1-218ENST00000519768 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
CTNNA1-218ENST00000519768 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
CTNNA1-218ENST00000519768 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-218ENST00000519768 CLASP1Q7Z460 1538 aa9.39□□□□□ -0.91
CTNNA1-218ENST00000519768 TARBP1Q13395 1621 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-218ENST00000519768 TDRD9Q8NDG6 1382 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-218ENST00000519768 VSIG10Q8N0Z9 540 aa9.38□□□□□ -0.91
CTNNA1-218ENST00000519768 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
CTNNA1-218ENST00000519768 BOLA1Q9Y3E2 137 aa9.37□□□□□ -0.91
CTNNA1-218ENST00000519768 FAM205CA6NFA0 338 aa9.36□□□□□ -0.91
CTNNA1-218ENST00000519768 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-218ENST00000519768 ERCC6L2Q5T890 1561 aa9.35□□□□□ -0.91
CTNNA1-218ENST00000519768 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
CTNNA1-218ENST00000519768 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
CTNNA1-218ENST00000519768 G3V3G9 751 aa9.34□□□□□ -0.91
CTNNA1-218ENST00000519768 CADPS2Q86UW7 1296 aa9.32□□□□□ -0.92
CTNNA1-218ENST00000519768 CHMP7Q8WUX9 453 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-218ENST00000519768 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
CTNNA1-218ENST00000519768 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-218ENST00000519768 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-218ENST00000519768 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
CTNNA1-218ENST00000519768 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
CTNNA1-218ENST00000519768 KIF13AQ9H1H9 1805 aa9.28□□□□□ -0.92
CTNNA1-218ENST00000519768 TOP2AP11388 1531 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-218ENST00000519768 PDE4AP27815 886 aa9.28□□□□□ -0.92
CTNNA1-218ENST00000519768 DNMBPQ6XZF7 1577 aa9.28□□□□□ -0.92
CTNNA1-218ENST00000519768 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
CTNNA1-218ENST00000519768 CRISPLD2Q9H0B8 497 aa9.27□□□□□ -0.93
CTNNA1-218ENST00000519768 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
CTNNA1-218ENST00000519768 SOGA1O94964 1423 aa9.25□□□□□ -0.93
CTNNA1-218ENST00000519768 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
CTNNA1-218ENST00000519768 GPHNQ9NQX3 736 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-218ENST00000519768 SYNJ1O43426 1573 aa9.24□□□□□ -0.93
CTNNA1-218ENST00000519768 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
CTNNA1-218ENST00000519768 ABCC8Q09428 1581 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms