RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
SPIDR-203ENST00000517693 DAPK1P53355 1430 aa17.35■□□□□ 0.37
SPIDR-203ENST00000517693 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
SPIDR-203ENST00000517693 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
SPIDR-203ENST00000517693 NAIPQ13075 1403 aa17.33■□□□□ 0.37
SPIDR-203ENST00000517693 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.37
SPIDR-203ENST00000517693 PREX2Q70Z35 1606 aa17.31■□□□□ 0.36
SPIDR-203ENST00000517693 ABCC5O15440 1437 aa17.29■□□□□ 0.36
SPIDR-203ENST00000517693 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
SPIDR-203ENST00000517693 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-203ENST00000517693 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
SPIDR-203ENST00000517693 CROCC2H7BZ55 1655 aa17.28■□□□□ 0.36
SPIDR-203ENST00000517693 MYO5CQ9NQX4 1742 aa17.26■□□□□ 0.35
SPIDR-203ENST00000517693 ARHGEF5Q12774 1597 aa17.26■□□□□ 0.35
SPIDR-203ENST00000517693 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
SPIDR-203ENST00000517693 PLEKHH2Q8IVE3 1493 aa17.25■□□□□ 0.35
SPIDR-203ENST00000517693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.25■□□□□ 0.35
SPIDR-203ENST00000517693 MAPKBP1O60336 1514 aa17.24■□□□□ 0.35
SPIDR-203ENST00000517693 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
SPIDR-203ENST00000517693 TTC37Q6PGP7 1564 aa17.23■□□□□ 0.35
SPIDR-203ENST00000517693 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
SPIDR-203ENST00000517693 CDC42BPBQ9Y5S2 1711 aa17.22■□□□□ 0.35
SPIDR-203ENST00000517693 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
SPIDR-203ENST00000517693 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
SPIDR-203ENST00000517693 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
SPIDR-203ENST00000517693 ARAP3Q8WWN8 1544 aa17.21■□□□□ 0.35
SPIDR-203ENST00000517693 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
SPIDR-203ENST00000517693 WDR7Q9Y4E6 1490 aa17.21■□□□□ 0.35
SPIDR-203ENST00000517693 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
SPIDR-203ENST00000517693 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
SPIDR-203ENST00000517693 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
SPIDR-203ENST00000517693 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
SPIDR-203ENST00000517693 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
SPIDR-203ENST00000517693 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
SPIDR-203ENST00000517693 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
SPIDR-203ENST00000517693 KIAA1107Q9UPP5 1409 aa17.18■□□□□ 0.34
SPIDR-203ENST00000517693 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
SPIDR-203ENST00000517693 PLCH2O75038 1416 aa17.17■□□□□ 0.34
SPIDR-203ENST00000517693 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
SPIDR-203ENST00000517693 MBD5Q9P267 1494 aa17.14■□□□□ 0.34
SPIDR-203ENST00000517693 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.33
SPIDR-203ENST00000517693 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
SPIDR-203ENST00000517693 KCNH8Q96L42 1107 aa17.13■□□□□ 0.33
SPIDR-203ENST00000517693 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
SPIDR-203ENST00000517693 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
SPIDR-203ENST00000517693 TRIM52Q96A61 297 aa17.11■□□□□ 0.33
SPIDR-203ENST00000517693 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
SPIDR-203ENST00000517693 KDM6BO15054 1643 aa17.09■□□□□ 0.33
SPIDR-203ENST00000517693 ANKRD50Q9ULJ7 1429 aa17.09■□□□□ 0.33
SPIDR-203ENST00000517693 ABCC1P33527 1531 aa17.08■□□□□ 0.33
SPIDR-203ENST00000517693 PLXNC1O60486 1568 aa17.07■□□□□ 0.32
SPIDR-203ENST00000517693 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPIDR-203ENST00000517693 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
SPIDR-203ENST00000517693 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-203ENST00000517693 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
SPIDR-203ENST00000517693 MPHOSPH9Q99550 1183 aa17.04■□□□□ 0.32
SPIDR-203ENST00000517693 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
SPIDR-203ENST00000517693 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
SPIDR-203ENST00000517693 FANCAO15360 1455 aa17.02■□□□□ 0.31
SPIDR-203ENST00000517693 NEUROD1Q13562 356 aa17■□□□□ 0.31
SPIDR-203ENST00000517693 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
SPIDR-203ENST00000517693 DUOX2Q9NRD8 1548 aa17■□□□□ 0.31
SPIDR-203ENST00000517693 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
SPIDR-203ENST00000517693 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
SPIDR-203ENST00000517693 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
SPIDR-203ENST00000517693 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
SPIDR-203ENST00000517693 PZPP20742 1482 aa16.98■□□□□ 0.31
SPIDR-203ENST00000517693 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
SPIDR-203ENST00000517693 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
SPIDR-203ENST00000517693 ADGRL1O94910 1474 aa16.96■□□□□ 0.31
SPIDR-203ENST00000517693 UNC13BO14795 1591 aa16.94■□□□□ 0.3
SPIDR-203ENST00000517693 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
SPIDR-203ENST00000517693 NUP155O75694 1391 aa16.93■□□□□ 0.3
SPIDR-203ENST00000517693 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
SPIDR-203ENST00000517693 CD109Q6YHK3 1445 aa16.93■□□□□ 0.3
SPIDR-203ENST00000517693 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-203ENST00000517693 TRAPPC8Q9Y2L5 1435 aa16.93■□□□□ 0.3
SPIDR-203ENST00000517693 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
SPIDR-203ENST00000517693 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
SPIDR-203ENST00000517693 PPP1R15AO75807 674 aaPredicted RBP16.91■□□□□ 0.3
SPIDR-203ENST00000517693 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
SPIDR-203ENST00000517693 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
SPIDR-203ENST00000517693 ZNF518AQ6AHZ1 1483 aa16.9■□□□□ 0.3
SPIDR-203ENST00000517693 NEO1Q92859 1461 aa16.9■□□□□ 0.3
SPIDR-203ENST00000517693 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
SPIDR-203ENST00000517693 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
SPIDR-203ENST00000517693 GLI2P10070 1586 aa16.89■□□□□ 0.29
SPIDR-203ENST00000517693 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SPIDR-203ENST00000517693 FAM135AQ9P2D6 1515 aa16.87■□□□□ 0.29
SPIDR-203ENST00000517693 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
SPIDR-203ENST00000517693 PKD2Q13563 968 aa16.86■□□□□ 0.29
SPIDR-203ENST00000517693 EIF2AK4Q9P2K8 1649 aaKnown RBP16.85■□□□□ 0.29
SPIDR-203ENST00000517693 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
SPIDR-203ENST00000517693 POGZQ7Z3K3 1410 aa16.83■□□□□ 0.29
SPIDR-203ENST00000517693 KDM5CP41229 1560 aa16.83■□□□□ 0.28
SPIDR-203ENST00000517693 AFAP1Q8N556 730 aa16.82■□□□□ 0.28
SPIDR-203ENST00000517693 FOXD1Q16676 465 aa16.81■□□□□ 0.28
SPIDR-203ENST00000517693 TEX14Q8IWB6 1497 aa16.81■□□□□ 0.28
SPIDR-203ENST00000517693 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
SPIDR-203ENST00000517693 HECW2Q9P2P5 1572 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms