RNA–Protein interactions for RNA: ENST00000518592.5

CLVS1-203, Transcript of clavesin 1, humanhuman

TSL 1 (best) BASIC

Gene CLVS1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-203ENST00000518592 NCOA1Q15788 1441 aa8.31□□□□□ -1.08
CLVS1-203ENST00000518592 SAMD9Q5K651 1589 aa8.31□□□□□ -1.08
CLVS1-203ENST00000518592 URB2Q14146 1524 aaKnown RBP8.31□□□□□ -1.08
CLVS1-203ENST00000518592 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
CLVS1-203ENST00000518592 SLC4A1APQ9BWU0 796 aaKnown RBP8.31□□□□□ -1.08
CLVS1-203ENST00000518592 ZNF644Q9H582 1327 aaPredicted RBP8.3□□□□□ -1.08
CLVS1-203ENST00000518592 CDK13Q14004 1512 aaKnown RBP8.29□□□□□ -1.08
CLVS1-203ENST00000518592 NBR1Q14596 966 aa8.29□□□□□ -1.08
CLVS1-203ENST00000518592 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
CLVS1-203ENST00000518592 ARHGEF11O15085 1522 aa8.28□□□□□ -1.08
CLVS1-203ENST00000518592 HECW1Q76N89 1606 aa8.28□□□□□ -1.08
CLVS1-203ENST00000518592 ANKRD30BQ9BXX2 1392 aa8.28□□□□□ -1.08
CLVS1-203ENST00000518592 TCOF1Q13428 1488 aaKnown RBP8.28□□□□□ -1.08
CLVS1-203ENST00000518592 PAK3O75914 559 aaPredicted RBP8.28□□□□□ -1.08
CLVS1-203ENST00000518592 DNAJC5BQ9UF47 199 aa8.27□□□□□ -1.09
CLVS1-203ENST00000518592 EPRSP07814 1512 aaKnown RBP8.27□□□□□ -1.09
CLVS1-203ENST00000518592 THOC2Q8NI27 1593 aaKnown RBP8.26□□□□□ -1.09
CLVS1-203ENST00000518592 GCC2Q8IWJ2 1684 aa8.26□□□□□ -1.09
CLVS1-203ENST00000518592 DEKP35659 375 aaKnown RBP8.26□□□□□ -1.09
CLVS1-203ENST00000518592 CCDC136Q96JN2 1154 aa8.26□□□□□ -1.09
CLVS1-203ENST00000518592 RPRD2Q5VT52 1461 aaKnown RBP8.26□□□□□ -1.09
CLVS1-203ENST00000518592 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
CLVS1-203ENST00000518592 TEX14Q8IWB6 1497 aa8.25□□□□□ -1.09
CLVS1-203ENST00000518592 NOP58Q9Y2X3 529 aaKnown RBP8.25□□□□□ -1.09
CLVS1-203ENST00000518592 LAMC3Q9Y6N6 1575 aa8.25□□□□□ -1.09
CLVS1-203ENST00000518592 SPATA31E1Q6ZUB1 1445 aa8.25□□□□□ -1.09
CLVS1-203ENST00000518592 MIA2Q96PC5 1412 aa8.24□□□□□ -1.09
CLVS1-203ENST00000518592 ZNF777Q9ULD5 760 aaPredicted RBP8.24□□□□□ -1.09
CLVS1-203ENST00000518592 DAPK1P53355 1430 aa8.24□□□□□ -1.09
CLVS1-203ENST00000518592 NUDCQ9Y266 331 aa8.24□□□□□ -1.09
CLVS1-203ENST00000518592 ABCC5O15440 1437 aa8.23□□□□□ -1.09
CLVS1-203ENST00000518592 DHX29Q7Z478 1369 aaKnown RBP8.22□□□□□ -1.09
CLVS1-203ENST00000518592 USP47Q96K76 1375 aa8.22□□□□□ -1.09
CLVS1-203ENST00000518592 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
CLVS1-203ENST00000518592 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
CLVS1-203ENST00000518592 SMG6Q86US8 1419 aaKnown RBP8.22□□□□□ -1.09
CLVS1-203ENST00000518592 PKD2Q13563 968 aa8.21□□□□□ -1.1
CLVS1-203ENST00000518592 ANP32AP39687 249 aaKnown RBP8.2□□□□□ -1.1
CLVS1-203ENST00000518592 KDM2AQ9Y2K7 1162 aa8.2□□□□□ -1.1
CLVS1-203ENST00000518592 ROCK1Q13464 1354 aa8.2□□□□□ -1.1
CLVS1-203ENST00000518592 IQGAP2Q13576 1575 aa8.2□□□□□ -1.1
CLVS1-203ENST00000518592 NPM2Q86SE8 214 aaKnown RBP8.2□□□□□ -1.1
CLVS1-203ENST00000518592 PNISRQ8TF01 805 aaKnown RBP8.2□□□□□ -1.1
CLVS1-203ENST00000518592 CFDP1Q9UEE9 299 aaPredicted RBP8.2□□□□□ -1.1
CLVS1-203ENST00000518592 WDR62O43379 1518 aa8.19□□□□□ -1.1
CLVS1-203ENST00000518592 PDS5BQ9NTI5 1447 aa8.19□□□□□ -1.1
CLVS1-203ENST00000518592 CARD11Q9BXL7 1154 aa8.18□□□□□ -1.1
CLVS1-203ENST00000518592 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
CLVS1-203ENST00000518592 PZPP20742 1482 aa8.18□□□□□ -1.1
CLVS1-203ENST00000518592 IPO9Q96P70 1041 aaKnown RBP8.18□□□□□ -1.1
CLVS1-203ENST00000518592 ZBTB47Q9UFB7 747 aaPredicted RBP8.18□□□□□ -1.1
CLVS1-203ENST00000518592 RNF123Q5XPI4 1314 aa8.18□□□□□ -1.1
CLVS1-203ENST00000518592 KIF21AQ7Z4S6 1674 aa8.17□□□□□ -1.1
CLVS1-203ENST00000518592 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
CLVS1-203ENST00000518592 PRG4Q92954 1404 aaPredicted RBP8.17□□□□□ -1.1
CLVS1-203ENST00000518592 ST20-MTHFSA0A0A6YYL1 179 aa8.16□□□□□ -1.1
CLVS1-203ENST00000518592 EXOC6Q8TAG9 804 aa8.16□□□□□ -1.1
CLVS1-203ENST00000518592 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
CLVS1-203ENST00000518592 NUP153P49790 1475 aaKnown RBP8.16□□□□□ -1.1
CLVS1-203ENST00000518592 TARBP1Q13395 1621 aaKnown RBP8.16□□□□□ -1.1
CLVS1-203ENST00000518592 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
CLVS1-203ENST00000518592 KIAA1107Q9UPP5 1409 aa8.15□□□□□ -1.1
CLVS1-203ENST00000518592 DCAF11Q8TEB1 546 aa8.14□□□□□ -1.11
CLVS1-203ENST00000518592 MBD5Q9P267 1494 aa8.14□□□□□ -1.11
CLVS1-203ENST00000518592 CAMSAP2Q08AD1 1489 aa8.14□□□□□ -1.11
CLVS1-203ENST00000518592 NUP155O75694 1391 aa8.14□□□□□ -1.11
CLVS1-203ENST00000518592 RRP1P56182 461 aaKnown RBP8.14□□□□□ -1.11
CLVS1-203ENST00000518592 SKAP1Q86WV1 359 aa8.13□□□□□ -1.11
CLVS1-203ENST00000518592 ADAMTS12P58397 1594 aa8.13□□□□□ -1.11
CLVS1-203ENST00000518592 RCAN3Q9UKA8 241 aa8.13□□□□□ -1.11
CLVS1-203ENST00000518592 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
CLVS1-203ENST00000518592 POLR1AO95602 1720 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-203ENST00000518592 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
CLVS1-203ENST00000518592 PBRM1Q86U86 1689 aa8.12□□□□□ -1.11
CLVS1-203ENST00000518592 MYBBP1AQ9BQG0 1328 aaKnown RBP8.12□□□□□ -1.11
CLVS1-203ENST00000518592 PLIN1O60240 522 aa8.12□□□□□ -1.11
CLVS1-203ENST00000518592 FBLN2P98095 1184 aa8.12□□□□□ -1.11
CLVS1-203ENST00000518592 CDCA7LQ96GN5 454 aa8.12□□□□□ -1.11
CLVS1-203ENST00000518592 DISP1Q96F81 1524 aa8.12□□□□□ -1.11
CLVS1-203ENST00000518592 ZNF608Q9ULD9 1512 aaPredicted RBP8.12□□□□□ -1.11
CLVS1-203ENST00000518592 ANKRD50Q9ULJ7 1429 aa8.12□□□□□ -1.11
CLVS1-203ENST00000518592 KDM5CP41229 1560 aa8.11□□□□□ -1.11
CLVS1-203ENST00000518592 ANKRD30AQ9BXX3 1397 aa8.11□□□□□ -1.11
CLVS1-203ENST00000518592 ROCK2O75116 1388 aaKnown RBP8.11□□□□□ -1.11
CLVS1-203ENST00000518592 ARID4BQ4LE39 1312 aaPredicted RBP8.11□□□□□ -1.11
CLVS1-203ENST00000518592 PLB1Q6P1J6 1458 aa8.11□□□□□ -1.11
CLVS1-203ENST00000518592 RGL3Q3MIN7 710 aa8.11□□□□□ -1.11
CLVS1-203ENST00000518592 TROQ12816 1431 aaPredicted RBP8.11□□□□□ -1.11
CLVS1-203ENST00000518592 GPATCH8Q9UKJ3 1502 aaKnown RBP8.11□□□□□ -1.11
CLVS1-203ENST00000518592 PDE4AP27815 886 aa8.1□□□□□ -1.11
CLVS1-203ENST00000518592 LRPPRCP42704 1394 aaKnown RBP8.1□□□□□ -1.11
CLVS1-203ENST00000518592 KIAA0556O60303 1618 aa8.1□□□□□ -1.11
CLVS1-203ENST00000518592 RALBP1Q15311 655 aa8.1□□□□□ -1.11
CLVS1-203ENST00000518592 CC2D1BQ5T0F9 858 aaKnown RBP8.1□□□□□ -1.11
CLVS1-203ENST00000518592 BRD4O60885 1362 aaPredicted RBP8.1□□□□□ -1.11
CLVS1-203ENST00000518592 KIF14Q15058 1648 aa8.1□□□□□ -1.11
CLVS1-203ENST00000518592 RAPGEF6Q8TEU7 1601 aa8.09□□□□□ -1.11
CLVS1-203ENST00000518592 RALGAPBQ86X10 1494 aa8.09□□□□□ -1.11
CLVS1-203ENST00000518592 KIAA0586Q9BVV6 1533 aa8.09□□□□□ -1.11
CLVS1-203ENST00000518592 HNRNPMP52272 730 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms