RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 ITSN2Q9NZM3 1697 aa15.73■□□□□ 0.11
CPEB4-203ENST00000517880 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
CPEB4-203ENST00000517880 PTPRKQ15262 1439 aa15.72■□□□□ 0.11
CPEB4-203ENST00000517880 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
CPEB4-203ENST00000517880 NAIPQ13075 1403 aa15.71■□□□□ 0.1
CPEB4-203ENST00000517880 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
CPEB4-203ENST00000517880 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
CPEB4-203ENST00000517880 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
CPEB4-203ENST00000517880 ROCK1Q13464 1354 aa15.69■□□□□ 0.1
CPEB4-203ENST00000517880 GPATCH8Q9UKJ3 1502 aaKnown RBP15.67■□□□□ 0.1
CPEB4-203ENST00000517880 KIF14Q15058 1648 aa15.67■□□□□ 0.1
CPEB4-203ENST00000517880 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
CPEB4-203ENST00000517880 CFDP1Q9UEE9 299 aaPredicted RBP15.67■□□□□ 0.1
CPEB4-203ENST00000517880 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
CPEB4-203ENST00000517880 GCC2Q8IWJ2 1684 aa15.66■□□□□ 0.1
CPEB4-203ENST00000517880 DNMT1P26358 1616 aaKnown RBP15.66■□□□□ 0.1
CPEB4-203ENST00000517880 DAPK1P53355 1430 aa15.65■□□□□ 0.1
CPEB4-203ENST00000517880 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
CPEB4-203ENST00000517880 ABCC10Q5T3U5 1492 aa15.64■□□□□ 0.09
CPEB4-203ENST00000517880 ABCC2Q92887 1545 aa15.63■□□□□ 0.09
CPEB4-203ENST00000517880 ABCC5O15440 1437 aa15.63■□□□□ 0.09
CPEB4-203ENST00000517880 CAMSAP2Q08AD1 1489 aa15.61■□□□□ 0.09
CPEB4-203ENST00000517880 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
CPEB4-203ENST00000517880 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
CPEB4-203ENST00000517880 CHIC2Q9UKJ5 165 aa15.6■□□□□ 0.09
CPEB4-203ENST00000517880 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
CPEB4-203ENST00000517880 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
CPEB4-203ENST00000517880 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
CPEB4-203ENST00000517880 DIEXFQ68CQ4 756 aaKnown RBP15.58■□□□□ 0.08
CPEB4-203ENST00000517880 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
CPEB4-203ENST00000517880 ADGRL2O95490 1459 aa15.55■□□□□ 0.08
CPEB4-203ENST00000517880 ADGBQ8N7X0 1667 aa15.55■□□□□ 0.08
CPEB4-203ENST00000517880 KDM5BQ9UGL1 1544 aa15.54■□□□□ 0.08
CPEB4-203ENST00000517880 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
CPEB4-203ENST00000517880 ANKRD30AQ9BXX3 1397 aa15.53■□□□□ 0.08
CPEB4-203ENST00000517880 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
CPEB4-203ENST00000517880 CROCC2H7BZ55 1655 aa15.53■□□□□ 0.08
CPEB4-203ENST00000517880 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
CPEB4-203ENST00000517880 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
CPEB4-203ENST00000517880 ARHGEF5Q12774 1597 aa15.51■□□□□ 0.07
CPEB4-203ENST00000517880 PREX2Q70Z35 1606 aa15.51■□□□□ 0.07
CPEB4-203ENST00000517880 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
CPEB4-203ENST00000517880 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
CPEB4-203ENST00000517880 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
CPEB4-203ENST00000517880 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
CPEB4-203ENST00000517880 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
CPEB4-203ENST00000517880 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
CPEB4-203ENST00000517880 PLEKHH2Q8IVE3 1493 aa15.49■□□□□ 0.07
CPEB4-203ENST00000517880 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
CPEB4-203ENST00000517880 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
CPEB4-203ENST00000517880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
CPEB4-203ENST00000517880 KDM6BO15054 1643 aa15.47■□□□□ 0.07
CPEB4-203ENST00000517880 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
CPEB4-203ENST00000517880 KIAA1107Q9UPP5 1409 aa15.46■□□□□ 0.07
CPEB4-203ENST00000517880 TONSLQ96HA7 1378 aa15.46■□□□□ 0.06
CPEB4-203ENST00000517880 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
CPEB4-203ENST00000517880 C9orf84Q5VXU9 1444 aa15.45■□□□□ 0.06
CPEB4-203ENST00000517880 MYO5CQ9NQX4 1742 aa15.45■□□□□ 0.06
CPEB4-203ENST00000517880 CCDC141Q6ZP82 1450 aa15.44■□□□□ 0.06
CPEB4-203ENST00000517880 SAMD9LQ8IVG5 1584 aa15.44■□□□□ 0.06
CPEB4-203ENST00000517880 PLCH2O75038 1416 aa15.43■□□□□ 0.06
CPEB4-203ENST00000517880 TTC37Q6PGP7 1564 aa15.43■□□□□ 0.06
CPEB4-203ENST00000517880 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
CPEB4-203ENST00000517880 ARAP3Q8WWN8 1544 aa15.42■□□□□ 0.06
CPEB4-203ENST00000517880 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPEB4-203ENST00000517880 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
CPEB4-203ENST00000517880 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
CPEB4-203ENST00000517880 ANKRD50Q9ULJ7 1429 aa15.41■□□□□ 0.06
CPEB4-203ENST00000517880 KCNH8Q96L42 1107 aa15.41■□□□□ 0.06
CPEB4-203ENST00000517880 DENND4BO75064 1496 aaPredicted RBP15.41■□□□□ 0.06
CPEB4-203ENST00000517880 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
CPEB4-203ENST00000517880 WDR7Q9Y4E6 1490 aa15.38■□□□□ 0.05
CPEB4-203ENST00000517880 ANKRD30BQ9BXX2 1392 aa15.37■□□□□ 0.05
CPEB4-203ENST00000517880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.053e-8■□□□□ 8.6
CPEB4-203ENST00000517880 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
CPEB4-203ENST00000517880 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
CPEB4-203ENST00000517880 PZPP20742 1482 aa15.35■□□□□ 0.05
CPEB4-203ENST00000517880 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
CPEB4-203ENST00000517880 SYCP2Q9BX26 1530 aa15.34■□□□□ 0.05
CPEB4-203ENST00000517880 PLXNC1O60486 1568 aa15.33■□□□□ 0.04
CPEB4-203ENST00000517880 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
CPEB4-203ENST00000517880 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
CPEB4-203ENST00000517880 NUP155O75694 1391 aa15.3■□□□□ 0.04
CPEB4-203ENST00000517880 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
CPEB4-203ENST00000517880 ABCC1P33527 1531 aa15.3■□□□□ 0.04
CPEB4-203ENST00000517880 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
CPEB4-203ENST00000517880 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
CPEB4-203ENST00000517880 PKD2Q13563 968 aa15.28■□□□□ 0.04
CPEB4-203ENST00000517880 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
CPEB4-203ENST00000517880 L3MBTL2Q969R5 705 aa15.26■□□□□ 0.03
CPEB4-203ENST00000517880 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
CPEB4-203ENST00000517880 MIER1Q8N108 512 aa15.25■□□□□ 0.03
CPEB4-203ENST00000517880 UNC13BO14795 1591 aa15.24■□□□□ 0.03
CPEB4-203ENST00000517880 FANCAO15360 1455 aa15.24■□□□□ 0.03
CPEB4-203ENST00000517880 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
CPEB4-203ENST00000517880 TRAPPC8Q9Y2L5 1435 aa15.22■□□□□ 0.03
CPEB4-203ENST00000517880 TEX14Q8IWB6 1497 aa15.21■□□□□ 0.02
CPEB4-203ENST00000517880 FAM135AQ9P2D6 1515 aa15.2■□□□□ 0.02
CPEB4-203ENST00000517880 CFAP74Q9C0B2 1584 aa15.2■□□□□ 0.02
CPEB4-203ENST00000517880 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms