RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUDCD1-203ENST00000519607 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.11
NUDCD1-203ENST00000519607 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
NUDCD1-203ENST00000519607 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
NUDCD1-203ENST00000519607 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
NUDCD1-203ENST00000519607 DISP1Q96F81 1524 aa15.69■□□□□ 0.1
NUDCD1-203ENST00000519607 ABCC5O15440 1437 aa15.69■□□□□ 0.1
NUDCD1-203ENST00000519607 ANKRD30BQ9BXX2 1392 aa15.69■□□□□ 0.1
NUDCD1-203ENST00000519607 NUP153P49790 1475 aaKnown RBP15.68■□□□□ 0.1
NUDCD1-203ENST00000519607 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
NUDCD1-203ENST00000519607 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
NUDCD1-203ENST00000519607 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
NUDCD1-203ENST00000519607 FOXD1Q16676 465 aa15.66■□□□□ 0.1
NUDCD1-203ENST00000519607 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
NUDCD1-203ENST00000519607 NCOA1Q15788 1441 aa15.66■□□□□ 0.1
NUDCD1-203ENST00000519607 CCDC7Q96M83 1385 aa15.65■□□□□ 0.1
NUDCD1-203ENST00000519607 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
NUDCD1-203ENST00000519607 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
NUDCD1-203ENST00000519607 TROQ12816 1431 aaPredicted RBP15.63■□□□□ 0.09
NUDCD1-203ENST00000519607 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
NUDCD1-203ENST00000519607 TEX14Q8IWB6 1497 aa15.62■□□□□ 0.09
NUDCD1-203ENST00000519607 ZNF644Q9H582 1327 aaPredicted RBP15.62■□□□□ 0.09
NUDCD1-203ENST00000519607 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
NUDCD1-203ENST00000519607 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
NUDCD1-203ENST00000519607 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
NUDCD1-203ENST00000519607 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
NUDCD1-203ENST00000519607 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
NUDCD1-203ENST00000519607 MAGI1Q96QZ7 1491 aaPredicted RBP15.6■□□□□ 0.09
NUDCD1-203ENST00000519607 NBPF8Q3BBV2 869 aa15.6■□□□□ 0.09
NUDCD1-203ENST00000519607 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
NUDCD1-203ENST00000519607 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.09
NUDCD1-203ENST00000519607 MRS2Q9HD23 443 aa15.58■□□□□ 0.08
NUDCD1-203ENST00000519607 RBM19Q9Y4C8 960 aaKnown RBP15.58■□□□□ 0.08
NUDCD1-203ENST00000519607 CARMIL2Q6F5E8 1435 aa15.58■□□□□ 0.08
NUDCD1-203ENST00000519607 PRG4Q92954 1404 aaPredicted RBP15.57■□□□□ 0.08
NUDCD1-203ENST00000519607 C11orf95C9JLR9 678 aaPredicted RBP15.57■□□□□ 0.08
NUDCD1-203ENST00000519607 SPATA31E1Q6ZUB1 1445 aa15.57■□□□□ 0.08
NUDCD1-203ENST00000519607 ANKRD30AQ9BXX3 1397 aa15.56■□□□□ 0.08
NUDCD1-203ENST00000519607 GPATCH8Q9UKJ3 1502 aaKnown RBP15.56■□□□□ 0.08
NUDCD1-203ENST00000519607 ADGRL2O95490 1459 aa15.56■□□□□ 0.08
NUDCD1-203ENST00000519607 PZPP20742 1482 aa15.56■□□□□ 0.08
NUDCD1-203ENST00000519607 CROCC2H7BZ55 1655 aa15.55■□□□□ 0.08
NUDCD1-203ENST00000519607 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
NUDCD1-203ENST00000519607 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
NUDCD1-203ENST00000519607 SYNJ2O15056 1496 aa15.55■□□□□ 0.08
NUDCD1-203ENST00000519607 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
NUDCD1-203ENST00000519607 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
NUDCD1-203ENST00000519607 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
NUDCD1-203ENST00000519607 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
NUDCD1-203ENST00000519607 CEP170Q5SW79 1584 aa15.52■□□□□ 0.08
NUDCD1-203ENST00000519607 CCDC184Q52MB2 194 aa15.52■□□□□ 0.07
NUDCD1-203ENST00000519607 KIF14Q15058 1648 aa15.51■□□□□ 0.07
NUDCD1-203ENST00000519607 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
NUDCD1-203ENST00000519607 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
NUDCD1-203ENST00000519607 PPP4R2Q9NY27 417 aa15.51■□□□□ 0.07
NUDCD1-203ENST00000519607 PKD2Q13563 968 aa15.5■□□□□ 0.07
NUDCD1-203ENST00000519607 FBLN2P98095 1184 aa15.5■□□□□ 0.07
NUDCD1-203ENST00000519607 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
NUDCD1-203ENST00000519607 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
NUDCD1-203ENST00000519607 MBD5Q9P267 1494 aa15.49■□□□□ 0.07
NUDCD1-203ENST00000519607 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
NUDCD1-203ENST00000519607 USP47Q96K76 1375 aa15.48■□□□□ 0.07
NUDCD1-203ENST00000519607 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
NUDCD1-203ENST00000519607 CDC42BPAQ5VT25 1732 aa15.46■□□□□ 0.07
NUDCD1-203ENST00000519607 TSPY4P0CV99 314 aa15.46■□□□□ 0.07
NUDCD1-203ENST00000519607 TSPY10P0CW01 314 aa15.46■□□□□ 0.07
NUDCD1-203ENST00000519607 ZNF326Q5BKZ1 582 aaKnown RBP15.46■□□□□ 0.07
NUDCD1-203ENST00000519607 NUP160Q12769 1436 aa15.46■□□□□ 0.07
NUDCD1-203ENST00000519607 ROCK2O75116 1388 aaKnown RBP15.45■□□□□ 0.06
NUDCD1-203ENST00000519607 NUP155O75694 1391 aa15.44■□□□□ 0.06
NUDCD1-203ENST00000519607 KDM5CP41229 1560 aa15.43■□□□□ 0.06
NUDCD1-203ENST00000519607 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
NUDCD1-203ENST00000519607 UHRF1BP1Q6BDS2 1440 aa15.43■□□□□ 0.06
NUDCD1-203ENST00000519607 POLR3GLQ9BT43 218 aa15.43■□□□□ 0.06
NUDCD1-203ENST00000519607 ABCA8O94911 1581 aa15.43■□□□□ 0.06
NUDCD1-203ENST00000519607 ARHGEF12Q9NZN5 1544 aa15.42■□□□□ 0.06
NUDCD1-203ENST00000519607 BCORL1Q5H9F3 1711 aa15.41■□□□□ 0.06
NUDCD1-203ENST00000519607 DHX29Q7Z478 1369 aaKnown RBP15.41■□□□□ 0.06
NUDCD1-203ENST00000519607 ABCC10Q5T3U5 1492 aa15.41■□□□□ 0.06
NUDCD1-203ENST00000519607 RALGAPBQ86X10 1494 aa15.41■□□□□ 0.06
NUDCD1-203ENST00000519607 FANCIQ9NVI1 1328 aa15.4■□□□□ 0.06
NUDCD1-203ENST00000519607 KDM5DQ9BY66 1539 aa15.4■□□□□ 0.06
NUDCD1-203ENST00000519607 ATP10BO94823 1461 aa15.4■□□□□ 0.06
NUDCD1-203ENST00000519607 CARD11Q9BXL7 1154 aa15.4■□□□□ 0.06
NUDCD1-203ENST00000519607 ARHGEF5Q12774 1597 aa15.38■□□□□ 0.05
NUDCD1-203ENST00000519607 SMG6Q86US8 1419 aaKnown RBP15.37■□□□□ 0.05
NUDCD1-203ENST00000519607 RSPH4AQ5TD94 716 aa15.37■□□□□ 0.05
NUDCD1-203ENST00000519607 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
NUDCD1-203ENST00000519607 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
NUDCD1-203ENST00000519607 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
NUDCD1-203ENST00000519607 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
NUDCD1-203ENST00000519607 PTPRGP23470 1445 aa15.33■□□□□ 0.05
NUDCD1-203ENST00000519607 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.05
NUDCD1-203ENST00000519607 ERICH6Q7L0X2 663 aa15.33■□□□□ 0.05
NUDCD1-203ENST00000519607 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.043e-11■■■■■ 38.2
NUDCD1-203ENST00000519607 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
NUDCD1-203ENST00000519607 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
NUDCD1-203ENST00000519607 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
NUDCD1-203ENST00000519607 CCDC141Q6ZP82 1450 aa15.32■□□□□ 0.04
NUDCD1-203ENST00000519607 RALBP1Q15311 655 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms