RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 KIF21BO75037 1637 aa11.24□□□□□ -0.61
CTNNA1-217ENST00000519634 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
CTNNA1-217ENST00000519634 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-217ENST00000519634 ABCA8O94911 1581 aa11.22□□□□□ -0.61
CTNNA1-217ENST00000519634 FKBP8Q14318 412 aa11.22□□□□□ -0.61
CTNNA1-217ENST00000519634 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
CTNNA1-217ENST00000519634 ADAMTSL3P82987 1691 aa11.2□□□□□ -0.62
CTNNA1-217ENST00000519634 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
CTNNA1-217ENST00000519634 NEO1Q92859 1461 aa11.19□□□□□ -0.62
CTNNA1-217ENST00000519634 ATP10BO94823 1461 aa11.18□□□□□ -0.62
CTNNA1-217ENST00000519634 HSPA2P54652 639 aa11.17□□□□□ -0.62
CTNNA1-217ENST00000519634 SOCS7O14512 581 aa11.16□□□□□ -0.62
CTNNA1-217ENST00000519634 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
CTNNA1-217ENST00000519634 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.63
CTNNA1-217ENST00000519634 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
CTNNA1-217ENST00000519634 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
CTNNA1-217ENST00000519634 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
CTNNA1-217ENST00000519634 MADDQ8WXG6 1647 aa11.13□□□□□ -0.63
CTNNA1-217ENST00000519634 BCORL1Q5H9F3 1711 aa11.12□□□□□ -0.63
CTNNA1-217ENST00000519634 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
CTNNA1-217ENST00000519634 AKNAQ7Z591 1439 aa11.11□□□□□ -0.63
CTNNA1-217ENST00000519634 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
CTNNA1-217ENST00000519634 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
CTNNA1-217ENST00000519634 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
CTNNA1-217ENST00000519634 DENND4BO75064 1496 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-217ENST00000519634 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
CTNNA1-217ENST00000519634 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
CTNNA1-217ENST00000519634 ARHGEF40Q8TER5 1519 aa11.09□□□□□ -0.63
CTNNA1-217ENST00000519634 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
CTNNA1-217ENST00000519634 FANCAO15360 1455 aa11.09□□□□□ -0.63
CTNNA1-217ENST00000519634 PLEKHD1A6NEE1 506 aa11.07□□□□□ -0.64
CTNNA1-217ENST00000519634 MLECQ14165 292 aa11.06□□□□□ -0.64
CTNNA1-217ENST00000519634 CTTNBP2Q8WZ74 1663 aa11.05□□□□□ -0.64
CTNNA1-217ENST00000519634 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-217ENST00000519634 YEATS2Q9ULM3 1422 aa11.05□□□□□ -0.64
CTNNA1-217ENST00000519634 MAGI2Q86UL8 1455 aa11.05□□□□□ -0.64
CTNNA1-217ENST00000519634 RIMS1Q86UR5 1692 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-217ENST00000519634 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-217ENST00000519634 ZFYVE16Q7Z3T8 1539 aa11.03□□□□□ -0.64
CTNNA1-217ENST00000519634 NUP153P49790 1475 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-217ENST00000519634 PROM2Q8N271 834 aa11.02□□□□□ -0.65
CTNNA1-217ENST00000519634 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
CTNNA1-217ENST00000519634 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
CTNNA1-217ENST00000519634 ZMYM4Q5VZL5 1548 aa11.02□□□□□ -0.65
CTNNA1-217ENST00000519634 RAPGEF6Q8TEU7 1601 aa11□□□□□ -0.65
CTNNA1-217ENST00000519634 CEBPAP49715 358 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-217ENST00000519634 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
CTNNA1-217ENST00000519634 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
CTNNA1-217ENST00000519634 ATP10AO60312 1499 aa10.98□□□□□ -0.65
CTNNA1-217ENST00000519634 TTC37Q6PGP7 1564 aa10.98□□□□□ -0.65
CTNNA1-217ENST00000519634 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
CTNNA1-217ENST00000519634 PTPRTO14522 1441 aa10.97□□□□□ -0.65
CTNNA1-217ENST00000519634 C9orf84Q5VXU9 1444 aa10.97□□□□□ -0.65
CTNNA1-217ENST00000519634 ARHGEF12Q9NZN5 1544 aa10.97□□□□□ -0.65
CTNNA1-217ENST00000519634 SAMD9Q5K651 1589 aa10.97□□□□□ -0.65
CTNNA1-217ENST00000519634 RICTORQ6R327 1708 aa10.97□□□□□ -0.65
CTNNA1-217ENST00000519634 SPATA31D1Q6ZQQ2 1576 aa10.96□□□□□ -0.65
CTNNA1-217ENST00000519634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.96□□□□□ -0.65
CTNNA1-217ENST00000519634 PLCH2O75038 1416 aa10.95□□□□□ -0.66
CTNNA1-217ENST00000519634 EFCAB2Q5VUJ9 269 aa10.95□□□□□ -0.66
CTNNA1-217ENST00000519634 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
CTNNA1-217ENST00000519634 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-217ENST00000519634 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
CTNNA1-217ENST00000519634 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
CTNNA1-217ENST00000519634 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-217ENST00000519634 SIGLEC1Q9BZZ2 1709 aa10.91□□□□□ -0.66
CTNNA1-217ENST00000519634 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
CTNNA1-217ENST00000519634 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
CTNNA1-217ENST00000519634 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
CTNNA1-217ENST00000519634 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
CTNNA1-217ENST00000519634 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-217ENST00000519634 AFAP1Q8N556 730 aa10.88□□□□□ -0.67
CTNNA1-217ENST00000519634 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
CTNNA1-217ENST00000519634 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
CTNNA1-217ENST00000519634 NCOA1Q15788 1441 aa10.87□□□□□ -0.67
CTNNA1-217ENST00000519634 STRCQ7RTU9 1775 aa10.86□□□□□ -0.67
CTNNA1-217ENST00000519634 UBAP1LF5GYI3 381 aa10.86□□□□□ -0.67
CTNNA1-217ENST00000519634 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
CTNNA1-217ENST00000519634 CDK13Q14004 1512 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-217ENST00000519634 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
CTNNA1-217ENST00000519634 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-217ENST00000519634 EEA1Q15075 1411 aa10.84□□□□□ -0.67
CTNNA1-217ENST00000519634 KDM5CP41229 1560 aa10.82□□□□□ -0.68
CTNNA1-217ENST00000519634 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
CTNNA1-217ENST00000519634 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
CTNNA1-217ENST00000519634 AGLP35573 1532 aa10.82□□□□□ -0.68
CTNNA1-217ENST00000519634 NPATQ14207 1427 aa10.82□□□□□ -0.68
CTNNA1-217ENST00000519634 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-217ENST00000519634 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
CTNNA1-217ENST00000519634 PKD2Q13563 968 aa10.81□□□□□ -0.68
CTNNA1-217ENST00000519634 FMN1Q68DA7 1419 aa10.81□□□□□ -0.68
CTNNA1-217ENST00000519634 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
CTNNA1-217ENST00000519634 CLIP1P30622 1438 aa10.8□□□□□ -0.68
CTNNA1-217ENST00000519634 TROQ12816 1431 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-217ENST00000519634 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
CTNNA1-217ENST00000519634 REM2Q8IYK8 340 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-217ENST00000519634 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
CTNNA1-217ENST00000519634 SETD1BQ9UPS6 1966 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-217ENST00000519634 ZMYM3Q14202 1370 aa10.77□□□□□ -0.68
CTNNA1-217ENST00000519634 CAMSAP1Q5T5Y3 1602 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms