RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 TCOF1Q13428 1488 aaKnown RBP4.75□□□□□ -1.65
RNU1-48P-201ENST00000516400 UGGT2Q9NYU1 1516 aa4.74□□□□□ -1.65
RNU1-48P-201ENST00000516400 IQGAP2Q13576 1575 aa4.74□□□□□ -1.65
RNU1-48P-201ENST00000516400 ARID4BQ4LE39 1312 aaPredicted RBP4.73□□□□□ -1.65
RNU1-48P-201ENST00000516400 CARMIL2Q6F5E8 1435 aa4.73□□□□□ -1.65
RNU1-48P-201ENST00000516400 KIAA0556O60303 1618 aa4.73□□□□□ -1.65
RNU1-48P-201ENST00000516400 KCNH8Q96L42 1107 aa4.73□□□□□ -1.65
RNU1-48P-201ENST00000516400 HECW1Q76N89 1606 aa4.72□□□□□ -1.65
RNU1-48P-201ENST00000516400 PLPPR3Q6T4P5 718 aa4.72□□□□□ -1.65
RNU1-48P-201ENST00000516400 RAPGEF2Q9Y4G8 1499 aa4.72□□□□□ -1.65
RNU1-48P-201ENST00000516400 SETBP1Q9Y6X0 1596 aa4.72□□□□□ -1.65
RNU1-48P-201ENST00000516400 ZNF142P52746 1687 aaPredicted RBP4.72□□□□□ -1.65
RNU1-48P-201ENST00000516400 POGZQ7Z3K3 1410 aa4.72□□□□□ -1.65
RNU1-48P-201ENST00000516400 VWDEQ8N2E2 1590 aa4.71□□□□□ -1.66
RNU1-48P-201ENST00000516400 MAGI2Q86UL8 1455 aa4.71□□□□□ -1.66
RNU1-48P-201ENST00000516400 ZFYVE16Q7Z3T8 1539 aa4.71□□□□□ -1.66
RNU1-48P-201ENST00000516400 TTBK1Q5TCY1 1321 aaPredicted RBP4.71□□□□□ -1.66
RNU1-48P-201ENST00000516400 NCKAP5LQ9HCH0 1330 aa4.71□□□□□ -1.66
RNU1-48P-201ENST00000516400 NEURL4Q96JN8 1562 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 PLA2R1Q13018 1463 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 SUPT6HQ7KZ85 1726 aaKnown RBP4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 MSH5O43196 834 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 PIP4K2BP78356 416 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 CPS1P31327 1500 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 AKNAQ7Z591 1439 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 TRAPPC8Q9Y2L5 1435 aa4.7□□□□□ -1.66
RNU1-48P-201ENST00000516400 ATP10BO94823 1461 aa4.69□□□□□ -1.66
RNU1-48P-201ENST00000516400 EFCAB5A4FU69 1503 aa4.69□□□□□ -1.66
RNU1-48P-201ENST00000516400 TOM1O60784 492 aa4.69□□□□□ -1.66
RNU1-48P-201ENST00000516400 ATP10AO60312 1499 aa4.69□□□□□ -1.66
RNU1-48P-201ENST00000516400 DENND4BO75064 1496 aaPredicted RBP4.69□□□□□ -1.66
RNU1-48P-201ENST00000516400 REREQ9P2R6 1566 aa4.68□□□□□ -1.66
RNU1-48P-201ENST00000516400 POLR1AO95602 1720 aaPredicted RBP4.68□□□□□ -1.66
RNU1-48P-201ENST00000516400 SHANK2Q9UPX8 1470 aa4.68□□□□□ -1.66
RNU1-48P-201ENST00000516400 MROH2AA6NES4 1674 aa4.67□□□□□ -1.66
RNU1-48P-201ENST00000516400 PTPRKQ15262 1439 aa4.67□□□□□ -1.66
RNU1-48P-201ENST00000516400 MLECQ14165 292 aa4.67□□□□□ -1.66
RNU1-48P-201ENST00000516400 LRP5O75197 1615 aa4.67□□□□□ -1.66
RNU1-48P-201ENST00000516400 PKD2Q13563 968 aa4.66□□□□□ -1.66
RNU1-48P-201ENST00000516400 AGLP35573 1532 aa4.66□□□□□ -1.66
RNU1-48P-201ENST00000516400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.66□□□□□ -1.66
RNU1-48P-201ENST00000516400 LRRC7Q96NW7 1537 aa4.66□□□□□ -1.66
RNU1-48P-201ENST00000516400 DNMT1P26358 1616 aaKnown RBP4.65□□□□□ -1.66
RNU1-48P-201ENST00000516400 MYO3AQ8NEV4 1616 aa4.65□□□□□ -1.66
RNU1-48P-201ENST00000516400 NPATQ14207 1427 aa4.64□□□□□ -1.67
RNU1-48P-201ENST00000516400 C9orf84Q5VXU9 1444 aa4.64□□□□□ -1.67
RNU1-48P-201ENST00000516400 CEP170BQ9Y4F5 1589 aaPredicted RBP4.64□□□□□ -1.67
RNU1-48P-201ENST00000516400 RNF17Q9BXT8 1623 aaKnown RBP4.64□□□□□ -1.67
RNU1-48P-201ENST00000516400 CDK12Q9NYV4 1490 aaPredicted RBP4.63□□□□□ -1.67
RNU1-48P-201ENST00000516400 KDM5CP41229 1560 aa4.63□□□□□ -1.67
RNU1-48P-201ENST00000516400 DIP2CQ9Y2E4 1556 aa4.63□□□□□ -1.67
RNU1-48P-201ENST00000516400 CARMIL1Q5VZK9 1371 aa4.63□□□□□ -1.67
RNU1-48P-201ENST00000516400 CFAP74Q9C0B2 1584 aa4.62□□□□□ -1.67
RNU1-48P-201ENST00000516400 ZC3H13Q5T200 1668 aaKnown RBP4.62□□□□□ -1.67
RNU1-48P-201ENST00000516400 SCAF1Q9H7N4 1312 aaKnown RBP4.62□□□□□ -1.67
RNU1-48P-201ENST00000516400 FAM135BQ49AJ0 1406 aa4.62□□□□□ -1.67
RNU1-48P-201ENST00000516400 MED14O60244 1454 aa4.62□□□□□ -1.67
RNU1-48P-201ENST00000516400 LRP6O75581 1613 aa4.61□□□□□ -1.67
RNU1-48P-201ENST00000516400 ABCA6Q8N139 1617 aa4.61□□□□□ -1.67
RNU1-48P-201ENST00000516400 PPP6R1Q9UPN7 881 aa4.61□□□□□ -1.67
RNU1-48P-201ENST00000516400 ROBO1Q9Y6N7 1651 aa4.61□□□□□ -1.67
RNU1-48P-201ENST00000516400 SYNMO15061 1565 aa4.6□□□□□ -1.67
RNU1-48P-201ENST00000516400 DEPDC5O75140 1603 aa4.6□□□□□ -1.67
RNU1-48P-201ENST00000516400 RAPGEF6Q8TEU7 1601 aa4.6□□□□□ -1.67
RNU1-48P-201ENST00000516400 CTTNBP2Q8WZ74 1663 aa4.6□□□□□ -1.67
RNU1-48P-201ENST00000516400 KIDINS220Q9ULH0 1771 aa4.6□□□□□ -1.67
RNU1-48P-201ENST00000516400 ZMYM3Q14202 1370 aa4.59□□□□□ -1.67
RNU1-48P-201ENST00000516400 CLTCQ00610 1675 aaKnown RBP4.58□□□□□ -1.68
RNU1-48P-201ENST00000516400 COL16A1Q07092 1604 aaPredicted RBP4.58□□□□□ -1.68
RNU1-48P-201ENST00000516400 SCAPERQ9BY12 1400 aa4.58□□□□□ -1.68
RNU1-48P-201ENST00000516400 RBM33Q96EV2 1170 aaKnown RBP4.58□□□□□ -1.68
RNU1-48P-201ENST00000516400 PCNTO95613 3336 aa4.57□□□□□ -1.68
RNU1-48P-201ENST00000516400 IQGAP1P46940 1657 aa4.57□□□□□ -1.68
RNU1-48P-201ENST00000516400 A2ML1A8K2U0 1454 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 BCL9LQ86UU0 1499 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 RGS12O14924 1447 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 PLCH2O75038 1416 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 KIF27Q86VH2 1401 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 CNTLNQ9NXG0 1405 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 PHLPP1O60346 1717 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 TRIM52Q96A61 297 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 SHPRHQ149N8 1683 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 NHSL1Q5SYE7 1610 aa4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 CDK13Q14004 1512 aaKnown RBP4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 NUP153P49790 1475 aaKnown RBP4.56□□□□□ -1.68
RNU1-48P-201ENST00000516400 CDC42BPBQ9Y5S2 1711 aa4.55□□□□□ -1.68
RNU1-48P-201ENST00000516400 GOLGB1Q14789 3259 aaKnown RBP4.54□□□□□ -1.68
RNU1-48P-201ENST00000516400 DIP2AQ14689 1571 aa4.54□□□□□ -1.68
RNU1-48P-201ENST00000516400 PIAS4Q8N2W9 510 aaPredicted RBP4.54□□□□□ -1.68
RNU1-48P-201ENST00000516400 ZRANB1Q9UGI0 708 aa4.54□□□□□ -1.68
RNU1-48P-201ENST00000516400 MAP3K1Q13233 1512 aa4.54□□□□□ -1.68
RNU1-48P-201ENST00000516400 MYO5CQ9NQX4 1742 aa4.53□□□□□ -1.68
RNU1-48P-201ENST00000516400 SLC34A2O95436 690 aa4.53□□□□□ -1.68
RNU1-48P-201ENST00000516400 RXRBP28702 533 aa4.53□□□□□ -1.68
RNU1-48P-201ENST00000516400 AFAP1Q8N556 730 aa4.53□□□□□ -1.68
RNU1-48P-201ENST00000516400 GOLGA3Q08378 1498 aa4.53□□□□□ -1.68
RNU1-48P-201ENST00000516400 ITSN2Q9NZM3 1697 aa4.53□□□□□ -1.68
RNU1-48P-201ENST00000516400 SAMD9Q5K651 1589 aa4.53□□□□□ -1.69
RNU1-48P-201ENST00000516400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms