RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 ARHGEF12Q9NZN5 1544 aa8.59□□□□□ -1.03
AC055854.1-202ENST00000519624 STRCQ7RTU9 1775 aa8.59□□□□□ -1.03
AC055854.1-202ENST00000519624 C9orf84Q5VXU9 1444 aa8.58□□□□□ -1.04
AC055854.1-202ENST00000519624 PLEKHD1A6NEE1 506 aa8.58□□□□□ -1.04
AC055854.1-202ENST00000519624 RICTORQ6R327 1708 aa8.57□□□□□ -1.04
AC055854.1-202ENST00000519624 MED1Q15648 1581 aaPredicted RBP8.57□□□□□ -1.04
AC055854.1-202ENST00000519624 ATP10AO60312 1499 aa8.57□□□□□ -1.04
AC055854.1-202ENST00000519624 SCAF1Q9H7N4 1312 aaKnown RBP8.56□□□□□ -1.04
AC055854.1-202ENST00000519624 TOM1O60784 492 aa8.56□□□□□ -1.04
AC055854.1-202ENST00000519624 NCOA1Q15788 1441 aa8.55□□□□□ -1.04
AC055854.1-202ENST00000519624 TRAPPC8Q9Y2L5 1435 aa8.55□□□□□ -1.04
AC055854.1-202ENST00000519624 CTTNBP2Q8WZ74 1663 aa8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 HSPA1LP34931 641 aa8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 PKD2Q13563 968 aa8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 SCAPERQ9BY12 1400 aa8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 ZNF335Q9H4Z2 1342 aaPredicted RBP8.53□□□□□ -1.04
AC055854.1-202ENST00000519624 PIP4K2BP78356 416 aa8.52□□□□□ -1.05
AC055854.1-202ENST00000519624 MYT1LQ9UL68 1186 aa8.52□□□□□ -1.05
AC055854.1-202ENST00000519624 SIGLEC1Q9BZZ2 1709 aa8.5□□□□□ -1.05
AC055854.1-202ENST00000519624 CNTLNQ9NXG0 1405 aa8.5□□□□□ -1.05
AC055854.1-202ENST00000519624 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
AC055854.1-202ENST00000519624 EFCAB2Q5VUJ9 269 aa8.49□□□□□ -1.05
AC055854.1-202ENST00000519624 SETD1BQ9UPS6 1966 aaKnown RBP8.49□□□□□ -1.05
AC055854.1-202ENST00000519624 ZNF518AQ6AHZ1 1483 aa8.49□□□□□ -1.05
AC055854.1-202ENST00000519624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
AC055854.1-202ENST00000519624 CAMSAP1Q5T5Y3 1602 aa8.48□□□□□ -1.05
AC055854.1-202ENST00000519624 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
AC055854.1-202ENST00000519624 NCKAP5LQ9HCH0 1330 aa8.48□□□□□ -1.05
AC055854.1-202ENST00000519624 PLCH2O75038 1416 aa8.47□□□□□ -1.05
AC055854.1-202ENST00000519624 NPATQ14207 1427 aa8.47□□□□□ -1.05
AC055854.1-202ENST00000519624 NUP153P49790 1475 aaKnown RBP8.47□□□□□ -1.05
AC055854.1-202ENST00000519624 PLA2R1Q13018 1463 aa8.47□□□□□ -1.05
AC055854.1-202ENST00000519624 PTPRKQ15262 1439 aa8.46□□□□□ -1.05
AC055854.1-202ENST00000519624 AGLP35573 1532 aa8.46□□□□□ -1.05
AC055854.1-202ENST00000519624 REREQ9P2R6 1566 aa8.45□□□□□ -1.06
AC055854.1-202ENST00000519624 CPS1P31327 1500 aa8.44□□□□□ -1.06
AC055854.1-202ENST00000519624 C3P01024 1663 aa8.44□□□□□ -1.06
AC055854.1-202ENST00000519624 PRXQ9BXM0 1461 aa8.44□□□□□ -1.06
AC055854.1-202ENST00000519624 AFAP1Q8N556 730 aa8.42□□□□□ -1.06
AC055854.1-202ENST00000519624 CDK11AQ9UQ88 783 aaPredicted RBP8.42□□□□□ -1.06
AC055854.1-202ENST00000519624 TCOF1Q13428 1488 aaKnown RBP8.42□□□□□ -1.06
AC055854.1-202ENST00000519624 SAMD9Q5K651 1589 aa8.42□□□□□ -1.06
AC055854.1-202ENST00000519624 ZMYM3Q14202 1370 aa8.41□□□□□ -1.06
AC055854.1-202ENST00000519624 KDM5CP41229 1560 aa8.4□□□□□ -1.06
AC055854.1-202ENST00000519624 MLH3Q9UHC1 1453 aa8.4□□□□□ -1.06
AC055854.1-202ENST00000519624 DIP2CQ9Y2E4 1556 aa8.39□□□□□ -1.07
AC055854.1-202ENST00000519624 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
AC055854.1-202ENST00000519624 ARHGAP5Q13017 1502 aa8.38□□□□□ -1.07
AC055854.1-202ENST00000519624 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
AC055854.1-202ENST00000519624 RGS17Q9UGC6 210 aaPredicted RBP8.37□□□□□ -1.07
AC055854.1-202ENST00000519624 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
AC055854.1-202ENST00000519624 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
AC055854.1-202ENST00000519624 RANGAP1P46060 587 aaPredicted RBP8.35□□□□□ -1.07
AC055854.1-202ENST00000519624 SENP3Q9H4L4 574 aaPredicted RBP8.35□□□□□ -1.07
AC055854.1-202ENST00000519624 MYO3AQ8NEV4 1616 aa8.35□□□□□ -1.07
AC055854.1-202ENST00000519624 CLIP1P30622 1438 aa8.35□□□□□ -1.07
AC055854.1-202ENST00000519624 MYO5CQ9NQX4 1742 aa8.34□□□□□ -1.07
AC055854.1-202ENST00000519624 ABCA6Q8N139 1617 aa8.34□□□□□ -1.07
AC055854.1-202ENST00000519624 ANKLE2Q86XL3 938 aa8.34□□□□□ -1.07
AC055854.1-202ENST00000519624 A2ML1A8K2U0 1454 aa8.33□□□□□ -1.08
AC055854.1-202ENST00000519624 POTEAQ6S8J7 498 aa8.33□□□□□ -1.08
AC055854.1-202ENST00000519624 ATP1B4Q9UN42 357 aaPredicted RBP8.33□□□□□ -1.08
AC055854.1-202ENST00000519624 CDK13Q14004 1512 aaKnown RBP8.33□□□□□ -1.08
AC055854.1-202ENST00000519624 KIF14Q15058 1648 aa8.32□□□□□ -1.08
AC055854.1-202ENST00000519624 SUPT6HQ7KZ85 1726 aaKnown RBP8.32□□□□□ -1.08
AC055854.1-202ENST00000519624 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
AC055854.1-202ENST00000519624 TROQ12816 1431 aaPredicted RBP8.3□□□□□ -1.08
AC055854.1-202ENST00000519624 GGT6Q6P531 493 aa8.3□□□□□ -1.08
AC055854.1-202ENST00000519624 CSRNP3Q8WYN3 585 aa8.3□□□□□ -1.08
AC055854.1-202ENST00000519624 SPAG9O60271 1321 aaKnown RBP8.29□□□□□ -1.08
AC055854.1-202ENST00000519624 RNF17Q9BXT8 1623 aaKnown RBP8.29□□□□□ -1.08
AC055854.1-202ENST00000519624 DNMT1P26358 1616 aaKnown RBP8.29□□□□□ -1.08
AC055854.1-202ENST00000519624 ABCC1P33527 1531 aa8.29□□□□□ -1.08
AC055854.1-202ENST00000519624 NPHP4O75161 1426 aaPredicted RBP8.29□□□□□ -1.08
AC055854.1-202ENST00000519624 FMN1Q68DA7 1419 aa8.29□□□□□ -1.08
AC055854.1-202ENST00000519624 FOXD1Q16676 465 aa8.28□□□□□ -1.08
AC055854.1-202ENST00000519624 UPF1Q92900 1129 aaKnown RBP eCLIP8.28□□□□□ -1.08
AC055854.1-202ENST00000519624 ALKQ9UM73 1620 aa8.28□□□□□ -1.08
AC055854.1-202ENST00000519624 VWDEQ8N2E2 1590 aa8.27□□□□□ -1.09
AC055854.1-202ENST00000519624 TNRQ92752 1358 aa8.27□□□□□ -1.09
AC055854.1-202ENST00000519624 SYNMO15061 1565 aa8.27□□□□□ -1.09
AC055854.1-202ENST00000519624 NEURL4Q96JN8 1562 aa8.27□□□□□ -1.09
AC055854.1-202ENST00000519624 MED14O60244 1454 aa8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 LRRC7Q96NW7 1537 aa8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 FAM135AQ9P2D6 1515 aa8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 CLTCQ00610 1675 aaKnown RBP8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 FAM135BQ49AJ0 1406 aa8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 A2MP01023 1474 aa8.26□□□□□ -1.09
AC055854.1-202ENST00000519624 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
AC055854.1-202ENST00000519624 ZNF772Q68DY9 489 aaPredicted RBP8.24□□□□□ -1.09
AC055854.1-202ENST00000519624 DEPDC5O75140 1603 aa8.24□□□□□ -1.09
AC055854.1-202ENST00000519624 NLRP1Q9C000 1473 aa8.24□□□□□ -1.09
AC055854.1-202ENST00000519624 SAMD9LQ8IVG5 1584 aa8.23□□□□□ -1.09
AC055854.1-202ENST00000519624 ZNF777Q9ULD5 760 aaPredicted RBP8.23□□□□□ -1.09
AC055854.1-202ENST00000519624 ITSN2Q9NZM3 1697 aa8.23□□□□□ -1.09
AC055854.1-202ENST00000519624 UGGT1Q9NYU2 1555 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms