RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
CAST-244ENST00000515663 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
CAST-244ENST00000515663 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
CAST-244ENST00000515663 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
CAST-244ENST00000515663 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
CAST-244ENST00000515663 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
CAST-244ENST00000515663 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
CAST-244ENST00000515663 ITGAEP38570 1179 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 ABCC5O15440 1437 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 PLCH2O75038 1416 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
CAST-244ENST00000515663 DAPK1P53355 1430 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 TTC37Q6PGP7 1564 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
CAST-244ENST00000515663 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
CAST-244ENST00000515663 DMRT2Q9Y5R5 561 aa13.22□□□□□ -0.29
CAST-244ENST00000515663 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
CAST-244ENST00000515663 CDC42BPBQ9Y5S2 1711 aa13.2□□□□□ -0.3
CAST-244ENST00000515663 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
CAST-244ENST00000515663 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
CAST-244ENST00000515663 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
CAST-244ENST00000515663 NAIPQ13075 1403 aa13.19□□□□□ -0.3
CAST-244ENST00000515663 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
CAST-244ENST00000515663 ABCA9Q8IUA7 1624 aa13.19□□□□□ -0.3
CAST-244ENST00000515663 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
CAST-244ENST00000515663 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
CAST-244ENST00000515663 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
CAST-244ENST00000515663 ARHGEF5Q12774 1597 aa13.18□□□□□ -0.3
CAST-244ENST00000515663 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
CAST-244ENST00000515663 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
CAST-244ENST00000515663 MYO5CQ9NQX4 1742 aa13.17□□□□□ -0.3
CAST-244ENST00000515663 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
CAST-244ENST00000515663 ADGRL2O95490 1459 aa13.17□□□□□ -0.3
CAST-244ENST00000515663 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
CAST-244ENST00000515663 SHANK2Q9UPX8 1470 aa13.17□□□□□ -0.3
CAST-244ENST00000515663 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
CAST-244ENST00000515663 DHX57Q6P158 1386 aaKnown RBP13.16□□□□□ -0.3
CAST-244ENST00000515663 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
CAST-244ENST00000515663 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
CAST-244ENST00000515663 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
CAST-244ENST00000515663 ACIN1Q9UKV3 1341 aaKnown RBP13.14□□□□□ -0.31
CAST-244ENST00000515663 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
CAST-244ENST00000515663 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
CAST-244ENST00000515663 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
CAST-244ENST00000515663 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
CAST-244ENST00000515663 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
CAST-244ENST00000515663 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAST-244ENST00000515663 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
CAST-244ENST00000515663 ARHGEF12Q9NZN5 1544 aa13.11□□□□□ -0.31
CAST-244ENST00000515663 GLI2P10070 1586 aa13.11□□□□□ -0.31
CAST-244ENST00000515663 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
CAST-244ENST00000515663 ABCC1P33527 1531 aa13.1□□□□□ -0.31
CAST-244ENST00000515663 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
CAST-244ENST00000515663 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
CAST-244ENST00000515663 SYCP2Q9BX26 1530 aa13.09□□□□□ -0.31
CAST-244ENST00000515663 TSPY4P0CV99 314 aa13.09□□□□□ -0.31
CAST-244ENST00000515663 TSPY10P0CW01 314 aa13.09□□□□□ -0.31
CAST-244ENST00000515663 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
CAST-244ENST00000515663 FANCAO15360 1455 aa13.08□□□□□ -0.31
CAST-244ENST00000515663 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
CAST-244ENST00000515663 ADGBQ8N7X0 1667 aa13.07□□□□□ -0.32
CAST-244ENST00000515663 RTEL1-TNFRSF6BF6WH68 1400 aa13.06□□□□□ -0.32
CAST-244ENST00000515663 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
CAST-244ENST00000515663 KDM6BO15054 1643 aa13.04□□□□□ -0.32
CAST-244ENST00000515663 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
CAST-244ENST00000515663 NEO1Q92859 1461 aa13.03□□□□□ -0.32
CAST-244ENST00000515663 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.32
CAST-244ENST00000515663 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.32
CAST-244ENST00000515663 PLXNC1O60486 1568 aa13.02□□□□□ -0.32
CAST-244ENST00000515663 CFAP74Q9C0B2 1584 aa13.02□□□□□ -0.32
CAST-244ENST00000515663 ADGRL1O94910 1474 aa13.02□□□□□ -0.33
CAST-244ENST00000515663 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
CAST-244ENST00000515663 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
CAST-244ENST00000515663 DENND4BO75064 1496 aaPredicted RBP12.99□□□□□ -0.33
CAST-244ENST00000515663 AFAP1Q8N556 730 aa12.99□□□□□ -0.33
CAST-244ENST00000515663 SPAG9O60271 1321 aaKnown RBP12.98□□□□□ -0.33
CAST-244ENST00000515663 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
CAST-244ENST00000515663 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
CAST-244ENST00000515663 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
CAST-244ENST00000515663 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
CAST-244ENST00000515663 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
CAST-244ENST00000515663 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
CAST-244ENST00000515663 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
CAST-244ENST00000515663 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.33
CAST-244ENST00000515663 KDM5CP41229 1560 aa12.96□□□□□ -0.33
CAST-244ENST00000515663 ERBINQ96RT1 1412 aa12.95□□□□□ -0.34
CAST-244ENST00000515663 PZPP20742 1482 aa12.95□□□□□ -0.34
CAST-244ENST00000515663 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
CAST-244ENST00000515663 TIMELESSQ9UNS1 1208 aa12.95□□□□□ -0.34
CAST-244ENST00000515663 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
CAST-244ENST00000515663 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
CAST-244ENST00000515663 TEX14Q8IWB6 1497 aa12.92□□□□□ -0.34
CAST-244ENST00000515663 PPRC1Q5VV67 1664 aaKnown RBP12.92□□□□□ -0.34
CAST-244ENST00000515663 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
CAST-244ENST00000515663 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
CAST-244ENST00000515663 UNC13BO14795 1591 aa12.9□□□□□ -0.34
CAST-244ENST00000515663 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms