RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
TRAPPC9-204ENST00000518723 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
TRAPPC9-204ENST00000518723 FER1L4A9Z1Z3 1794 aa20.73■□□□□ 0.91
TRAPPC9-204ENST00000518723 MLECQ14165 292 aa20.73■□□□□ 0.91
TRAPPC9-204ENST00000518723 ATP10AO60312 1499 aa20.73■□□□□ 0.91
TRAPPC9-204ENST00000518723 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
TRAPPC9-204ENST00000518723 EFCAB2Q5VUJ9 269 aa20.69■□□□□ 0.9
TRAPPC9-204ENST00000518723 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
TRAPPC9-204ENST00000518723 PREX1Q8TCU6 1659 aa20.65■□□□□ 0.9
TRAPPC9-204ENST00000518723 ZNF518AQ6AHZ1 1483 aa20.64■□□□□ 0.89
TRAPPC9-204ENST00000518723 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC9-204ENST00000518723 MYO5CQ9NQX4 1742 aa20.63■□□□□ 0.89
TRAPPC9-204ENST00000518723 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
TRAPPC9-204ENST00000518723 KDM5CP41229 1560 aa20.62■□□□□ 0.89
TRAPPC9-204ENST00000518723 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC9-204ENST00000518723 TROQ12816 1431 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-204ENST00000518723 KIF14Q15058 1648 aa20.59■□□□□ 0.89
TRAPPC9-204ENST00000518723 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
TRAPPC9-204ENST00000518723 AFAP1Q8N556 730 aa20.58■□□□□ 0.89
TRAPPC9-204ENST00000518723 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-204ENST00000518723 REREQ9P2R6 1566 aa20.58■□□□□ 0.88
TRAPPC9-204ENST00000518723 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
TRAPPC9-204ENST00000518723 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
TRAPPC9-204ENST00000518723 STRCQ7RTU9 1775 aa20.56■□□□□ 0.88
TRAPPC9-204ENST00000518723 CLIP1P30622 1438 aa20.55■□□□□ 0.88
TRAPPC9-204ENST00000518723 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
TRAPPC9-204ENST00000518723 MLH3Q9UHC1 1453 aa20.54■□□□□ 0.88
TRAPPC9-204ENST00000518723 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-204ENST00000518723 SETD1BQ9UPS6 1966 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-204ENST00000518723 PTPRTO14522 1441 aa20.53■□□□□ 0.88
TRAPPC9-204ENST00000518723 AGLP35573 1532 aa20.51■□□□□ 0.87
TRAPPC9-204ENST00000518723 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
TRAPPC9-204ENST00000518723 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
TRAPPC9-204ENST00000518723 DISP3Q9P2K9 1392 aa20.48■□□□□ 0.87
TRAPPC9-204ENST00000518723 TRAPPC8Q9Y2L5 1435 aa20.47■□□□□ 0.87
TRAPPC9-204ENST00000518723 C3P01024 1663 aa20.46■□□□□ 0.87
TRAPPC9-204ENST00000518723 ABCC1P33527 1531 aa20.46■□□□□ 0.87
TRAPPC9-204ENST00000518723 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
TRAPPC9-204ENST00000518723 ILDR2Q71H61 639 aa20.45■□□□□ 0.86
TRAPPC9-204ENST00000518723 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
TRAPPC9-204ENST00000518723 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
TRAPPC9-204ENST00000518723 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
TRAPPC9-204ENST00000518723 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
TRAPPC9-204ENST00000518723 LRRIQ1Q96JM4 1722 aa20.43■□□□□ 0.86
TRAPPC9-204ENST00000518723 SOCS7O14512 581 aa20.42■□□□□ 0.86
TRAPPC9-204ENST00000518723 NCOA1Q15788 1441 aa20.42■□□□□ 0.86
TRAPPC9-204ENST00000518723 IQSEC2Q5JU85 1478 aa20.42■□□□□ 0.86
TRAPPC9-204ENST00000518723 LTBP4Q8N2S1 1624 aa20.42■□□□□ 0.86
TRAPPC9-204ENST00000518723 CCDC18Q5T9S5 1454 aa20.41■□□□□ 0.86
TRAPPC9-204ENST00000518723 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.86
TRAPPC9-204ENST00000518723 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
TRAPPC9-204ENST00000518723 NPATQ14207 1427 aa20.38■□□□□ 0.85
TRAPPC9-204ENST00000518723 KIDINS220Q9ULH0 1771 aa20.38■□□□□ 0.85
TRAPPC9-204ENST00000518723 SPATA31D1Q6ZQQ2 1576 aa20.35■□□□□ 0.85
TRAPPC9-204ENST00000518723 SAMD9LQ8IVG5 1584 aa20.34■□□□□ 0.85
TRAPPC9-204ENST00000518723 MROH2AA6NES4 1674 aa20.32■□□□□ 0.84
TRAPPC9-204ENST00000518723 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
TRAPPC9-204ENST00000518723 ZMYM3Q14202 1370 aa20.31■□□□□ 0.84
TRAPPC9-204ENST00000518723 CAMSAP1Q5T5Y3 1602 aa20.31■□□□□ 0.84
TRAPPC9-204ENST00000518723 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-204ENST00000518723 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
TRAPPC9-204ENST00000518723 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
TRAPPC9-204ENST00000518723 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-204ENST00000518723 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.83
TRAPPC9-204ENST00000518723 PLA2R1Q13018 1463 aa20.25■□□□□ 0.83
TRAPPC9-204ENST00000518723 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
TRAPPC9-204ENST00000518723 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC9-204ENST00000518723 PLXNC1O60486 1568 aa20.25■□□□□ 0.83
TRAPPC9-204ENST00000518723 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
TRAPPC9-204ENST00000518723 PKD2Q13563 968 aa20.24■□□□□ 0.83
TRAPPC9-204ENST00000518723 NCKAP5LQ9HCH0 1330 aa20.24■□□□□ 0.83
TRAPPC9-204ENST00000518723 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
TRAPPC9-204ENST00000518723 ATP7AQ04656 1500 aa20.23■□□□□ 0.83
TRAPPC9-204ENST00000518723 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
TRAPPC9-204ENST00000518723 ZNF335Q9H4Z2 1342 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC9-204ENST00000518723 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC9-204ENST00000518723 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
TRAPPC9-204ENST00000518723 A2MP01023 1474 aa20.22■□□□□ 0.83
TRAPPC9-204ENST00000518723 INO80Q9ULG1 1556 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC9-204ENST00000518723 MYO3AQ8NEV4 1616 aa20.2■□□□□ 0.82
TRAPPC9-204ENST00000518723 SUPT6HQ7KZ85 1726 aaKnown RBP20.2■□□□□ 0.82
TRAPPC9-204ENST00000518723 CEP170BQ9Y4F5 1589 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC9-204ENST00000518723 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-204ENST00000518723 CFDP1Q9UEE9 299 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC9-204ENST00000518723 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
TRAPPC9-204ENST00000518723 UBAP1LF5GYI3 381 aa20.18■□□□□ 0.82
TRAPPC9-204ENST00000518723 CCNB3Q8WWL7 1395 aa20.16■□□□□ 0.82
TRAPPC9-204ENST00000518723 GGT6Q6P531 493 aa20.15■□□□□ 0.82
TRAPPC9-204ENST00000518723 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
TRAPPC9-204ENST00000518723 ADGBQ8N7X0 1667 aa20.1■□□□□ 0.81
TRAPPC9-204ENST00000518723 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
TRAPPC9-204ENST00000518723 MBD5Q9P267 1494 aa20.09■□□□□ 0.81
TRAPPC9-204ENST00000518723 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
TRAPPC9-204ENST00000518723 DNMT1P26358 1616 aaKnown RBP20.08■□□□□ 0.8
TRAPPC9-204ENST00000518723 DHX29Q7Z478 1369 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-204ENST00000518723 ZNF644Q9H582 1327 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC9-204ENST00000518723 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
TRAPPC9-204ENST00000518723 CPS1P31327 1500 aa20.03■□□□□ 0.8
TRAPPC9-204ENST00000518723 FAM135AQ9P2D6 1515 aa20.03■□□□□ 0.8
TRAPPC9-204ENST00000518723 TNRQ92752 1358 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms